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TFDP1 transcription factor Dp-1 [ Canis lupus familiaris (dog) ]

Gene ID: 607720, updated on 5-Mar-2024

Summary

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Gene symbol
TFDP1
Gene description
transcription factor Dp-1
See related
Ensembl:ENSCAFG00845027014
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 22
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 22 NC_051826.1 (61554725..61581881)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 22 NC_006604.4 (60581230..60608364)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 22 NC_049243.1 (61026641..61053745)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 22 NC_049282.1 (60993491..61020624)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 22 NC_049763.1 (60995475..61022666)

Chromosome 22 - NC_051826.1Genomic Context describing neighboring genes Neighboring gene transmembrane and coiled-coil domains 3 Neighboring gene small ubiquitin-related modifier 2-like Neighboring gene uncharacterized LOC119865245 Neighboring gene ATPase H+/K+ transporting subunit beta Neighboring gene G protein-coupled receptor kinase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor Dp-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051826.1 Reference ROS_Cfam_1.0

    Range
    61554725..61581881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038431536.1 → XP_038287464.1  transcription factor Dp-1

    UniProtKB/TrEMBL
    A0A8C0PK26, A0A8C0S944, A0A8I3Q0D4
    Related
    ENSCAFP00845037390.1, ENSCAFT00845047648.1
    Conserved Domains (3) summary
    cd14458
    Location:203 → 249
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:118 → 198
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:205 → 343
    DP; Transcription factor DP

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049282.1 Alternate UMICH_Zoey_3.1

    Range
    60993491..61020624
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038506916.1 → XP_038362844.1  transcription factor Dp-1

    Conserved Domains (3) summary
    cd14458
    Location:203 → 249
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:118 → 198
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:205 → 343
    DP; Transcription factor DP

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049763.1 Alternate UNSW_CanFamBas_1.0

    Range
    60995475..61022666
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038634303.1 → XP_038490231.1  transcription factor Dp-1

    Conserved Domains (3) summary
    cd14458
    Location:203 → 249
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:118 → 198
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:205 → 343
    DP; Transcription factor DP

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049243.1 Alternate UU_Cfam_GSD_1.0

    Range
    61026641..61053745
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038570130.1 → XP_038426058.1  transcription factor Dp-1

    UniProtKB/TrEMBL
    A0A8C0PK26, A0A8C0S944, A0A8I3Q0D4
    Conserved Domains (3) summary
    cd14458
    Location:203 → 249
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:118 → 198
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:205 → 343
    DP; Transcription factor DP

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006604.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    60581230..60608364
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022408179.2 → XP_022263887.1  transcription factor Dp-1

    UniProtKB/TrEMBL
    A0A8C0PK26, A0A8C0S944, A0A8I3Q0D4
    Conserved Domains (3) summary
    cd14458
    Location:203 → 249
    DP_DD; coiled coil [structural motif]
    pfam02319
    Location:118 → 198
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain
    pfam08781
    Location:205 → 343
    DP; Transcription factor DP
Nucleotide Protein
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