The Functional Single Nucleotide Polymorphism (F-SNP) database integrates information obtained from databases about the functional effects of SNPs. These effects are predicted and indicated at the splicing, transcriptional, translational and post-translational level. In particular, users can retrieve SNPs that disrupt genomic regions known to be functional, including splice sites and transcriptional regulatory regions. Users can also identify non-synonymous SNPs that may have deleterious effects on protein structure or function, interfere with protein translation or impede post-translational modification.

Prefix

fsnp

Keywords

dna protein

Links

Homepage

Contact

Missing Contact

Pattern for Local Unique Identifiers

Local identifiers in F-SNP should match this regular expression:
^rs\d+$

Example Local Unique Identifier

rs17852708   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from F-SNP should match this regular expression:
^fsnp:rs\d+$

Example CURIE

fsnp:rs17852708

The metaregistry provides mappings between the Bioregistry and other registries. There are 4 mappings to external registries for this resource with 1 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier rs17852708 is used to demonstrate the providers available for F-SNP. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.