Registry Molecular Modeling Database

The Molecular Modeling Database (MMDB) is a database of experimentally determined structures obtained from the Protein Data Bank (PDB). Since structures are known for a large fraction of all protein families, structure homologs may facilitate inference of biological function, or the identification of binding or catalytic sites.

Prefix
mmdb
Links
Homepage
Contact
Missing Contact
Pattern
^\d{1,5}$
Namespace in Pattern
False
Example Identifier
50885   Resolve
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for mmdb.

Registry Name Metaprefix Metaidentifier
Identifiers.org miriam mmdb
Name-to-Thing n2t mmdb
Prefix Commons prefixcommons MMDB
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE mmdb:50885 is used to demonstrate the provides available for mmdb. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URL
Molecular Modeling Database mmdb http://www.ncbi.nlm.nih.gov/Structure/mmdb/mmdbsrv.cgi?uid=50885
Bioregistry bioregistry https://bioregistry.io/mmdb:50885
Identifiers.org miriam https://identifiers.org/mmdb:50885
Name-to-Thing n2t https://n2t.net/mmdb:50885