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EGF epidermal growth factor [ Pan troglodytes (chimpanzee) ]

Gene ID: 461435, updated on 6-Jun-2024

Summary

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Official Symbol
EGFprovided by VGNC
Official Full Name
epidermal growth factorprovided by VGNC
Primary source
VGNC:VGNC:10856
Locus tag
CK820_G0024081
See related
Ensembl:ENSPTRG00000016367
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See EGF in Genome Data Viewer
Location:
chromosome: 4
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (111369488..111470783)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (111369462..111470759)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene leucine rich repeat, Ig-like and transmembrane domains 3 Neighboring gene keratin, type I cytoskeletal 19-like Neighboring gene U6 spliceosomal RNA Neighboring gene ELOVL fatty acid elongase 6 Neighboring gene uncharacterized LOC107974370 Neighboring gene heat shock factor-binding protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pro-epidermal growth factor
Names
epidermal growth factor (beta-urogastrone)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    111369488..111470783
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054683287.2 → XP_054539262.1  pro-epidermal growth factor isoform X6

    UniProtKB/TrEMBL
    A0A2I3SGY9

  2. XM_054683289.2 → XP_054539264.1  pro-epidermal growth factor isoform X10

    UniProtKB/TrEMBL
    A0A2I3SGY9

  3. XM_054683284.2 → XP_054539259.1  pro-epidermal growth factor isoform X1

    UniProtKB/TrEMBL
    A0A2J8M2A8

  4. XM_024356188.3 → XP_024211956.2  pro-epidermal growth factor isoform X4

    UniProtKB/TrEMBL
    A0A2J8M2A8

  5. XM_054683285.2 → XP_054539260.1  pro-epidermal growth factor isoform X2

    UniProtKB/TrEMBL
    A0A2J8M2A8

  6. XM_016952025.4 → XP_016807514.3  pro-epidermal growth factor isoform X3

    UniProtKB/TrEMBL
    A0A2J8M2A8

  7. XM_009448135.5 → XP_009446410.4  pro-epidermal growth factor isoform X5

    UniProtKB/TrEMBL
    A0A2J8M2A8

  8. XM_517395.8 → XP_517395.5  pro-epidermal growth factor isoform X7

    UniProtKB/TrEMBL
    A0A2J8M2A8

  9. XM_054683290.1 → XP_054539265.1  pro-epidermal growth factor isoform X11

    UniProtKB/TrEMBL
    A0A2I3SGY9

  10. XM_024356189.3 → XP_024211957.2  pro-epidermal growth factor isoform X15

    UniProtKB/TrEMBL
    A0A2I3SGY9

  11. XM_054683292.2 → XP_054539267.1  pro-epidermal growth factor isoform X14

    UniProtKB/TrEMBL
    A0A2I3SGY9

  12. XM_054683288.2 → XP_054539263.1  pro-epidermal growth factor isoform X9

    UniProtKB/TrEMBL
    A0A2J8M2A8

  13. XM_054683291.2 → XP_054539266.1  pro-epidermal growth factor isoform X12

    UniProtKB/TrEMBL
    A0A2J8M2A8

  14. XM_016952029.4 → XP_016807518.3  pro-epidermal growth factor isoform X8

    UniProtKB/TrEMBL
    A0A2J8M2A8

  15. XM_063809740.1 → XP_063665810.1  pro-epidermal growth factor isoform X12

    UniProtKB/TrEMBL
    A0A2J8M2A8

  16. XM_016952032.4 → XP_016807521.3  pro-epidermal growth factor isoform X13

    UniProtKB/TrEMBL
    A0A2J8M2A8
Nucleotide Protein
Heading Accession and Version

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