PYGM glycogen phosphorylase, muscle associated [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: PYGMprovided by VGNC
Official Full Name: glycogen phosphorylase, muscle associatedprovided by VGNC
Primary source: VGNC:VGNC:57279
Locus tag: CK820_G0034008
See related: Ensembl:ENSPTRG00000003845
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 11

Exon count:: 20

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	9	NC_072407.2 (67065802..67079478, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	11	NC_072409.1 (66176563..66190247, complement)

Chromosome 9 - NC_072407.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Pathways from PubChem

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General gene information

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Markers

ECD19809 (e-PCR)
- UniSTS:300813

ECD14939 (e-PCR)
- UniSTS:295957

ECD19832 (e-PCR)
- UniSTS:300836

stSG635664 (e-PCR)
- UniSTS:460846

ECD02084 (e-PCR)
- UniSTS:283185

GDB:197858 (e-PCR)
- UniSTS:155972

ECD17817 (e-PCR)
- UniSTS:298829

RH93814 (e-PCR)
- UniSTS:92022

ECD22749 (e-PCR)
- UniSTS:303734

ECD05267 (e-PCR)
- UniSTS:286333

ECD04500 (e-PCR)
- UniSTS:285572

ECD00893 (e-PCR)
- UniSTS:282002

ECD23810 (e-PCR)
- UniSTS:304794

ECD13527 (e-PCR)
- UniSTS:294556

D11S4627 (e-PCR)
- UniSTS:64417

ECD14309 (e-PCR)
- UniSTS:295330

REN56291 (e-PCR)
- UniSTS:381091

ECD02718 (e-PCR)
- UniSTS:283812

REN56292 (e-PCR)
- UniSTS:381092

REN56293 (e-PCR)
- UniSTS:381093

REN56294 (e-PCR)
- UniSTS:381094

REN56295 (e-PCR)
- UniSTS:381095

REN56296 (e-PCR)
- UniSTS:381096

REN56297 (e-PCR)
- UniSTS:381097

REN56298 (e-PCR)
- UniSTS:381098

REN56299 (e-PCR)
- UniSTS:381099

REN56300 (e-PCR)
- UniSTS:381100

REN56301 (e-PCR)
- UniSTS:381101

REN56302 (e-PCR)
- UniSTS:381102

REN56303 (e-PCR)
- UniSTS:381103

REN56304 (e-PCR)
- UniSTS:381104

REN56305 (e-PCR)
- UniSTS:381105

REN56306 (e-PCR)
- UniSTS:381106

REN56307 (e-PCR)
- UniSTS:381107

REN56308 (e-PCR)
- UniSTS:381108

REN56309 (e-PCR)
- UniSTS:381109

ECD13812 (e-PCR)
- UniSTS:294838

REN56310 (e-PCR)
- UniSTS:381110

REN56311 (e-PCR)
- UniSTS:381111

REN56312 (e-PCR)
- UniSTS:381112

REN56313 (e-PCR)
- UniSTS:381113

REN56314 (e-PCR)
- UniSTS:381114

REN56315 (e-PCR)
- UniSTS:381115

REN56316 (e-PCR)
- UniSTS:381116

REN56317 (e-PCR)
- UniSTS:381117

REN56318 (e-PCR)
- UniSTS:381118

REN56319 (e-PCR)
- UniSTS:381119

REN56320 (e-PCR)
- UniSTS:381120

REN56321 (e-PCR)
- UniSTS:381121

REN56322 (e-PCR)
- UniSTS:381122

REN56323 (e-PCR)
- UniSTS:381123

ECD08684 (e-PCR)
- UniSTS:289732

REN56324 (e-PCR)
- UniSTS:381124

REN56326 (e-PCR)
- UniSTS:381126

REN56327 (e-PCR)
- UniSTS:381127

REN56328 (e-PCR)
- UniSTS:381128

REN56329 (e-PCR)
- UniSTS:381129

REN56330 (e-PCR)
- UniSTS:381130

REN56331 (e-PCR)
- UniSTS:381131

REN56332 (e-PCR)
- UniSTS:381132

REN56333 (e-PCR)
- UniSTS:381133

REN56334 (e-PCR)
- UniSTS:381134

REN56335 (e-PCR)
- UniSTS:381135

REN56336 (e-PCR)
- UniSTS:381136

REN56337 (e-PCR)
- UniSTS:381137

REN56338 (e-PCR)
- UniSTS:381138

REN56339 (e-PCR)
- UniSTS:381139

REN56340 (e-PCR)
- UniSTS:381140

REN56341 (e-PCR)
- UniSTS:381141

REN56342 (e-PCR)
- UniSTS:381142

REN56343 (e-PCR)
- UniSTS:381143

REN56344 (e-PCR)
- UniSTS:381144

REN56345 (e-PCR)
- UniSTS:381145

REN56346 (e-PCR)
- UniSTS:381146

REN56347 (e-PCR)
- UniSTS:381147

REN56348 (e-PCR)
- UniSTS:381148

G33090 (e-PCR)
- UniSTS:47592

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables glycogen phosphorylase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables pyridoxal phosphate binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in glycogen catabolic process	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: glycogen phosphorylase, muscle form

Names: phosphorylase, glycogen, muscle; phosphorylase, glycogen; muscle (McArdle syndrome, glycogen storage disease type V)

XP_009421690.2

EC 2.4.1.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

67065802..67079478 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_009423415.5 → XP_009421690.2 glycogen phosphorylase, muscle form

UniProtKB/TrEMBL

A0A2I3S7B5, A0A2J8QCN7, A0A6D2XIJ2, H2Q405, K6ZQR0

Related

ENSPTRP00000006629.4

Conserved Domains (1) summary

cd04300
Location:29 → 828

GT1_Glycogen_Phosphorylase; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of ...