Gene: Col4a1 ENSRNOG00000016281

Description

collagen type IV alpha 1 chain [Source:RGD Symbol;Acc:1307148]

Gene Synonyms

LOC290905

Location

mRatBN7.2:CM026989.1

About this gene

This gene has 2 transcripts (splice variants), 187 orthologues, 37 paralogues and is associated with 38 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSRNOT00000057386.3	Col4a1-201	6579	1669aa	ENSRNOP00000054197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MA59	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSRNOT00000114480.1	Col4a1-202	5514	1562aa	ENSRNOP00000091137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I6AFK7	-

Summary