The PANTHER (Protein ANalysis THrough Evolutionary Relationships) Classification System is a resource that classifies genes by their functions, using published scientific experimental evidence and evolutionary relationships to predict function even in the absence of direct experimental evidence. The PANTHER Pathway collection references pathway information, primarily for signaling pathways, each with subfamilies and protein sequences mapped to individual pathway components.
panther.pathway
Local identifiers in PANTHER Pathway should match this
regular expression:
^P\d{5}$
Compact URIs (CURIEs) constructed from PANTHER Pathway should match
this regular expression:
^panther\.pathway:P\d{5}$
A summary of the relations in the Bioregistry schema can be found here.
bfo:0000050
)
The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
PANTHER.PATHWAY
|
|
EDAM | edam |
1161
|
|
Identifiers.org | miriam |
panther.pathway
|
|
N2T | n2t |
panther.pathway
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier P00024
is used to demonstrate the providers
available for PANTHER Pathway. A guide for curating additional providers can be found
here.
Name | Metaprefix | URI |
---|---|---|
PANTHER Pathway | panther.pathway |
http://www.pantherdb.org/pathway/pathwayDiagram.jsp?catAccession=P00024 |
Bioregistry | bioregistry |
https://bioregistry.io/panther.pathway:P00024 |
Identifiers.org | miriam |
https://identifiers.org/panther.pathway:P00024 |
Name-to-Thing | n2t |
https://n2t.net/panther.pathway:P00024 |