Registry Chromosome Ontology

Suggest

The Chromosome Ontology is an automatically derived ontology of chromosomes and chromosome parts.

Prefix

chr

Keywords

ontology

License

BSD-3

Links

Homepage Repository OBO OWL OBO JSON Request Discussion

Contact

Chris Mungall 0000-0002-6601-2165 cmungall

Pattern for Local Unique Identifiers

Missing LUI pattern

Example Local Unique Identifier

10090-chr10qC

Example CURIE

chr:10090-chr10qC

Contributors

submitter Harry Caufield 0000-0001-5705-7831 caufieldjh

Reviewer

Charles Tapley Hoyt 0000-0003-4423-4370 cthoyt

Metaregistry Chromosome Ontology

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for this resource with 1 unique external prefixes.

Registry Name	Registry Metaprefix	External Prefix
AberOWL	`aberowl`	`CHR`
BioContext	`biocontext`	`CHR`
BioPortal	`bioportal`	`CHR`

Providers

Suggest

A provider turns a local unique identifiers from a resource into a URI. Many providers are also resolvable as URLs (i.e., they can be used in a web browser).

This resource does not have any providers. Please consider contributing one after reading the curation guide.

Get the license:

>>> import bioregistry as br
>>> br.get_license("chr")
'BSD-3'

Get the homepage:

>>> import bioregistry as br
>>> br.get_homepage("chr")
'https://github.com/monarch-initiative/monochrom'

Get the repository:

>>> import bioregistry as br
>>> br.get_repository("chr")
'https://github.com/monarch-initiative/monochrom'

Get the OBO download link:

>>> import bioregistry as br
>>> br.get_obo_download("chr")
'https://raw.githubusercontent.com/monarch-initiative/monochrom/refs/heads/master/chr.obo'

Get the OWL download link:

>>> import bioregistry as br
>>> br.get_owl_download("chr")
'https://raw.githubusercontent.com/monarch-initiative/monochrom/refs/heads/master/chr.owl'

Get the JSON download link:

>>> import bioregistry as br
>>> br.get_json_download("chr")
'https://raw.githubusercontent.com/monarch-initiative/monochrom/refs/heads/master/chr.json'

Get the contact's name:

>>> import bioregistry as br
>>> br.get_contact_name("chr")
'Chris Mungall'

Get the contact's email:

>>> import bioregistry as br
>>> br.get_contact_email("chr")
'cjmungall@lbl.gov'

Get the contact's GitHub handle:

>>> import bioregistry as br
>>> br.get_contact_github("chr")
'cmungall'

Get the contact's ORCiD identifier:

>>> import bioregistry as br
>>> br.get_contact_orcid("chr")
'0000-0002-6601-2165'