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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001002943.3 → NP_001002943.2 presenilin-1 isoform 1
See identical proteins and their annotated locations for NP_001002943.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1, also known as I-466).
- Source sequence(s)
-
JAAUVH010000053
- UniProtKB/Swiss-Prot
- Q6RH31, Q6RH32
- UniProtKB/TrEMBL
- A0A8C0PFQ1, A0A8C0QV56, A0A8I3RZ86
- Conserved Domains (1) summary
-
- pfam01080
Location:75 → 456
- Presenilin
-
NM_001293284.2 → NP_001280213.1 presenilin-1 isoform 2
See identical proteins and their annotated locations for NP_001280213.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. It encodes isoform 2 (also known as I-462), which is shorter than isoform 1.
- Source sequence(s)
-
JAAUVH010000053
- UniProtKB/Swiss-Prot
- Q6RH31, Q6RH32
- Conserved Domains (1) summary
-
- pfam01080
Location:71 → 452
- Presenilin
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051812.1 Reference ROS_Cfam_1.0
- Range
-
46719986..46800157
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038672831.1 → XP_038528759.1 presenilin-1 isoform X1
- UniProtKB/Swiss-Prot
- Q6RH31, Q6RH32
- UniProtKB/TrEMBL
- A0A8C0PFQ1, A0A8C0QV56, A0A8I3RZ86
- Related
- ENSCAFP00845017053.1, ENSCAFT00845021689.1
- Conserved Domains (1) summary
-
- pfam01080
Location:75 → 456
- Presenilin
-
XM_038672834.1 → XP_038528762.1 presenilin-1 isoform X2
- UniProtKB/Swiss-Prot
- Q6RH31, Q6RH32
- Conserved Domains (1) summary
-
- pfam01080
Location:71 → 452
- Presenilin
-
XM_038672832.1 → XP_038528760.1 presenilin-1 isoform X1
- UniProtKB/Swiss-Prot
- Q6RH31, Q6RH32
- UniProtKB/TrEMBL
- A0A8C0PFQ1, A0A8C0QV56, A0A8I3RZ86
- Conserved Domains (1) summary
-
- pfam01080
Location:75 → 456
- Presenilin
-
XM_038672833.1 → XP_038528761.1 presenilin-1 isoform X1
- UniProtKB/Swiss-Prot
- Q6RH31, Q6RH32
- UniProtKB/TrEMBL
- A0A8C0PFQ1, A0A8C0QV56, A0A8I3RZ86
- Conserved Domains (1) summary
-
- pfam01080
Location:75 → 456
- Presenilin
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049268.1 Alternate UMICH_Zoey_3.1
- Range
-
46399068..46464638
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049749.1 Alternate UNSW_CanFamBas_1.0
- Range
-
46414872..46480438
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049229.1 Alternate UU_Cfam_GSD_1.0
- Range
-
46805794..46871397
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006590.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
46188004..46253311
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)