The WikiPatwhays Graphical Pathway Markup Language (GPML) vocabulary.
- Prefix
gpml- Alternative Prefixes
- wikipathways.gpml
- Keywords
- ontology
- License
- CC0-1.0
- Links
- Homepage Repository OWL Request Discussion @wikipathways@fosstodon.org
- Contact
- Egon Willighagen 0000-0001-7542-0286 egonw
- Pattern for Local Unique Identifiers
-
Local identifiers in WikiPathways GPML Vocabulary should match this regular expression:
^[A-Za-z]+$ - Example Local Unique Identifier
- DataNode Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from WikiPathways GPML Vocabulary should match this regular expression:
^gpml:[A-Za-z]+$ - Example CURIE
- gpml:DataNode
- Publications
- 2025 WikiPathways 2024: next generation pathway database
- Contributors
-
- submitter Javier Millán Acosta 0000-0001-5608-781X jmillanacosta
- contributor Benjamin M. Gyori 0000-0001-9439-5346 bgyori
- Reviewer
- Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt
Metaregistry WikiPathways GPML Vocabulary
The metaregistry provides mappings between the Bioregistry and other registries. There are 2 mappings to external registries for this resource with 1 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
AberOWL
|
aberowl |
GPML
|
|
BioPortal
|
bioportal |
GPML
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier DataNode is used to demonstrate the providers
available for WikiPathways GPML Vocabulary. Some providers may use a different example, which is displayed in the table below.
A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| WikiPathways GPML Vocabulary | gpml |
http://vocabularies.wikipathways.org/gpml#DataNode |
| Bioregistry | bioregistry |
https://bioregistry.io/gpml:DataNode |