A miscellaneous ontology of terms used for curation in FlyBase, including the DPO.

Prefix
fbcv
Preferred Prefix
FBcv
Alternative Prefixes
FBcv
Keywords
descriptor expression data fly life science obo ontology phenotype
Version
2023-12-08
License
CC-BY-4.0
Links
Homepage Repository OBO OWL OBO JSON
Contact
Clare Pilgrim   0000-0002-1373-1705   Clare72
Pattern for Local Unique Identifiers

Local identifiers in FlyBase Controlled Vocabulary should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0000586   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from FlyBase Controlled Vocabulary should match this regular expression:
^FBcv:\d{7}$

Example CURIE
FBcv:0000586
Publications
2013 The Drosophila phenotype ontology
Ontology

A summary of the relations in the Bioregistry schema can be found here.

Part Of (bfo:0000050 )
FlyBase
Has Parts (bfo:0000051 )
DPO
Appears In (1) (bioregistry.schema:0000018 )
ONTOAVIDA
Metaregistry FlyBase Controlled Vocabulary

The metaregistry provides mappings between the Bioregistry and other registries. There are 8 mappings to external registries for this resource with 3 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl FBCV
BioContext biocontext FBcv
BioPortal BioPortal Prefixes logo bioportal FB-CV
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.6tgyxf
OBO Foundry OBO Foundry logo obofoundry fbcv
OLS Ontology Lookup Service logo ols fbcv
OntoBee OntoBee logo ontobee FBcv
Prefix Commons Prefix Commons logo prefixcommons fbcv
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/FBcv_$1

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE FBcv:0000586 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
FlyBase Controlled Vocabulary fbcv http://purl.obolibrary.org/obo/FBcv_0000586
FlyBase Controlled Vocabulary (RDF) rdf http://purl.obolibrary.org/obo/FBcv_0000586
Bioregistry bioregistry https://bioregistry.io/fbcv:0000586
OBO Foundry obofoundry http://purl.obolibrary.org/obo/FBcv_0000586
Ontology Lookup Service ols https://www.ebi.ac.uk/ols4/ontologies/fbcv/terms?iri=http://purl.obolibrary.org/obo/FBcv_0000586
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/FB-CV/?p=classes&conceptid=http://purl.obolibrary.org/obo/FBcv_0000586
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/fbcv:0000586