Protein Interaction Network Analysis (PINA) platform is an integrated platform for protein interaction network construction, filtering, analysis, visualization and management. It integrates protein-protein interaction data from six public curated databases and builds a complete, non-redundant protein interaction dataset for six model organisms.

This resource is a provider. This means that while it may have its own prefix, it actually reuses the identifiers provided by the uniprot prefix. For all use cases, you should use uniprot instead of pina.

Prefix

pina

Keywords

data visualization life science

Links

Homepage

Contact

Jianmin Wu   0000-0002-8876-128X

Pattern for Local Unique Identifiers

Local identifiers in Protein Interaction Network Analysis should match this regular expression:
^([A-N,R-Z][0-9][A-Z][A-Z, 0-9][A-Z, 0-9][0-9])|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])$

Example Local Unique Identifier

Q13485   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Protein Interaction Network Analysis should match this regular expression:
^pina:([A-N,R-Z][0-9][A-Z][A-Z, 0-9][A-Z, 0-9][0-9])|([O,P,Q][0-9][A-Z, 0-9][A-Z, 0-9][A-Z, 0-9][0-9])$

Example CURIE

pina:Q13485

Publications

• 2021 PINA 3.0: mining cancer interactome
• 2011 PINA v2.0: mining interactome modules
• 2008 Integrated network analysis platform for protein-protein interactions

A summary of the relations in the Bioregistry schema can be found here.

Provides

uniprot

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 3 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier Q13485 is used to demonstrate the providers available for Protein Interaction Network Analysis. A guide for curating additional providers can be found here.