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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051833.1 Reference ROS_Cfam_1.0
- Range
-
34093268..34403773 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038441559.1 → XP_038297487.1 matrix metalloproteinase-16 isoform X2
- UniProtKB/TrEMBL
-
A0A8C0T0T4
- Conserved Domains (4) summary
-
- PHA03247
Location:292 → 338
- PHA03247; large tegument protein UL36; Provisional
- cd00094
Location:340 → 499
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:126 → 291
- Peptidase_M10; Matrixin
- pfam01471
Location:46 → 96
- PG_binding_1; Putative peptidoglycan binding domain
-
XM_038441558.1 → XP_038297486.1 matrix metalloproteinase-16 isoform X1
- UniProtKB/TrEMBL
- A0A8C0KH15, A0A8C0PE40, A0A8C0T0T4, A0A8I3S0N4
- Related
- ENSCAFP00845025899.1, ENSCAFT00845033087.1
- Conserved Domains (5) summary
-
- PHA03247
Location:292 → 338
- PHA03247; large tegument protein UL36; Provisional
- cd00094
Location:340 → 532
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:126 → 291
- Peptidase_M10; Matrixin
- pfam01471
Location:46 → 96
- PG_binding_1; Putative peptidoglycan binding domain
- pfam11857
Location:537 → 607
- DUF3377; Domain of unknown function (DUF3377)
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049289.1 Alternate UMICH_Zoey_3.1
- Range
-
34106198..34398221 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038516128.1 → XP_038372056.1 LOW QUALITY PROTEIN: matrix metalloproteinase-16 isoform X1
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049770.1 Alternate UNSW_CanFamBas_1.0
- Range
-
34114566..34418869 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038643940.1 → XP_038499868.1 matrix metalloproteinase-16 isoform X2
- Conserved Domains (4) summary
-
- PHA03247
Location:292 → 338
- PHA03247; large tegument protein UL36; Provisional
- cd00094
Location:340 → 499
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:126 → 291
- Peptidase_M10; Matrixin
- pfam01471
Location:46 → 96
- PG_binding_1; Putative peptidoglycan binding domain
-
XM_038643939.1 → XP_038499867.1 matrix metalloproteinase-16 isoform X1
- Conserved Domains (5) summary
-
- PHA03247
Location:292 → 338
- PHA03247; large tegument protein UL36; Provisional
- cd00094
Location:340 → 532
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:126 → 291
- Peptidase_M10; Matrixin
- pfam01471
Location:46 → 96
- PG_binding_1; Putative peptidoglycan binding domain
- pfam11857
Location:537 → 607
- DUF3377; Domain of unknown function (DUF3377)
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049250.1 Alternate UU_Cfam_GSD_1.0
- Range
-
34536488..34840936 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038579701.1 → XP_038435629.1 matrix metalloproteinase-16 isoform X2
- UniProtKB/TrEMBL
-
A0A8C0T0T4
- Conserved Domains (4) summary
-
- PHA03247
Location:292 → 338
- PHA03247; large tegument protein UL36; Provisional
- cd00094
Location:340 → 499
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:126 → 291
- Peptidase_M10; Matrixin
- pfam01471
Location:46 → 96
- PG_binding_1; Putative peptidoglycan binding domain
-
XM_038579700.1 → XP_038435628.1 matrix metalloproteinase-16 isoform X1
- UniProtKB/TrEMBL
- A0A8C0KH15, A0A8C0PE40, A0A8C0T0T4, A0A8I3S0N4
- Conserved Domains (5) summary
-
- PHA03247
Location:292 → 338
- PHA03247; large tegument protein UL36; Provisional
- cd00094
Location:340 → 532
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:126 → 291
- Peptidase_M10; Matrixin
- pfam01471
Location:46 → 96
- PG_binding_1; Putative peptidoglycan binding domain
- pfam11857
Location:537 → 607
- DUF3377; Domain of unknown function (DUF3377)
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006611.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
34056176..34360687 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_022412468.2 → XP_022268176.1 matrix metalloproteinase-16 isoform X2
- UniProtKB/TrEMBL
-
A0A8C0T0T4
- Conserved Domains (4) summary
-
- PHA03247
Location:292 → 338
- PHA03247; large tegument protein UL36; Provisional
- cd00094
Location:340 → 499
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:126 → 291
- Peptidase_M10; Matrixin
- pfam01471
Location:46 → 96
- PG_binding_1; Putative peptidoglycan binding domain
-
XM_544165.8 → XP_544165.3 matrix metalloproteinase-16 isoform X1
- UniProtKB/TrEMBL
- A0A8C0KH15, A0A8C0PE40, A0A8C0T0T4, A0A8I3S0N4
- Conserved Domains (5) summary
-
- PHA03247
Location:292 → 338
- PHA03247; large tegument protein UL36; Provisional
- cd00094
Location:340 → 532
- HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
- pfam00413
Location:126 → 291
- Peptidase_M10; Matrixin
- pfam01471
Location:46 → 96
- PG_binding_1; Putative peptidoglycan binding domain
- pfam11857
Location:537 → 607
- DUF3377; Domain of unknown function (DUF3377)