U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Eef1a2 eukaryotic translation elongation factor 1 alpha 2 [ Mus musculus (house mouse) ]

Gene ID: 13628, updated on 11-Apr-2024

Summary

Official Symbol
Eef1a2provided by MGI
Official Full Name
eukaryotic translation elongation factor 1 alpha 2provided by MGI
Primary source
MGI:MGI:1096317
See related
Ensembl:ENSMUSG00000016349 AllianceGenome:MGI:1096317
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
S1; STN; wst; Eef1a; EEF1AL; wasted; EF-1-alpha-2
Summary
Enables translation elongation factor activity. Acts upstream of or within positive regulation of apoptotic process and translational elongation. Located in cytoplasm. Part of eukaryotic translation elongation factor 1 complex. Is active in synapse. Is expressed in several structures, including central nervous system; eye; genitourinary system; gut; and integumental system. Human ortholog(s) of this gene implicated in autosomal dominant non-syndromic intellectual disability 38; developmental and epileptic encephalopathy 33; and ovarian cancer. Orthologous to human EEF1A2 (eukaryotic translation elongation factor 1 alpha 2). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in heart adult (RPKM 359.9), cerebellum adult (RPKM 338.2) and 6 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
2 H4; 2 103.6 cM
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (180783551..180798808, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (181141758..181157015, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene cholinergic receptor, nicotinic, alpha polypeptide 4 Neighboring gene potassium voltage-gated channel, subfamily Q, member 2 Neighboring gene STARR-seq mESC enhancer starr_06747 Neighboring gene predicted gene, 24892 Neighboring gene pancreatic progenitor cell differentiation and proliferation factor

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Spontaneous (1) 
  • Endonuclease-mediated (3)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
enables translation elongation factor activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables translation elongation factor activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within positive regulation of apoptotic process IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of lipid kinase activity ISO
Inferred from Sequence Orthology
more info
 
involved_in translation IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in translational elongation IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within translational elongation IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
part_of eukaryotic translation elongation factor 1 complex IDA
Inferred from Direct Assay
more info
PubMed 
located_in myelin sheath HDA PubMed 
located_in neuronal cell body ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
is_active_in synapse EXP
Inferred from Experiment
more info
PubMed 
is_active_in synapse IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
elongation factor 1-alpha 2
Names
eukaryotic elongation factor 1 A-2
statin-S1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_007906.3NP_031932.1  elongation factor 1-alpha 2

    See identical proteins and their annotated locations for NP_031932.1

    Status: VALIDATED

    Source sequence(s)
    AL450341, BC018235, BC060606, BE656626
    Consensus CDS
    CCDS17201.1
    UniProtKB/Swiss-Prot
    P27706, P62631
    UniProtKB/TrEMBL
    Q3TII3, Q3UA81, Q3UZQ3
    Related
    ENSMUSP00000054556.8, ENSMUST00000055990.8
    Conserved Domains (1) summary
    PTZ00141
    Location:1460
    PTZ00141; elongation factor 1- alpha; Provisional

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    180783551..180798808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)