Genetree displays the maximum likelihood phylogenetic (protein) trees representing the evolutionary history of the genes. These are constructed using the canonical protein for every gene in Ensembl.
- Prefix
genetree- Keywords
- classification gene protein
- Links
- Homepage
- Contact
- Missing Contact
- Pattern for Local Unique Identifiers
-
Local identifiers in GeneTree should match this regular expression:
^ENSGT\d+$ - Example Local Unique Identifier
- ENSGT00550000074763 Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from GeneTree should match this regular expression:
^genetree:ENSGT\d+$ - Example CURIE
- genetree:ENSGT00550000074763
- Publications
Metaregistry GeneTree
The metaregistry provides mappings between the Bioregistry and other registries. There are 5 mappings to external registries for this resource with 2 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
GENETREE
|
|
Identifiers.org
|
miriam |
genetree
|
|
N2T
|
n2t |
genetree
|
|
Prefix Commons
|
prefixcommons |
genetree
|
|
UniProt
|
uniprot |
DB-0162
|
Providers
Providers are various services that resolve CURIEs to URLs. The example CURIE
genetree:ENSGT00550000074763
is used to demonstrate the provides available for
this resource. Generation of OLS and BioPortal URLs requires additional programmatic
logic beyond string formatting.
Extra Providers
Additional providers curated in the Bioregistry are listed here.
| Code | Name | URL |
|---|---|---|
bio2rdf |
Bio2RDF | http://bio2rdf.org/genetree:ENSGT00550000074763 |