Symbol:
Slc1a4
Name:
solute carrier family 1 member 4
RGD ID:
735146
Description:
Enables L-serine transmembrane transporter activity. Involved in L-serine transport. Located in dendrite and neuronal cell body. Human ortholog(s) of this gene implicated in spastic tetraplegia, thin corpus callosum, and progressive microcephaly. Orthologous to human SLC1A4 (solute carrier family 1 member 4); PARTICIPATES IN argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; citrullinemia pathway; INTERACTS WITH (+)-schisandrin B; 17beta-estradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
ASCT1; neutral amino acid transporter A; neutral amino acid transporter ASCT1; solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
SLC1A4 (solute carrier family 1 member 4) HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB
Mus musculus (house mouse):
Slc1a4 (solute carrier family 1 (glutamate/neutral amino acid transporter), member 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Slc1a4 (solute carrier family 1 member 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
SLC1A4 (solute carrier family 1 member 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Canis lupus familiaris (dog):
SLC1A4 (solute carrier family 1 member 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Slc1a4 (solute carrier family 1 member 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
SLC1A4 (solute carrier family 1 member 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
SLC1A4 (solute carrier family 1 member 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Slc1a4 (solute carrier family 1 member 4) Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Alliance orthologs 3
Homo sapiens (human):
SLC1A4 (solute carrier family 1 member 4)
Alliance
DIOPT (Ensembl Compara|HGNC|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Mus musculus (house mouse):
Slc1a4 (solute carrier family 1 (glutamate/neutral amino acid transporter), member 4)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Danio rerio (zebrafish):
slc1a4 (solute carrier family 1 member 4)
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Caenorhabditis elegans (roundworm):
glt-4
Alliance
DIOPT (Ensembl Compara|OrthoFinder|PANTHER)
Drosophila melanogaster (fruit fly):
Eaat1
Alliance
DIOPT (Ensembl Compara|OrthoFinder|PANTHER|PhylomeDB)
Xenopus tropicalis (tropical clawed frog):
slc1a4
Alliance
DIOPT (Ensembl Compara|Hieranoid|InParanoid|OMA|OrthoFinder|OrthoInspector|PANTHER|PhylomeDB|SonicParanoid)
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 14 98,718,646 - 98,761,672 (-) NCBI GRCr8 mRatBN7.2 14 94,530,801 - 94,560,190 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 14 94,529,084 - 94,560,418 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 14 98,877,394 - 98,907,056 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 14 100,117,664 - 100,147,323 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 14 96,585,031 - 96,614,695 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 14 104,582,884 - 104,612,417 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 14 104,581,190 - 104,612,597 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 14 104,317,800 - 104,345,829 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 14 101,123,740 - 101,153,790 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 14 101,142,950 - 101,173,001 (-) NCBI Celera 14 93,550,109 - 93,578,743 (-) NCBI Celera Cytogenetic Map 14 q22 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Slc1a4 Rat (+)-schisandrin B multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of SLC1A4 mRNA] CTD PMID:31150632 Slc1a4 Rat (1->4)-beta-D-glucan multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of SLC1A4 mRNA CTD PMID:36331819 Slc1a4 Rat 1,2-dimethylhydrazine increases expression ISO Slc1a4 (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in increased expression of SLC1A4 mRNA CTD PMID:22206623 Slc1a4 Rat 17alpha-ethynylestradiol multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of SLC1A4 mRNA CTD PMID:17942748 Slc1a4 Rat 17beta-estradiol increases expression ISO SLC1A4 (Homo sapiens) 6480464 Estradiol results in increased expression of SLC1A4 mRNA CTD PMID:15757668 more ... Slc1a4 Rat 17beta-estradiol increases expression