Registry Protein Domains Deprecated

InterPro is a database of protein families, domains and functional sites in which identifiable features found in known proteins can be applied to unknown protein sequences.

Prefix
interpro
Preferred Prefix
interpro
Alternative Prefixes
InterPro IP
Links
Homepage
Contact
interhelp@ebi.ac.uk
Pattern
^IPR\d{6}$
Namespace in Pattern
False
Example Identifier
IPR016380   Resolve
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for interpro.

Registry Name Metaprefix Metaidentifier
Biolink Model Registry biolink interpro
Gene Ontology Registry go InterPro
Identifiers.org miriam interpro
Name-to-Thing n2t interpro
National Center for Biotechnology Information Registry ncbi InterPro
OBO Foundry obofoundry IPR
Prefix Commons prefixcommons INTERPRO
UniProt Cross-ref database uniprot InterPro
Wikidata Property wikidata P2926
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE interpro:IPR016380 is used to demonstrate the provides available for interpro. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URL
Protein Domains interpro https://www.ebi.ac.uk/interpro/entry/IPR016380
Bioregistry bioregistry https://bioregistry.io/interpro:IPR016380
Identifiers.org miriam https://identifiers.org/IPR:IPR016380
OBO Foundry obofoundry http://purl.obolibrary.org/obo/IPR_IPR016380
Name-to-Thing n2t https://n2t.net/interpro:IPR016380
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
CURATOR_REVIEW Bio2RDF http://interpro.bio2rdf.org/describe/?url=http://bio2rdf.org/interpro:IPR016380