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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCz11 Primary Assembly
Genomic
-
NC_007127.7 Reference GRCz11 Primary Assembly
- Range
-
34913281..35329908 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_009292425.3 → XP_009290700.1 receptor-type tyrosine-protein phosphatase U isoform X9
- UniProtKB/Swiss-Prot
- B3DK56, Q6E5N7
- UniProtKB/TrEMBL
-
A0A8M3AQP8
- Conserved Domains (8) summary
-
- cd06263
Location:26 → 182
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00060
Location:282 → 353
- FN3; Fibronectin type 3 domain
- smart00194
Location:1168 → 1431
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00410
Location:192 → 278
- IG_like; Immunoglobulin like
- cd00047
Location:912 → 1136
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:489 → 584
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00102
Location:901 → 1136
- Y_phosphatase; Protein-tyrosine phosphatase
- pfam00629
Location:26 → 184
- MAM; MAM domain, meprin/A5/mu
-
XM_009292424.3 → XP_009290699.1 receptor-type tyrosine-protein phosphatase U isoform X8
- UniProtKB/Swiss-Prot
- B3DK56, Q6E5N7
- UniProtKB/TrEMBL
- A0A2R8QDT0, A0A8M3ATJ2
- Related
- ENSDARP00000151842.1, ENSDART00000184584.1
- Conserved Domains (8) summary
-
- cd06263
Location:26 → 182
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00060
Location:282 → 353
- FN3; Fibronectin type 3 domain
- smart00194
Location:1169 → 1432
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00410
Location:192 → 278
- IG_like; Immunoglobulin like
- cd00047
Location:913 → 1137
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:489 → 584
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00102
Location:902 → 1137
- Y_phosphatase; Protein-tyrosine phosphatase
- pfam00629
Location:26 → 184
- MAM; MAM domain, meprin/A5/mu
-
XM_009292420.3 → XP_009290695.1 receptor-type tyrosine-protein phosphatase U isoform X3
- UniProtKB/Swiss-Prot
- B3DK56, Q6E5N7
- UniProtKB/TrEMBL
-
A0A8M3AQP2
- Conserved Domains (8) summary
-
- cd06263
Location:26 → 182
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00060
Location:282 → 353
- FN3; Fibronectin type 3 domain
- smart00194
Location:1178 → 1441
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00410
Location:192 → 278
- IG_like; Immunoglobulin like
- cd00047
Location:922 → 1146
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:489 → 584
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00102
Location:911 → 1146
- Y_phosphatase; Protein-tyrosine phosphatase
- pfam00629
Location:26 → 184
- MAM; MAM domain, meprin/A5/mu
-
XM_021466633.1 → XP_021322308.1 receptor-type tyrosine-protein phosphatase U isoform X6
- UniProtKB/Swiss-Prot
- B3DK56, Q6E5N7
- UniProtKB/TrEMBL
-
A0A8M9P7S6
- Conserved Domains (6) summary
-
- cd06263
Location:26 → 182
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00060
Location:282 → 353
- FN3; Fibronectin type 3 domain
- smart00410
Location:192 → 278
- IG_like; Immunoglobulin like
- cd00047
Location:923 → 1140
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:384 → 480
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00041
Location:489 → 576
- fn3; Fibronectin type III domain
-
XM_009292419.3 → XP_009290694.1 receptor-type tyrosine-protein phosphatase U isoform X2
- UniProtKB/Swiss-Prot
- B3DK56, Q6E5N7
- UniProtKB/TrEMBL
-
A0A8M3ATI7
- Conserved Domains (8) summary
-
- cd06263
Location:26 → 182
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00060
Location:282 → 353
- FN3; Fibronectin type 3 domain
- smart00194
Location:1178 → 1441
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00410
Location:192 → 278
- IG_like; Immunoglobulin like
- cd00047
Location:923 → 1146
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:489 → 584
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00102
Location:923 → 1146
- Y_phosphatase; Protein-tyrosine phosphatase
- pfam00629
Location:26 → 184
- MAM; MAM domain, meprin/A5/mu
-
XM_009292421.3 → XP_009290696.1 receptor-type tyrosine-protein phosphatase U isoform X4
- UniProtKB/Swiss-Prot
- B3DK56, Q6E5N7
- UniProtKB/TrEMBL
-
A0A8M3AI73
- Conserved Domains (8) summary
-
- cd06263
Location:26 → 182
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00060
Location:282 → 353
- FN3; Fibronectin type 3 domain
- smart00194
Location:1176 → 1439
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00410
Location:192 → 278
- IG_like; Immunoglobulin like
- cd00047
Location:923 → 1144
