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KLF7 KLF transcription factor 7 [ Canis lupus familiaris (dog) ]

Gene ID: 478885, updated on 5-Mar-2024

Summary

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Official Symbol
KLF7provided by VGNC
Official Full Name
KLF transcription factor 7provided by VGNC
Primary source
VGNC:VGNC:54965
See related
Ensembl:ENSCAFG00845021900
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 37
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 37 NC_051841.1 (15452165..15543812, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 37 NC_006619.4 (16399666..16491163, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 37 NC_049258.1 (15376216..15471564, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 37 NC_049297.1 (15397928..15489697, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 37 NC_049778.1 (15371249..15462865, complement)

Chromosome 37 - NC_051841.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111094437 Neighboring gene carboxypeptidase O Neighboring gene uncharacterized LOC119867945 Neighboring gene uncharacterized LOC111094352 Neighboring gene uncharacterized LOC102156884 Neighboring gene uncharacterized LOC111094350 Neighboring gene uncharacterized LOC119867947

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A Missense Mutation in the KLF7 Gene Is a Potential Candidate Variant for Congenital Deafness in Australian Stumpy Tail Cattle Dogs. Xu F, et al. Genes (Basel), 2021 Mar 24. PMID 33805165, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. A Missense Mutation in the KLF7 Gene Is a Potential Candidate Variant for Congenital Deafness in Australian Stumpy Tail Cattle Dogs.
    Title: A Missense Mutation in the KLF7 Gene Is a Potential Candidate Variant for Congenital Deafness in Australian Stumpy Tail Cattle Dogs.
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Krueppel-like factor 7
Names
Kruppel like factor 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051841.1 Reference ROS_Cfam_1.0

    Range
    15452165..15543812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038447767.1 → XP_038303695.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LQ70, A0A8C0R912, A0A8C0TVN4, A0A8C0TVQ3, A0A8I3PEF1
    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  2. XM_038447766.1 → XP_038303694.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LQ70, A0A8C0R912, A0A8C0TVN4, A0A8C0TVQ3, A0A8I3PEF1
    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  3. XM_038447768.1 → XP_038303696.1  Krueppel-like factor 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MTG6, A0A8C0R912, A0A8C0TVQ3
    Conserved Domains (3) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  4. XM_038447765.1 → XP_038303693.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LQ70, A0A8C0R912, A0A8C0TVN4, A0A8C0TVQ3, A0A8I3PEF1
    Related
    ENSCAFP00845030242.1, ENSCAFT00845038627.1
    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  5. XM_038447769.1 → XP_038303697.1  Krueppel-like factor 7 isoform X3

    Conserved Domains (1) summary
    cd21585
    Location:2 → 152
    KLF7_N; N-terminal domain of Kruppel-like factor 7

RNA

  1. XR_005308379.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049297.1 Alternate UMICH_Zoey_3.1

    Range
    15397928..15489697 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038521833.1 → XP_038377761.1  Krueppel-like factor 7 isoform X2

    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  2. XM_038521832.1 → XP_038377760.1  Krueppel-like factor 7 isoform X2

    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  3. XM_038521834.1 → XP_038377762.1  Krueppel-like factor 7 isoform X1

    Conserved Domains (3) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  4. XM_038521831.1 → XP_038377759.1  Krueppel-like factor 7 isoform X2

    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  5. XM_038521835.1 → XP_038377763.1  Krueppel-like factor 7 isoform X3

    Conserved Domains (1) summary
    cd21585
    Location:2 → 152
    KLF7_N; N-terminal domain of Kruppel-like factor 7

RNA

  1. XR_005351319.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049778.1 Alternate UNSW_CanFamBas_1.0

    Range
    15371249..15462865 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038649940.1 → XP_038505868.1  Krueppel-like factor 7 isoform X2

  2. XM_038649939.1 → XP_038505867.1  Krueppel-like factor 7 isoform X2

  3. XM_038649938.1 → XP_038505866.1  Krueppel-like factor 7 isoform X2

  4. XM_038649941.1 → XP_038505869.1  Krueppel-like factor 7 isoform X3

    Conserved Domains (1) summary
    cd21585
    Location:2 → 152
    KLF7_N; N-terminal domain of Kruppel-like factor 7

RNA

  1. XR_005419033.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049258.1 Alternate UU_Cfam_GSD_1.0

    Range
    15376216..15471564 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038585552.1 → XP_038441480.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LQ70, A0A8C0R912, A0A8C0TVN4, A0A8C0TVQ3, A0A8I3PEF1
    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  2. XM_038585551.1 → XP_038441479.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LQ70, A0A8C0R912, A0A8C0TVN4, A0A8C0TVQ3, A0A8I3PEF1
    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  3. XM_038585553.1 → XP_038441481.1  Krueppel-like factor 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MTG6, A0A8C0R912, A0A8C0TVQ3
    Conserved Domains (3) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  4. XM_038585549.1 → XP_038441477.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LQ70, A0A8C0R912, A0A8C0TVN4, A0A8C0TVQ3, A0A8I3PEF1
    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  5. XM_038585554.1 → XP_038441482.1  Krueppel-like factor 7 isoform X3

    Conserved Domains (1) summary
    cd21585
    Location:2 → 152
    KLF7_N; N-terminal domain of Kruppel-like factor 7

RNA

  1. XR_005385288.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006619.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    16399666..16491163 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038463628.1 → XP_038319556.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LQ70, A0A8C0R912, A0A8C0TVN4, A0A8C0TVQ3, A0A8I3PEF1
    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  2. XM_038463627.1 → XP_038319555.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LQ70, A0A8C0R912, A0A8C0TVN4, A0A8C0TVQ3, A0A8I3PEF1
    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  3. XM_038463629.1 → XP_038319557.1  Krueppel-like factor 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MTG6, A0A8C0R912, A0A8C0TVQ3
    Conserved Domains (3) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  4. XM_022415277.2 → XP_022270985.1  Krueppel-like factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A8C0LQ70, A0A8C0R912, A0A8C0TVN4, A0A8C0TVQ3, A0A8I3PEF1
    Conserved Domains (4) summary
    COG5048
    Location:212 → 284
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:224 → 243
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:279 → 301
    zf-C2H2; Zinc finger, C2H2 type
    cd21585
    Location:2 → 220
    KLF7_N; N-terminal domain of Kruppel-like factor 7

  5. XM_854989.6 → XP_860082.1  Krueppel-like factor 7 isoform X3

    Conserved Domains (1) summary
    cd21585
    Location:2 → 152
    KLF7_N; N-terminal domain of Kruppel-like factor 7

RNA

  1. XR_005318324.1 RNA Sequence

Nucleotide Protein
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