PepBank is a database of peptides based on sequence text mining and public peptide data sources. Only peptides that are 20 amino acids or shorter are stored. Only peptides with available sequences are stored.
- Comment
This resource doesn't exist on the web anymore
- Prefix
pepbank- Keywords
- protein structure
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
- Missing LUI pattern
- Example Local Unique Identifier
- 21877 Resolve
- Example CURIE
- pepbank:21877
- Reviewer
- Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Metaregistry PepBank Peptide Database
The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for this resource with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
Pathguide
|
pathguide |
235
|
|
Prefix Commons
|
prefixcommons |
pepbank
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier 21877 is used to demonstrate the providers
available for PepBank Peptide Database. A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| PepBank Peptide Database | pepbank |
http://pepbank.mgh.harvard.edu/interactions/details/21877 |
| Bioregistry | bioregistry |
https://bioregistry.io/pepbank:21877 |
Extra Providers
Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/pepbank:21877 |