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:489 → 584
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00102
Location:912 → 1144
- Y_phosphatase; Protein-tyrosine phosphatase
- pfam00629
Location:26 → 184
- MAM; MAM domain, meprin/A5/mu
-
XM_009292418.3 → XP_009290693.1 receptor-type tyrosine-protein phosphatase U isoform X1
- UniProtKB/Swiss-Prot
- B3DK56, Q6E5N7
- UniProtKB/TrEMBL
- A0A286YB08, A0A8M3AJ74
- Related
- ENSDARP00000144361.1, ENSDART00000174713.2
- Conserved Domains (8) summary
-
- cd06263
Location:26 → 182
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00060
Location:282 → 353
- FN3; Fibronectin type 3 domain
- smart00194
Location:1179 → 1442
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00410
Location:192 → 278
- IG_like; Immunoglobulin like
- cd00047
Location:923 → 1147
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:489 → 584
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00102
Location:912 → 1147
- Y_phosphatase; Protein-tyrosine phosphatase
- pfam00629
Location:26 → 184
- MAM; MAM domain, meprin/A5/mu
-
XM_009292422.3 → XP_009290697.1 receptor-type tyrosine-protein phosphatase U isoform X5
- UniProtKB/Swiss-Prot
- B3DK56, Q6E5N7
- UniProtKB/TrEMBL
- A0A0R4INY1, A0A8M3B1S4
- Related
- ENSDARP00000135991.1, ENSDART00000162518.2
- Conserved Domains (8) summary
-
- cd06263
Location:26 → 182
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00060
Location:282 → 353
- FN3; Fibronectin type 3 domain
- smart00194
Location:1173 → 1436
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00410
Location:192 → 278
- IG_like; Immunoglobulin like
- cd00047
Location:923 → 1141
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:489 → 584
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00102
Location:912 → 1141
- Y_phosphatase; Protein-tyrosine phosphatase
- pfam00629
Location:26 → 184
- MAM; MAM domain, meprin/A5/mu
-
XM_009292427.3 → XP_009290702.1 receptor-type tyrosine-protein phosphatase U isoform X11
- UniProtKB/Swiss-Prot
- B3DK56, Q6E5N7
- UniProtKB/TrEMBL
-
A0A8M3B1T0
- Conserved Domains (8) summary
-
- cd06263
Location:26 → 182
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00060
Location:282 → 353
- FN3; Fibronectin type 3 domain
- smart00194
Location:1159 → 1422
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00410
Location:192 → 278
- IG_like; Immunoglobulin like
- cd00047
Location:912 → 1127
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:489 → 584
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00102
Location:901 → 1127
- Y_phosphatase; Protein-tyrosine phosphatase
- pfam00629
Location:26 → 184
- MAM; MAM domain, meprin/A5/mu
-
XM_009292426.3 → XP_009290701.1 receptor-type tyrosine-protein phosphatase U isoform X10
- UniProtKB/Swiss-Prot
- B3DK56, Q6E5N7
- UniProtKB/TrEMBL
-
A0A8M3AI77
- Conserved Domains (8) summary
-
- cd06263
Location:26 → 182
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00060
Location:282 → 353
- FN3; Fibronectin type 3 domain
- smart00194
Location:1162 → 1425
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00410
Location:192 → 278
- IG_like; Immunoglobulin like
- cd00047
Location:912 → 1130
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:489 → 584
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00102
Location:901 → 1130
- Y_phosphatase; Protein-tyrosine phosphatase
- pfam00629
Location:26 → 184
- MAM; MAM domain, meprin/A5/mu
-
XM_009292423.3 → XP_009290698.1 receptor-type tyrosine-protein phosphatase U isoform X7
- UniProtKB/Swiss-Prot
- B3DK56, Q6E5N7
- UniProtKB/TrEMBL
-
A0A8M3AJ78
- Conserved Domains (8) summary
-
- cd06263
Location:26 → 182
- MAM; Meprin, A5 protein, and protein tyrosine phosphatase Mu (MAM) domain. MAM is an extracellular domain which mediates protein-protein interactions and is found in a diverse set of proteins, many of which are known to function in cell adhesion. Members ...
- smart00060
Location:282 → 353
- FN3; Fibronectin type 3 domain
- smart00194
Location:1172 → 1435
- PTPc; Protein tyrosine phosphatase, catalytic domain
- smart00410
Location:192 → 278
- IG_like; Immunoglobulin like
- cd00047
Location:922 → 1140
- PTPc; Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways. The depth of the active site cleft renders the enzyme specific for phosphorylated Tyr ...
- cd00063
Location:489 → 584
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam00102
Location:911 → 1140
- Y_phosphatase; Protein-tyrosine phosphatase
- pfam00629
Location:26 → 184
- MAM; MAM domain, meprin/A5/mu