OMA (Orthologous MAtrix) is a database that identifies orthologs among publicly available, complete genome sequences. It identifies orthologous relationships which can be accessed either group-wise, where all group members are orthologous to all other group members, or on a sequence-centric basis, where for a given protein all its orthologs in all other species are displayed. This collection references individual protein records.

Prefix

oma.protein

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in OMA Protein should match this regular expression:
^[A-Z0-9]{5}\d+$

Example Local Unique Identifier

HUMAN16963   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from OMA Protein should match this regular expression:
^oma\.protein:[A-Z0-9]{5}\d+$

Example CURIE

oma.protein:HUMAN16963

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier HUMAN16963 is used to demonstrate the providers available for OMA Protein. A guide for curating additional providers can be found here.