MassIVE is a community resource developed by the NIH-funded Center for Computational Mass Spectrometry to promote the global, free exchange of mass spectrometry data.

Prefix

massive

Keywords

functional genomics metabolomics metaproteomics omics phenomics proteomics

Links

Homepage Repository

Contact

Mingxun Wang   0000-0001-7647-6097

Pattern for Local Unique Identifiers

Local identifiers in MassIVE should match this regular expression:
^MSV\d+$

Example Local Unique Identifier

MSV000082131   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from MassIVE should match this regular expression:
^massive:MSV\d+$

Example CURIE

massive:MSV000082131

Publications

• 2020 MassIVE.quant: a community resource of quantitative mass spectrometry-based proteomics datasets
• 2020 The ProteomeXchange consortium in 2020: enabling 'big data' approaches in proteomics
• 2018 Assembling the Community-Scale Discoverable Human Proteome
• 2016 The ProteomeXchange consortium in 2017: supporting the cultural change in proteomics public data deposition
• 2016 Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

A summary of the relations in the Bioregistry schema can be found here.

In Collection

Resources mentioned in "Sharing biological data: why, when, and how"

The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 3 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier MSV000082131 is used to demonstrate the providers available for MassIVE. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.