Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CASK ENSBTAG00000020136

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Description

calcium/calmodulin dependent serine protein kinase [Source:VGNC Symbol;Acc:VGNC:26776]

Location

Primary_assembly X: 101,700,082-102,072,977 forward strand.

ARS-UCD1.3:CM008197.2

About this gene

This gene has 5 transcripts (splice variants), 267 orthologues and 7 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000090757.1	CASK-201	3413	955aa	ENSBTAP00000101528.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000071329.2	CASK-202	3329	927aa	ENSBTAP00000062140.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LPV4	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000026825.7	CASK-203	3275	909aa	ENSBTAP00000026825.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5D7B9	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000067007.2	CASK-204	3260	904aa	ENSBTAP00000057798.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LMD0	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000079216.2	CASK-205	3221	891aa	ENSBTAP00000067365.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1N8J3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Summary

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