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PPARD peroxisome proliferator activated receptor delta [ Pan troglodytes (chimpanzee) ]

Gene ID: 463188, updated on 3-Apr-2024

Summary

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Official Symbol
PPARDprovided by VGNC
Official Full Name
peroxisome proliferator activated receptor deltaprovided by VGNC
Primary source
VGNC:VGNC:7904
Locus tag
CK820_G0007055
See related
Ensembl:ENSPTRG00000018082
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (41216014..41299454)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (41216058..41299460)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene zinc finger protein 76 Neighboring gene DEF6 guanine nucleotide exchange factor Neighboring gene probable E3 ubiquitin-protein ligase makorin-1 Neighboring gene FA complementation group E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of cholesterol storage IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisome proliferator-activated receptor delta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    41216014..41299454
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_518905.7 → XP_518905.2  peroxisome proliferator-activated receptor delta isoform X1

    See identical proteins and their annotated locations for XP_518905.2

    UniProtKB/TrEMBL
    A0A2I3T3C8, A0A2J8NYZ0, A0A6D2WBY5, H2R2N3
    Related
    ENSPTRP00000044222.3
    Conserved Domains (2) summary
    cd06932
    Location:173 → 440
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cd06965
    Location:73 → 156
    NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

  2. XM_063812918.1 → XP_063668988.1  peroxisome proliferator-activated receptor delta isoform X3

  3. XM_063812923.1 → XP_063668993.1  peroxisome proliferator-activated receptor delta isoform X4

  4. XM_063812907.1 → XP_063668977.1  peroxisome proliferator-activated receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A2J8NYZ0, A0A6D2WBY5, H2R2N3

  5. XM_063812913.1 → XP_063668983.1  peroxisome proliferator-activated receptor delta isoform X2

  6. XM_063812903.1 → XP_063668973.1  peroxisome proliferator-activated receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A2J8NYZ0, A0A6D2WBY5, H2R2N3

  7. XM_063812919.1 → XP_063668989.1  peroxisome proliferator-activated receptor delta isoform X3

  8. XM_063812904.1 → XP_063668974.1  peroxisome proliferator-activated receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A2J8NYZ0, A0A6D2WBY5, H2R2N3

  9. XM_063812925.1 → XP_063668995.1  peroxisome proliferator-activated receptor delta isoform X4

  10. XM_009451110.5 → XP_009449385.1  peroxisome proliferator-activated receptor delta isoform X1

    See identical proteins and their annotated locations for XP_009449385.1

    UniProtKB/TrEMBL
    A0A2I3T3C8, A0A2J8NYZ0, A0A6D2WBY5, H2R2N3
    Conserved Domains (2) summary
    cd06932
    Location:173 → 440
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cd06965
    Location:73 → 156
    NR_DBD_Ppar; DNA-binding domain of peroxisome proliferator-activated receptors (PPAR) is composed of two C4-type zinc fingers

  11. XM_063812924.1 → XP_063668994.1  peroxisome proliferator-activated receptor delta isoform X4

  12. XM_016955309.4 → XP_016810798.1  peroxisome proliferator-activated receptor delta isoform X2

    Conserved Domains (2) summary
    cd06932
    Location:135 → 402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57 → 118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  13. XM_063812905.1 → XP_063668975.1  peroxisome proliferator-activated receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A2J8NYZ0, A0A6D2WBY5, H2R2N3

  14. XM_063812926.1 → XP_063668996.1  peroxisome proliferator-activated receptor delta isoform X4

  15. XM_063812914.1 → XP_063668984.1  peroxisome proliferator-activated receptor delta isoform X2

  16. XM_003311240.6 → XP_003311288.1  peroxisome proliferator-activated receptor delta isoform X5

    See identical proteins and their annotated locations for XP_003311288.1

    UniProtKB/TrEMBL
    A0A2I3T161, K7CUN0
    Related
    ENSPTRP00000083985.1
    Conserved Domains (1) summary
    cd06932
    Location:75 → 342
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors

  17. XM_063812928.1 → XP_063668998.1  peroxisome proliferator-activated receptor delta isoform X4

  18. XM_063812906.1 → XP_063668976.1  peroxisome proliferator-activated receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A2J8NYZ0, A0A6D2WBY5, H2R2N3

  19. XM_063812931.1 → XP_063669001.1  peroxisome proliferator-activated receptor delta isoform X5

    UniProtKB/TrEMBL
    K7CUN0

  20. XM_016955311.4 → XP_016810800.1  peroxisome proliferator-activated receptor delta isoform X2

    Conserved Domains (2) summary
    cd06932
    Location:135 → 402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57 → 118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  21. XM_063812915.1 → XP_063668985.1  peroxisome proliferator-activated receptor delta isoform X2

  22. XM_063812927.1 → XP_063668997.1  peroxisome proliferator-activated receptor delta isoform X4

  23. XM_063812909.1 → XP_063668979.1  peroxisome proliferator-activated receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A2J8NYZ0, A0A6D2WBY5, H2R2N3

  24. XM_063812930.1 → XP_063669000.1  peroxisome proliferator-activated receptor delta isoform X4

  25. XM_063812916.1 → XP_063668986.1  peroxisome proliferator-activated receptor delta isoform X2

  26. XM_063812912.1 → XP_063668982.1  peroxisome proliferator-activated receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A2J8NYZ0, A0A6D2WBY5, H2R2N3

  27. XM_063812908.1 → XP_063668978.1  peroxisome proliferator-activated receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A2J8NYZ0, A0A6D2WBY5, H2R2N3

  28. XM_063812910.1 → XP_063668980.1  peroxisome proliferator-activated receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A2J8NYZ0, A0A6D2WBY5, H2R2N3

  29. XM_063812922.1 → XP_063668992.1  peroxisome proliferator-activated receptor delta isoform X3

  30. XM_063812917.1 → XP_063668987.1  peroxisome proliferator-activated receptor delta isoform X2

  31. XM_063812921.1 → XP_063668991.1  peroxisome proliferator-activated receptor delta isoform X3

  32. XM_063812929.1 → XP_063668999.1  peroxisome proliferator-activated receptor delta isoform X4

  33. XM_016955313.4 → XP_016810802.1  peroxisome proliferator-activated receptor delta isoform X2

    Conserved Domains (2) summary
    cd06932
    Location:135 → 402
    NR_LBD_PPAR; The ligand binding domain of peroxisome proliferator-activated receptors
    cl02596
    Location:57 → 118
    NR_DBD_like; DNA-binding domain of nuclear receptors is composed of two C4-type zinc fingers

  34. XM_063812911.1 → XP_063668981.1  peroxisome proliferator-activated receptor delta isoform X1

    UniProtKB/TrEMBL
    A0A2J8NYZ0, A0A6D2WBY5, H2R2N3
Nucleotide Protein
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