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Gpr84 G protein-coupled receptor 84 [ Mus musculus (house mouse) ]

Gene ID: 80910, updated on 25-Apr-2024

Summary

Official Symbol
Gpr84provided by MGI
Official Full Name
G protein-coupled receptor 84provided by MGI
Primary source
MGI:MGI:1934129
See related
Ensembl:ENSMUSG00000063234 AllianceGenome:MGI:1934129
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
EX33
Summary
Predicted to enable urotensin II receptor activity. Predicted to be involved in neuropeptide signaling pathway. Predicted to act upstream of or within signal transduction. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be part of receptor complex. Predicted to be integral component of plasma membrane. Is expressed in several structures, including adrenal gland; gut; metanephros; reproductive system; and skin. Orthologous to human GPR84 (G protein-coupled receptor 84). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

Location:
15 F3; 15 58.88 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (103216660..103219050, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (103308233..103310670, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene coatomer protein complex, subunit zeta 1 Neighboring gene microRNA 148b Neighboring gene predicted gene, 41406 Neighboring gene STARR-positive B cell enhancer ABC_E3160 Neighboring gene STARR-positive B cell enhancer ABC_E1487 Neighboring gene zinc finger protein 385A Neighboring gene STARR-positive B cell enhancer ABC_E5521 Neighboring gene STARR-positive B cell enhancer mm9_chr15:103177678-103177979 Neighboring gene integrin alpha 5 (fibronectin receptor alpha) Neighboring gene microRNA 6963

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 
enables urotensin II receptor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in neuropeptide signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of receptor complex ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
G-protein coupled receptor 84
Names
orphan G protein-coupled receptor 84

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001411984.1NP_001398913.1  G-protein coupled receptor 84

    Status: VALIDATED

    Source sequence(s)
    AC164069
    UniProtKB/TrEMBL
    A0A0R4J100
  2. NM_030720.3NP_109645.1  G-protein coupled receptor 84

    See identical proteins and their annotated locations for NP_109645.1

    Status: VALIDATED

    Source sequence(s)
    AC164069
    Consensus CDS
    CCDS27902.1
    UniProtKB/Swiss-Prot
    Q8CIM5, Q99MX9
    UniProtKB/TrEMBL
    A0A0R4J100
    Related
    ENSMUSP00000078753.5, ENSMUST00000079824.6
    Conserved Domains (1) summary
    cd15210
    Location:21381
    7tmA_GPR84-like; G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    103216660..103219050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036159641.1XP_036015534.1  G-protein coupled receptor 84 isoform X2

    UniProtKB/Swiss-Prot
    Q8CIM5, Q99MX9
    UniProtKB/TrEMBL
    A0A0R4J100
    Conserved Domains (1) summary
    cd15210
    Location:21381
    7tmA_GPR84-like; G protein-coupled receptor 84 and similar proteins, member of the class A family of seven-transmembrane G protein-coupled receptors