The Protein Ensemble Database is an open access database for the deposition of structural ensembles, including intrinsically disordered proteins.
- Prefix
ped- Keywords
- botany plant genetics
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in Protein Ensemble Database should match this regular expression:
^PED\d{5}$ - Example Local Unique Identifier
- PED00037 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from Protein Ensemble Database should match this regular expression:
^ped:PED\d{5}$ - Example CURIE
- ped:PED00037
- Publications
- 2019 Plant editosome database: a curated database of RNA editosome in plants
Ontology
A summary of the relations in the Bioregistry schema can be found here.
-
Has Parts (
bfo:0000051) - ped.ensemble
Metaregistry Protein Ensemble Database
The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 3 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
FAIRSharing
|
fairsharing |
FAIRsharing.4ef690
|
|
Integbio
|
integbio |
nbdc02490
|
|
Identifiers.org
|
miriam |
ped
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
ped:PED00037
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
| Name | Metaprefix | URI |
|---|---|---|
| Protein Ensemble Database | ped |
https://proteinensemble.org/PED00037 |
| Bioregistry | bioregistry |
https://bioregistry.io/ped:PED00037 |
| Identifiers.org | miriam |
https://identifiers.org/ped:PED00037 |