The Human Gene Mutation Database (HGMD) collates data on germ-line mutations in nuclear genes associated with human inherited disease. It includes information on single base-pair substitutions in coding, regulatory and splicing-relevant regions; micro-deletions and micro-insertions; indels; triplet repeat expansions as well as gross deletions; insertions; duplications; and complex rearrangements. Each mutation entry is unique, and includes cDNA reference sequences for most genes, splice junction sequences, disease-associated and functional polymorphisms, as well as links to data present in publicly available online locus-specific mutation databases.
hgmd
Local identifiers in Human Gene Mutation Database should match this
regular expression:
^[A-Z_0-9]+$
Compact URIs (CURIEs) constructed from Human Gene Mutation Database should match
this regular expression:
^hgmd:[A-Z_0-9]+$
The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 3 unique external prefixes.
Registry Name | Registry Metaprefix | External Prefix | Curate |
---|---|---|---|
BioContext | biocontext |
HGMD
|
|
EDAM | edam |
3265
|
|
Integbio | integbio |
nbdc00097
|
|
Identifiers.org | miriam |
hgmd
|
|
N2T | n2t |
hgmd
|
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier CALM1
is used to demonstrate the providers
available for Human Gene Mutation Database. A guide for curating additional providers can be found
here.
Name | Metaprefix | URI |
---|---|---|
Human Gene Mutation Database | hgmd |
http://www.hgmd.cf.ac.uk/ac/gene.php?gene=CALM1 |
Bioregistry | bioregistry |
https://bioregistry.io/hgmd:CALM1 |
Identifiers.org | miriam |
https://identifiers.org/hgmd:CALM1 |
Name-to-Thing | n2t |
https://n2t.net/hgmd:CALM1 |