Registry NCI Pathway Interaction Database: Pathway

The Pathway Interaction Database is a highly-structured, curated collection of information about known human biomolecular interactions and key cellular processes assembled into signaling pathways. This datatype provides access to pathway information.

Prefix
pid.pathway
Alternative Prefixes
pid
Keywords
gene life science pathway protein small molecule
Links
Homepage
Contact
Carl F. Schaefer   0000-0002-5941-3390
Pattern for Local Unique Identifiers

Local identifiers in NCI Pathway Interaction Database: Pathway should match this regular expression:
^\b[0-9a-f]{8}\b-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-\b[0-9a-f]{12}\b$

Example Local Unique Identifier
eff796f3-6195-11e5-8ac5-06603eb7f303   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from NCI Pathway Interaction Database: Pathway should match this regular expression:
^pid\.pathway:\b[0-9a-f]{8}\b-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-\b[0-9a-f]{12}\b$

Example CURIE
pid.pathway:eff796f3-6195-11e5-8ac5-06603eb7f303
Publications
2008 PID: the Pathway Interaction Database
Metaregistry NCI Pathway Interaction Database: Pathway

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 5 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext PID.PATHWAY
EDAM EDAM Ontology logo edam 2344
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.ncgh1j
Identifiers.org Identifiers.org logo miriam pid.pathway
N2T Name-to-Thing logo n2t pid.pathway
Pathguide Pathguide logo pathguide 119
Prefix Commons Prefix Commons logo prefixcommons pid
Providers

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier eff796f3-6195-11e5-8ac5-06603eb7f303 is used to demonstrate the providers available for NCI Pathway Interaction Database: Pathway. A guide for curating additional providers can be found here.

Name Metaprefix URI
NCI Pathway Interaction Database: Pathway pid.pathway http://pid.nci.nih.gov/search/pathway_landing.shtml?what=graphic&jpg=on&pathway_id=eff796f3-6195-11e5-8ac5-06603eb7f303
Bioregistry bioregistry https://bioregistry.io/pid.pathway:eff796f3-6195-11e5-8ac5-06603eb7f303
Identifiers.org miriam https://identifiers.org/pid.pathway:eff796f3-6195-11e5-8ac5-06603eb7f303
Name-to-Thing n2t https://n2t.net/pid.pathway:eff796f3-6195-11e5-8ac5-06603eb7f303
Extra Providers

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/pid:eff796f3-6195-11e5-8ac5-06603eb7f303