OMA (Orthologous MAtrix) is a database that identifies orthologs among publicly available, complete genome sequences. It identifies orthologous relationships which can be accessed either group-wise, where all group members are orthologous to all other group members, or on a sequence-centric basis, where for a given protein all its orthologs in all other species are displayed. This collection references individual protein records.

Prefix
oma.protein
Links
Homepage
Contact
Missing Contact
Pattern
^[A-Z0-9]{5}\d+$
Namespace in Pattern
False
Example Identifier
HUMAN16963   Resolve
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for oma.protein.

Registry Name Metaprefix Metaidentifier
Identifiers.org miriam oma.protein
Name-to-Thing n2t oma.protein
Prefix Commons prefixcommons OMA.PROTEIN
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE oma.protein:HUMAN16963 is used to demonstrate the provides available for oma.protein. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URL
OMA Protein oma.protein https://omabrowser.org/cgi-bin/gateway.pl?f=DisplayEntry&p1=HUMAN16963
Bioregistry bioregistry https://bioregistry.io/oma.protein:HUMAN16963
Identifiers.org miriam https://identifiers.org/oma.protein:HUMAN16963
Name-to-Thing n2t https://n2t.net/oma.protein:HUMAN16963