Ensembl Genomes consists of five sub-portals (for bacteria, protists, fungi, plants and invertebrate metazoa) designed to complement the availability of vertebrate genomes in Ensembl. This collection is concerned with metazoa genomes.

Prefix

ensembl.metazoa

Keywords

comparative genomics genome genomics

Links

Homepage

Contact

Paul Flicek   0000-0002-3897-7955

Pattern for Local Unique Identifiers

Local identifiers in Ensembl Metazoa, the Ensembl database for accessing genome-scale data from non-vertebrate metazoa. should match this regular expression:
^\w+(\.)?\d+$

Example Local Unique Identifier

FBtr0084214   Resolve

Pattern for CURIES

Compact URIs (CURIEs) constructed from Ensembl Metazoa, the Ensembl database for accessing genome-scale data from non-vertebrate metazoa. should match this regular expression:
^ensembl\.metazoa:\w+(\.)?\d+$

Example CURIE

ensembl.metazoa:FBtr0084214

Publications

• 2020 Ensembl Genomes 2020-enabling non-vertebrate genomic research
• 2015 Ensembl Genomes 2016: more genomes, more complexity

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for this resource with 6 unique external prefixes.

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

The local unique identifier FBtr0084214 is used to demonstrate the providers available for Ensembl Metazoa, the Ensembl database for accessing genome-scale data from non-vertebrate metazoa.. A guide for curating additional providers can be found here.

Additional providers curated in the Bioregistry are listed here. These are typically inherited from Identifiers.org or Prefix Commons, and need extra curation.