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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ROS_Cfam_1.0
Genomic
-
NC_051822.1 Reference ROS_Cfam_1.0
- Range
-
50355437..50463484 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038424758.1 → XP_038280686.1 low-density lipoprotein receptor-related protein 5 isoform X1
- UniProtKB/TrEMBL
- A0A8I3MW87, A0A8P0NCW3
- Conserved Domains (7) summary
-
- smart00135
Location:399 → 441
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:1337 → 1371
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd05819
Location:711 → 747
- NHL; NHL repeat [structural motif]
- cl18310
Location:676 → 869
- NHL; NHL repeat unit of beta-propeller proteins
- pfam00057
Location:1249 → 1286
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00058
Location:154 → 194
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam14670
Location:290 → 327
- FXa_inhibition; Coagulation Factor Xa inhibitory site
-
XM_038424759.1 → XP_038280687.1 low-density lipoprotein receptor-related protein 5 isoform X2
- UniProtKB/TrEMBL
- A0A8C0P854, A0A8C0QTW6, A0A8I3MW87, A0A8P0NCW3
- Related
- ENSCAFP00845010656.1, ENSCAFT00845013723.1
- Conserved Domains (7) summary
-
- smart00135
Location:399 → 441
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:1327 → 1361
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd05819
Location:711 → 747
- NHL; NHL repeat [structural motif]
- cl18310
Location:676 → 869
- NHL; NHL repeat unit of beta-propeller proteins
- pfam00057
Location:1249 → 1286
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00058
Location:154 → 194
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam14670
Location:290 → 327
- FXa_inhibition; Coagulation Factor Xa inhibitory site
Alternate UMICH_Zoey_3.1
Genomic
-
NC_049278.1 Alternate UMICH_Zoey_3.1
- Range
-
49575315..49682550 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038501015.1 → XP_038356943.1 low-density lipoprotein receptor-related protein 5 isoform X1
- Conserved Domains (7) summary
-
- smart00135
Location:399 → 441
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:1337 → 1371
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd05819
Location:711 → 747
- NHL; NHL repeat [structural motif]
- cl18310
Location:676 → 869
- NHL; NHL repeat unit of beta-propeller proteins
- pfam00057
Location:1249 → 1286
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00058
Location:154 → 194
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam14670
Location:290 → 327
- FXa_inhibition; Coagulation Factor Xa inhibitory site
-
XM_038501016.1 → XP_038356944.1 low-density lipoprotein receptor-related protein 5 isoform X2
- Conserved Domains (7) summary
-
- smart00135
Location:399 → 441
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:1327 → 1361
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd05819
Location:711 → 747
- NHL; NHL repeat [structural motif]
- cl18310
Location:676 → 869
- NHL; NHL repeat unit of beta-propeller proteins
- pfam00057
Location:1249 → 1286
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00058
Location:154 → 194
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam14670
Location:290 → 327
- FXa_inhibition; Coagulation Factor Xa inhibitory site
Alternate UNSW_CanFamBas_1.0
Genomic
-
NC_049759.1 Alternate UNSW_CanFamBas_1.0
- Range
-
49149276..49256627 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038627817.1 → XP_038483745.1 low-density lipoprotein receptor-related protein 5 isoform X1
- Conserved Domains (7) summary
-
- smart00135
Location:399 → 441
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:1337 → 1371
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd05819
Location:711 → 747
- NHL; NHL repeat [structural motif]
- cl18310
Location:676 → 869
- NHL; NHL repeat unit of beta-propeller proteins
- pfam00057
Location:1249 → 1286
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00058
Location:154 → 194
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam14670
Location:290 → 327
- FXa_inhibition; Coagulation Factor Xa inhibitory site
-
XM_038627818.1 → XP_038483746.1 low-density lipoprotein receptor-related protein 5 isoform X2
- Conserved Domains (7) summary
-
- smart00135
Location:399 → 441
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:1327 → 1361
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd05819
Location:711 → 747
- NHL; NHL repeat [structural motif]
- cl18310
Location:676 → 869
- NHL; NHL repeat unit of beta-propeller proteins
- pfam00057
Location:1249 → 1286
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00058
Location:154 → 194
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam14670
Location:290 → 327
- FXa_inhibition; Coagulation Factor Xa inhibitory site
Alternate UU_Cfam_GSD_1.0
Genomic
-
NC_049239.1 Alternate UU_Cfam_GSD_1.0
- Range
-
49942316..50049714 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038563697.1 → XP_038419625.1 low-density lipoprotein receptor-related protein 5 isoform X1
- UniProtKB/TrEMBL
- A0A8I3MW87, A0A8P0NCW3
- Conserved Domains (7) summary
-
- smart00135
Location:399 → 441
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:1337 → 1371
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd05819
Location:711 → 747
- NHL; NHL repeat [structural motif]
- cl18310
Location:676 → 869
- NHL; NHL repeat unit of beta-propeller proteins
- pfam00057
Location:1249 → 1286
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00058
Location:154 → 194
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam14670
Location:290 → 327
- FXa_inhibition; Coagulation Factor Xa inhibitory site
-
XM_038563698.1 → XP_038419626.1 low-density lipoprotein receptor-related protein 5 isoform X2
- UniProtKB/TrEMBL
- A0A8C0P854, A0A8C0QTW6, A0A8I3MW87, A0A8P0NCW3
- Conserved Domains (7) summary
-
- smart00135
Location:399 → 441
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:1327 → 1361
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd05819
Location:711 → 747
- NHL; NHL repeat [structural motif]
- cl18310
Location:676 → 869
- NHL; NHL repeat unit of beta-propeller proteins
- pfam00057
Location:1249 → 1286
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00058
Location:154 → 194
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam14670
Location:290 → 327
- FXa_inhibition; Coagulation Factor Xa inhibitory site
Alternate Dog10K_Boxer_Tasha Primary Assembly
Genomic
-
NC_006600.4 Alternate Dog10K_Boxer_Tasha Primary Assembly
- Range
-
48048981..48156123 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_038453948.1 → XP_038309876.1 low-density lipoprotein receptor-related protein 5 isoform X1
- UniProtKB/TrEMBL
- A0A8I3MW87, A0A8P0NCW3
- Conserved Domains (7) summary
-
- smart00135
Location:399 → 441
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:1337 → 1371
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd05819
Location:711 → 747
- NHL; NHL repeat [structural motif]
- cl18310
Location:676 → 869
- NHL; NHL repeat unit of beta-propeller proteins
- pfam00057
Location:1249 → 1286
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00058
Location:154 → 194
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam14670
Location:290 → 327
- FXa_inhibition; Coagulation Factor Xa inhibitory site
-
XM_038453949.1 → XP_038309877.1 low-density lipoprotein receptor-related protein 5 isoform X2
- UniProtKB/TrEMBL
- A0A8C0P854, A0A8C0QTW6, A0A8I3MW87, A0A8P0NCW3
- Conserved Domains (7) summary
-
- smart00135
Location:399 → 441
- LY; Low-density lipoprotein-receptor YWTD domain
- cd00112
Location:1327 → 1361
- LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
- cd05819
Location:711 → 747
- NHL; NHL repeat [structural motif]
- cl18310
Location:676 → 869
- NHL; NHL repeat unit of beta-propeller proteins
- pfam00057
Location:1249 → 1286
- Ldl_recept_a; Low-density lipoprotein receptor domain class A
- pfam00058
Location:154 → 194
- Ldl_recept_b; Low-density lipoprotein receptor repeat class B
- pfam14670
Location:290 → 327
- FXa_inhibition; Coagulation Factor Xa inhibitory site