Inositol 1,4,5-trisphosphate receptor itr-1 [Source:NCBI gene;Acc:177546]
Chromosome IV: 7,675,174-7,696,930 forward strand.
WBcel235:BX284604.4
This gene has 6 transcripts (splice variants), 12 orthologues and 1 paralogue.
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| F33D4.2a.1 | - | 8906 | 2892aa | F33D4.2a.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9Y0A1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F33D4.2e.1 | - | 8862 | 2857aa | F33D4.2e.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9Y0A1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F33D4.2f.1 | - | 8827 | 2846aa | F33D4.2f.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9Y0A1 | APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4, |
| F33D4.2h.1 | - | 8824 | 2867aa | F33D4.2h.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9Y0A1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F33D4.2d.1 | - | 8511 | 2836aa | F33D4.2d.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9Y0A1 | APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2, |
| F33D4.2g.1 | - | 5142 | 1713aa | F33D4.2g.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q9Y0A1 | - |
