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MMP20 matrix metallopeptidase 20 [ Pan troglodytes (chimpanzee) ]

Gene ID: 740407, updated on 3-Apr-2024

Summary

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Official Symbol
MMP20provided by VGNC
Official Full Name
matrix metallopeptidase 20provided by VGNC
Primary source
VGNC:VGNC:1096
Locus tag
CK820_G0031061
See related
Ensembl:ENSPTRG00000004216
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 9 NC_072407.2 (104625306..104675104, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 11 NC_072409.1 (103855927..103904393, complement)

Chromosome 9 - NC_072407.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107967355 Neighboring gene uncharacterized LOC134807373 Neighboring gene matrix metallopeptidase 7 Neighboring gene uncharacterized LOC104001307 Neighboring gene matrix metallopeptidase 27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amelogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in collagen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
matrix metalloproteinase-20
Names
matrix metallopeptidase 20 (enamelysin)
matrix metalloproteinase 20

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    104625306..104675104 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001153208.6 → XP_001153208.3  matrix metalloproteinase-20

    UniProtKB/TrEMBL
    A0A2J8LBL9, A0A6D2XRD7, H2Q4M8
Nucleotide Protein
Heading Accession and Version

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