EcoliWiki is a wiki-based resource to store information related to non-pathogenic E. coli, its phages, plasmids, and mobile genetic elements. This collection references genes.
- Prefix
ecoliwiki- Keywords
- bioinformatics genomics life science ontology and terminology
- Links
- Homepage
- Contact
- Peter D. Karp 0000-0002-5876-6418 pkarp111
- Pattern for Local Unique Identifiers
-
Local identifiers in EcoliWiki from EcoliHub should match this regular expression:
^[A-Za-z0-9-]+$ - Example Local Unique Identifier
- aaeA Resolve
- Pattern for CURIES
-
Compact URIs (CURIEs) constructed from EcoliWiki from EcoliHub should match this regular expression:
^ecoliwiki:[A-Za-z0-9-]+$ - Example CURIE
- ecoliwiki:aaeA
- Publications
- 2009 What we can learn about Escherichia coli through application of Gene Ontology
Metaregistry EcoliWiki from EcoliHub
The metaregistry provides mappings between the Bioregistry and other registries. There are 6 mappings to external registries for this resource with 3 unique external prefixes.
| Registry Name | Registry Metaprefix | External Prefix | Curate |
|---|---|---|---|
| BioContext | biocontext |
ECOLIWIKI
|
|
FAIRSharing
|
fairsharing |
FAIRsharing.tx95wa
|
|
GO
|
go |
EcoliWiki
|
|
Integbio
|
integbio |
nbdc02041
|
|
Identifiers.org
|
miriam |
ecoliwiki
|
|
N2T
|
n2t |
ecoliwiki
|
Providers
A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).
The local unique identifier aaeA is used to demonstrate the providers
available for EcoliWiki from EcoliHub. A guide for curating additional providers can be found
here.
| Name | Metaprefix | URI |
|---|---|---|
| EcoliWiki from EcoliHub | ecoliwiki |
http://ecoliwiki.net/colipedia/index.php/aaeA:Gene |
| Bioregistry | bioregistry |
https://bioregistry.io/ecoliwiki:aaeA |
| Identifiers.org | miriam |
https://identifiers.org/ecoliwiki:aaeA |
| Name-to-Thing | n2t |
https://n2t.net/ecoliwiki:aaeA |