The Molecular Modeling Database (MMDB) is a database of experimentally determined structures obtained from the Protein Data Bank (PDB). Since structures are known for a large fraction of all protein families, structure homologs may facilitate inference of biological function, or the identification of binding or catalytic sites.
mmdb
Local identifiers in Molecular Modeling Database should match this
regular expression:
^\d{1,5}$
Compact URIs (CURIEs) constructed from Molecular Modeling Database should match
this regular expression:
^mmdb:\d{1,5}$
The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
MMDB
|
|
EDAM | edam |
2667
|
|
Identifiers.org | miriam |
mmdb
|
|
N2T | n2t |
mmdb
|
|
Pathguide | pathguide |
508
|
|
Prefix Commons | prefixcommons |
mmdb
|
Providers are various services that resolve CURIEs to URLs. The example CURIE
mmdb:50885
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Additional providers curated in the Bioregistry are listed here.
Code | Name | URL |
---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/mmdb:50885 |