Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
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Comparative Genomics
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- Orthologues
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Gene: GTF2A2 ENSBTAG00000010298

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Description

ral transcription factor IIA subunit 2 [Source:VGNC Symbol;Acc:VGNC:29692]

Location

Primary_assembly 10: 50,607,673-50,615,679 forward strand.

ARS-UCD1.3:CM008177.2

About this gene

This gene has 4 transcripts (splice variants) and 262 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000123995.1	GTF2A2-201	360	109aa	ENSBTAP00000086800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSBTAT00000097910.1	GTF2A2-203	1238	68aa	ENSBTAP00000099122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000013602.6	GTF2A2-202	624	106aa	ENSBTAP00000013602.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q32L01	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000092296.1	GTF2A2-204	498	74aa	ENSBTAP00000095496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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