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VDAC2P5 VDAC2 pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 729317, updated on 10-Oct-2023

Summary

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Official Symbol
VDAC2P5provided by HGNC
Official Full Name
VDAC2 pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:54753
See related
AllianceGenome:HGNC:54753
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
2p14
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (65205076..65206278)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (65214746..65215948)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (65432210..65433412)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene centrosomal protein 68 Neighboring gene RAB1A, member RAS oncogene family Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:65354445-65354984 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:65356508-65357022 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:65357023-65357536 Neighboring gene small nucleolar RNA SNORA74 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:65404421-65404957 Neighboring gene MPRA-validated peak3732 silencer Neighboring gene uncharacterized LOC124907779 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:65453956-65454845 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:65454846-65455734 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15927 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_58697 Neighboring gene actin related protein 2 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:65502227-65502894 Neighboring gene uncharacterized LOC124907781

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mapping of the human Voltage-Dependent Anion Channel isoforms 1 and 2 reconsidered. Messina A, et al. Biochem Biophys Res Commun, 1999 Feb 24. PMID 10049775
  2. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

See Variation Viewer (GRCh38)

General gene information

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Markers

Other Names

  • voltage dependent anion channel 2 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_016635.2 

    Range
    101..1303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    65205076..65206278
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    65214746..65215948
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Chemical Information
Molecular Biology Databases