BiGG is a knowledgebase of Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions. It more published genome-scale metabolic networks into a single database with a set of stardized identifiers called BiGG IDs. Genes in the BiGG models are mapped to NCBI genome annotations, and metabolites are linked to many external databases (KEGG, PubChem, and many more). This collection references individual models.

Prefix
bigg.model
Links
Homepage
Contact
Missing Contact
Pattern
^[a-z_A-Z0-9]+$
Namespace in Pattern
False
Example Identifier
iECABU_c1320   Resolve
Metaregistry

The metaregistry provides mappings between the Bioregistry and other registries. There are 3 mappings to external registries for bigg.model.

Registry Name Metaprefix Metaidentifier
Identifiers.org miriam bigg.model
Name-to-Thing n2t bigg.model
Prefix Commons prefixcommons BIGG.MODEL
Providers

Providers are various services that resolve CURIEs to URLs. The example CURIE bigg.model:iECABU_c1320 is used to demonstrate the provides available for bigg.model. Generation of OLS and BioPortal URLs requires additional programmatic logic beyond string formatting.

Name Metaprefix URL
BiGG Model bigg.model http://bigg.ucsd.edu/models/iECABU_c1320
Bioregistry bioregistry https://bioregistry.io/bigg.model:iECABU_c1320
Identifiers.org miriam https://identifiers.org/bigg.model:iECABU_c1320
Name-to-Thing n2t https://n2t.net/bigg.model:iECABU_c1320