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rpl32 ribosomal protein L32 [ Danio rerio (zebrafish) ]

Gene ID: 556556, updated on 27-Mar-2024

Summary

Official Symbol
rpl32provided by ZNC
Official Full Name
ribosomal protein L32provided by ZNC
Primary source
ZFIN:ZDB-GENE-060331-105
See related
Ensembl:ENSDARG00000054818 AllianceGenome:ZFIN:ZDB-GENE-060331-105
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:136952
Summary
Predicted to be a structural constituent of ribosome. Predicted to act upstream of or within translation. Predicted to be located in ribosome. Predicted to be part of cytosolic large ribosomal subunit. Orthologous to human RPL32 (ribosomal protein L32). [provided by Alliance of Genome Resources, Apr 2022]
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

Location:
chromosome: 22
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 22 NC_007133.7 (31039093..31044069)
105 previous assembly GRCz10 (GCF_000002035.5) 22 NC_007133.6 (31089898..31094874)

Chromosome 22 - NC_007133.7Genomic Context describing neighboring genes Neighboring gene ssu-2 homolog, tandem duplicate 4 Neighboring gene sterile alpha motif domain containing 9 like Neighboring gene cullin-associated and neddylation-dissociated 2 (putative) Neighboring gene SEC13 homolog, nuclear pore and COPII coat complex component

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC136952, MGC174241

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of cytosolic large ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001040043.3NP_001035132.1  60S ribosomal protein L32

    See identical proteins and their annotated locations for NP_001035132.1

    Status: VALIDATED

    Source sequence(s)
    BX537350
    UniProtKB/TrEMBL
    A0A2R8Q7R7, A0A2R8RWN4, Q24JV1
    Related
    ENSDARP00000060004.5, ENSDART00000060005.6
    Conserved Domains (1) summary
    pfam01655
    Location:17124
    Ribosomal_L32e; Ribosomal protein L32

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007133.7 Reference GRCz11 Primary Assembly

    Range
    31039093..31044069
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018395121.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    339009..343207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395357.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    21968..26944
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)