A structured controlled vocabulary of anatomies of the slime-mold Dictyostelium discoideum.

Prefix
ddanat
Preferred Prefix
DDANAT
Keywords
anatomy cell life science obo ontology slime-mould
License
CC0-1.0
Links
Homepage Repository OBO OWL @dictybase
Contact
Petra Fey   0000-0002-4532-2703   pfey03
Pattern for Local Unique Identifiers

Local identifiers in Dictyostelium discoideum anatomy should match this regular expression:
^\d{7}$

Example Local Unique Identifier
0000006   Resolve
Pattern for CURIES

Compact URIs (CURIEs) constructed from Dictyostelium discoideum anatomy should match this regular expression:
^DDANAT:\d{7}$

Example CURIE
DDANAT:0000006
Publications
2008 An anatomy ontology to represent biological knowledge in Dictyostelium discoideum
Metaregistry Dictyostelium discoideum anatomy

The metaregistry provides mappings between the Bioregistry and other registries. There are 9 mappings to external registries for this resource with 2 unique external prefixes.

Registry Name Registry Metaprefix External Prefix Curate
AberOWL AberOWL logo aberowl DDANAT
BioContext biocontext DDANAT
BioPortal BioPortal Prefixes logo bioportal DDANAT
FAIRSharing FAIRSharing logo fairsharing FAIRsharing.z656ab
GO Gene Ontology Registry logo go DDANAT
OBO Foundry OBO Foundry logo obofoundry ddanat
OLS Ontology Lookup Service logo ols ddanat
OntoBee OntoBee logo ontobee DDANAT
Prefix Commons Prefix Commons logo prefixcommons ddanat
RDF Information

When using this resource in RDF, the following URI format should be used:

http://purl.obolibrary.org/obo/DDANAT_$1

Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE DDANAT:0000006 is used to demonstrate the provides available for this resource. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URI
Dictyostelium discoideum anatomy ddanat http://purl.obolibrary.org/obo/DDANAT_0000006
Dictyostelium discoideum anatomy (RDF) rdf http://purl.obolibrary.org/obo/DDANAT_0000006
Bioregistry bioregistry https://bioregistry.io/ddanat:0000006
OBO Foundry obofoundry http://purl.obolibrary.org/obo/DDANAT_0000006
Ontology Lookup Service ols https://www.ebi.ac.uk/ols4/ontologies/ddanat/terms?iri=http://purl.obolibrary.org/obo/DDANAT_0000006
BioPortal Prefixes bioportal https://bioportal.bioontology.org/ontologies/DDANAT/?p=classes&conceptid=http://purl.obolibrary.org/obo/DDANAT_0000006
Extra Providers

Additional providers curated in the Bioregistry are listed here.

Code Name URL
bio2rdf Bio2RDF http://bio2rdf.org/ddanat:0000006