Registry Platynereis Developmental Stages

Life cycle stages for Platynereis dumerilii

Prefix: pdumdv
Preferred Prefix: PdumDv
Alternative Prefixes: PdumDv
Keywords: developmental biology life cycle stage life science obo ontology
License: CC-BY-3.0
Links: Homepage Repository OBO OWL
Contact: Frédéric Bastian 0000-0002-9415-5104 fbastian
Pattern for Local Unique Identifiers: Local identifiers in Platynereis Developmental Stages should match this regular expression:
^\d{7}$
Example Local Unique Identifier: 0001410 Resolve
Pattern for CURIES: Compact URIs (CURIEs) constructed from Platynereis Developmental Stages should match this regular expression:
^PdumDv:\d{7}$
Example CURIE: PdumDv:0001410

Metaregistry Platynereis Developmental Stages

The metaregistry provides mappings between the Bioregistry and other registries. There are 7 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`PDUMDV`
BioContext	`biocontext`	`PDUMDV`
BioPortal	`bioportal`	`PDUMDV`
FAIRSharing	`fairsharing`	`FAIRsharing.493qns`
OBO Foundry	`obofoundry`	`pdumdv`
OLS	`ols`	`pdumdv`
OntoBee	`ontobee`	`PdumDv`

RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/PdumDv_$1

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 0001410 is used to demonstrate the providers available for Platynereis Developmental Stages. Some providers may use a different example, which is displayed in the table below. A guide for curating additional providers can be found here.

Name	Metaprefix	URI
Platynereis Developmental Stages	`pdumdv`	http://purl.obolibrary.org/obo/PdumDv_0001410
Platynereis Developmental Stages (RDF)	`rdf`	http://purl.obolibrary.org/obo/PdumDv_0001410
Bioregistry	`bioregistry`	https://bioregistry.io/pdumdv:0001410
OBO Foundry	`obofoundry`	http://purl.obolibrary.org/obo/PdumDv_0001410
Ontology Lookup Service	`ols`	https://www.ebi.ac.uk/ols4/ontologies/pdumdv/terms?iri=http://purl.obolibrary.org/obo/PdumDv_0001410
BioPortal Prefixes	`bioportal`	https://bioportal.bioontology.org/ontologies/PDUMDV/?p=classes&conceptid=http://purl.obolibrary.org/obo/PdumDv_0001410

Normalize prefixes. This can be any capitalization or punctuation variant of the synonyms listed below.

>>> import bioregistry as br
>>> br.normalize_prefix("PdumDv")
'pdumdv'

Get all synonyms:

>>> import bioregistry as br
>>> br.get_synonyms("pdumdv")
{'PdumDv'}

This name annotation was originally annotated in OBO Foundry and is redistributed under the CC0 license.

Get the name:

>>> import bioregistry as br
>>> br.get_name("pdumdv")
'Platynereis Developmental Stages'

Get the license:

>>> import bioregistry as br
>>> br.get_license("pdumdv")
'CC-BY-3.0'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("pdumdv")
'https://github.com/obophenotype/developmental-stage-ontologies/wiki/PdumDv'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("pdumdv")
'https://github.com/obophenotype/developmental-stage-ontologies'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("pdumdv")
'http://purl.obolibrary.org/obo/pdumdv.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("pdumdv")
'http://purl.obolibrary.org/obo/pdumdv.owl'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("pdumdv")
'Frédéric Bastian'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("pdumdv")
'frederic.bastian@unil.ch'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("pdumdv")
'fbastian'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("pdumdv")
'0000-0002-9415-5104'