NONCODE is a database of expression and functional lncRNA (long noncoding RNA) data obtained from microarray studies. LncRNAs have been shown to play key roles in various biological processes such as imprinting control, circuitry controlling pluripotency and differentiation, immune responses and chromosome dynamics. The collection references NONCODE version 3. This was replaced in 2013 by version 4.

Prefix

noncodev3

Keywords

expression nucleotide

Links

Homepage

Contact

Yi Zhao   0000-0001-6049-8347

Pattern for Local Unique Identifiers

Local identifiers in NONCODE v3 should match this regular expression:
^\d+$

Example Local Unique Identifier

377550   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from NONCODE v3 should match this regular expression:
^noncodev3:\d+$

Example CURIE

noncodev3:377550

Publications

2011 NONCODE v3.0: integrative annotation of long noncoding RNAs

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 2 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier 377550 is used to demonstrate the providers available for NONCODE v3. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.