NAPP (Nucleic Acids Phylogenetic Profiling is a clustering method based on conserved noncoding RNA (ncRNA) elements in a bacterial genomes. Short intergenic regions from a reference genome are compared with other genomes to identify RNA rich clusters.

Prefix
napp
Keywords
clustering genomics nucleotide
Links
Homepage
Contact
Daniel Gautheret   0000-0002-1508-8469
Pattern for Local Unique Identifiers

Local identifiers in Nucleic Acids Phylogenetic Profiling should match this regular expression:
^\d+$

Example Local Unique Identifier
351   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Nucleic Acids Phylogenetic Profiling should match this regular expression:
^napp:\d+$

Example CURIE
napp:351
Publications
Metaregistry Nucleic Acids Phylogenetic Profiling

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
BioContext biocontext NAPP
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.vr52p3
Identifiers.org Identifiers.org logo miriam napp
N2T Name-to-Thing logo n2t napp
Prefix Commons Prefix Commons logo prefixcommons napp
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE napp:351 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Nucleic Acids Phylogenetic Profiling napp http://rna.igmors.u-psud.fr/NAPP/Niveau2.php?specie=351
Bioregistry bioregistry https://bioregistry.io/napp:351
Identifiers.org miriam https://identifiers.org/napp:351
Name-to-Thing n2t https://n2t.net/napp:351
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/napp:351