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CTNND1 catenin delta 1 [ Gallus gallus (chicken) ]

Gene ID: 428852, updated on 5-Mar-2024

Summary

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Official Symbol
CTNND1provided by CGNC
Official Full Name
catenin delta 1provided by CGNC
Primary source
CGNC:53492
See related
Ensembl:ENSGALG00010026163
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
24
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (16497727..16524153, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (16457992..16484434, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene ciliary neurotrophic factor Neighboring gene ZFP91 ZFP91 zinc finger protein Neighboring gene leupaxin Neighboring gene uncharacterized LOC121106534 Neighboring gene BTB domain containing 18 Neighboring gene selenoprotein H Neighboring gene thioredoxin related transmembrane protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catenin delta-1
Names
catenin (cadherin-associated protein), delta 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    16497727..16524153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040701763.2 → XP_040557697.1  catenin delta-1 isoform X9

    Conserved Domains (2) summary
    smart00185
    Location:340 → 381
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:268 → 293
    ARM; armadillo repeat [structural motif]

  2. XM_015286851.4 → XP_015142337.1  catenin delta-1 isoform X8

    Conserved Domains (2) summary
    cd00020
    Location:263 → 381
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:268 → 293
    ARM; armadillo repeat [structural motif]

  3. XM_015286850.4 → XP_015142336.1  catenin delta-1 isoform X7

    Conserved Domains (2) summary
    cd00020
    Location:263 → 381
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:268 → 293
    ARM; armadillo repeat [structural motif]

  4. XM_046942368.1 → XP_046798324.1  catenin delta-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U1A5

  5. XM_015286845.4 → XP_015142331.1  catenin delta-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U1A5
    Related
    ENSGALP00010039317.1, ENSGALT00010063720.1
    Conserved Domains (2) summary
    cd00020
    Location:364 → 482
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  6. XM_046942371.1 → XP_046798327.1  catenin delta-1 isoform X4

    UniProtKB/TrEMBL
    A0A8V1A7W7

  7. XM_040701762.2 → XP_040557696.1  catenin delta-1 isoform X9

    Conserved Domains (2) summary
    smart00185
    Location:340 → 381
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:268 → 293
    ARM; armadillo repeat [structural motif]

  8. XM_015286849.4 → XP_015142335.1  catenin delta-1 isoform X7

    Conserved Domains (2) summary
    cd00020
    Location:263 → 381
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:268 → 293
    ARM; armadillo repeat [structural motif]

  9. XM_015286846.4 → XP_015142332.1  catenin delta-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U1A5
    Conserved Domains (2) summary
    cd00020
    Location:364 → 482
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  10. XM_040701761.1 → XP_040557695.1  catenin delta-1 isoform X5

    Conserved Domains (2) summary
    smart00185
    Location:441 → 482
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  11. XM_025151164.2 → XP_025006932.1  catenin delta-1 isoform X4

    UniProtKB/TrEMBL
    A0A8V1A7W7
    Related
    ENSGALP00010039319.1, ENSGALT00010063724.1
    Conserved Domains (2) summary
    smart00185
    Location:441 → 482
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  12. XM_015286848.2 → XP_015142334.1  catenin delta-1 isoform X2

    Conserved Domains (2) summary
    cd00020
    Location:364 → 482
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  13. XM_004941499.3 → XP_004941556.1  catenin delta-1 isoform X12

    UniProtKB/TrEMBL
    A0A8V1A0C3
    Related
    ENSGALP00010039320.1, ENSGALT00010063728.1
    Conserved Domains (2) summary
    cd00020
    Location:364 → 482
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  14. XM_004941498.3 → XP_004941555.1  catenin delta-1 isoform X11

    Conserved Domains (2) summary
    cd00020
    Location:364 → 482
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  15. XM_015286847.2 → XP_015142333.1  catenin delta-1 isoform X10

    Conserved Domains (2) summary
    cd00020
    Location:364 → 482
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  16. XM_015286844.2 → XP_015142330.1  catenin delta-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U1A5
    Conserved Domains (2) summary
    cd00020
    Location:364 → 482
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  17. XM_046942367.1 → XP_046798323.1  catenin delta-1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q2U1A5

  18. XM_046942372.1 → XP_046798328.1  catenin delta-1 isoform X6

  19. XM_046942369.1 → XP_046798325.1  catenin delta-1 isoform X3

  20. XM_046942374.1 → XP_046798330.1  catenin delta-1 isoform X7

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    16457992..16484434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040673198.2 → XP_040529132.1  catenin delta-1 isoform X9

    Conserved Domains (2) summary
    smart00185
    Location:340 → 381
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:268 → 293
    ARM; armadillo repeat [structural motif]

  2. XM_040673196.2 → XP_040529130.1  catenin delta-1 isoform X8

    Conserved Domains (2) summary
    smart00185
    Location:340 → 381
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:268 → 293
    ARM; armadillo repeat [structural motif]

  3. XM_040673194.2 → XP_040529128.1  catenin delta-1 isoform X7

    Conserved Domains (2) summary
    smart00185
    Location:340 → 381
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:268 → 293
    ARM; armadillo repeat [structural motif]

  4. XM_046919224.1 → XP_046775180.1  catenin delta-1 isoform X1

  5. XM_040673186.2 → XP_040529120.1  catenin delta-1 isoform X1

    Conserved Domains (2) summary
    smart00185
    Location:441 → 482
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  6. XM_040673197.2 → XP_040529131.1  catenin delta-1 isoform X9

    Conserved Domains (2) summary
    smart00185
    Location:340 → 381
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:268 → 293
    ARM; armadillo repeat [structural motif]

  7. XM_040673195.2 → XP_040529129.1  catenin delta-1 isoform X7

    Conserved Domains (2) summary
    smart00185
    Location:340 → 381
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:268 → 293
    ARM; armadillo repeat [structural motif]

  8. XM_040673187.2 → XP_040529121.1  catenin delta-1 isoform X1

    Conserved Domains (2) summary
    smart00185
    Location:441 → 482
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  9. XM_040673193.1 → XP_040529127.1  catenin delta-1 isoform X5

    Conserved Domains (2) summary
    smart00185
    Location:441 → 482
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  10. XM_040673192.1 → XP_040529126.1  catenin delta-1 isoform X4

    Conserved Domains (2) summary
    smart00185
    Location:441 → 482
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  11. XM_040673189.1 → XP_040529123.1  catenin delta-1 isoform X2

    Conserved Domains (2) summary
    smart00185
    Location:441 → 482
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  12. XM_040673185.1 → XP_040529119.1  catenin delta-1 isoform X1

    Conserved Domains (2) summary
    smart00185
    Location:441 → 482
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:369 → 394
    ARM; armadillo repeat [structural motif]

  13. XM_046919223.1 → XP_046775179.1  catenin delta-1 isoform X1

  14. XM_046919226.1 → XP_046775182.1  catenin delta-1 isoform X6

  15. XM_046919225.1 → XP_046775181.1  catenin delta-1 isoform X3

  16. XM_046919222.1 → XP_046775178.1  catenin delta-1 isoform X13

  17. XM_046919227.1 → XP_046775183.1  catenin delta-1 isoform X7

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001039327.1: Suppressed sequence

    Description
    NM_001039327.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: CTNND1 (GeneID:1500).
Nucleotide Protein Strain
Heading Accession and Version

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