ISO Slc1a4 (Mus musculus) 6480464 Estradiol results in increased expression of SLC1A4 mRNA CTD PMID:39298647 Slc1a4 Rat 17beta-estradiol increases expression EXP 6480464 Estradiol results in increased expression of SLC1A4 mRNA CTD PMID:32145629 Slc1a4 Rat 17beta-estradiol multiple interactions EXP 6480464 [bisphenol A co-treated with Estradiol] results in decreased expression of SLC1A4 mRNA CTD PMID:26496021 Slc1a4 Rat 17beta-estradiol multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 EGF protein promotes the reaction [Estradiol results in increased expression of SLC1A4 mRNA] CTD PMID:24758408 Slc1a4 Rat 2,2',4,4',5,5'-hexachlorobiphenyl decreases expression ISO Slc1a4 (Mus musculus) 6480464 2 more ... CTD PMID:20005886 Slc1a4 Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of SLC1A4 mRNA and [TIPARP gene mutant form results in increased susceptibility to Tetrachlorodibenzodioxin] which results in increased expression of SLC1A4 mRNA CTD PMID:17942748 and PMID:25975270 Slc1a4 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression EXP 6480464 Tetrachlorodibenzodioxin results in increased expression of SLC1A4 mRNA CTD PMID:32109520 and PMID:33387578 Slc1a4 Rat 2,3,7,8-tetrachlorodibenzodioxine multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [Tetrachlorodibenzodioxin co-treated with 2-methyl-2H-pyrazole-3-carboxylic acid (2-methyl-4-o-tolylazophenyl)amide] results in increased expression of SLC1A4 mRNA CTD PMID:29704546 Slc1a4 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Slc1a4 (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of SLC1A4 mRNA CTD PMID:21570461 and PMID:26377647 Slc1a4 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression EXP 6480464 Tetrachlorodibenzodioxin affects the expression of SLC1A4 mRNA CTD PMID:22298810 Slc1a4 Rat 2,3,7,8-tetrachlorodibenzodioxine increases expression ISO Slc1a4 (Mus musculus) 6480464 Tetrachlorodibenzodioxin results in increased expression of SLC1A4 mRNA CTD PMID:19465110 more ... Slc1a4 Rat 2,3,7,8-Tetrachlorodibenzofuran decreases expression EXP 6480464 2 more ... CTD PMID:32109520 Slc1a4 Rat 2,4-dibromophenyl 2,4,5-tribromophenyl ether increases expression ISO SLC1A4 (Homo sapiens) 6480464 2 more ... CTD PMID:26705709 Slc1a4 Rat 3,3',4,4',5-pentachlorobiphenyl increases expression EXP 6480464 3 more ... CTD PMID:23196670 Slc1a4 Rat 3,4-methylenedioxymethamphetamine increases expression ISO Slc1a4 (Mus musculus) 6480464 N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of SLC1A4 mRNA CTD PMID:20188158 Slc1a4 Rat 3-chloropropane-1,2-diol decreases expression EXP 6480464 alpha-Chlorohydrin results in decreased expression of SLC1A4 mRNA CTD PMID:28522335 Slc1a4 Rat 3-chloropropane-1,2-diol increases expression EXP 6480464 alpha-Chlorohydrin results in increased expression of SLC1A4 protein CTD PMID:34915118 Slc1a4 Rat 4-hydroxyphenyl retinamide decreases expression ISO Slc1a4 (Mus musculus) 6480464 Fenretinide results in decreased expression of SLC1A4 mRNA CTD PMID:28973697 Slc1a4 Rat 6-propyl-2-thiouracil increases expression EXP 6480464 Propylthiouracil results in increased expression of SLC1A4 mRNA CTD PMID:24780913 Slc1a4 Rat acrylamide increases expression ISO SLC1A4 (Homo sapiens) 6480464 Acrylamide results in increased expression of SLC1A4 mRNA CTD PMID:32763439 Slc1a4 Rat aflatoxin B1 decreases expression ISO Slc1a4 (Mus musculus) 6480464 Aflatoxin B1 results in decreased expression of SLC1A4 mRNA CTD PMID:19770486 Slc1a4 Rat aflatoxin B1 decreases methylation ISO SLC1A4 (Homo sapiens) 6480464 Aflatoxin B1 results in decreased methylation of SLC1A4 gene CTD PMID:27153756 Slc1a4 Rat all-trans-retinoic acid decreases expression ISO SLC1A4 (Homo sapiens) 6480464 Tretinoin results in decreased expression of SLC1A4 mRNA CTD PMID:33167477 Slc1a4 Rat alpha-Zearalanol multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in increased expression of SLC1A4 mRNA CTD PMID:35163327 Slc1a4 Rat AM-251 increases expression ISO SLC1A4 (Homo sapiens) 6480464 AM 251 results in increased expression of SLC1A4 mRNA CTD PMID:16500647 Slc1a4 Rat andrographolide multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [andrographolide co-treated with beta-Naphthoflavone] results in increased expression of SLC1A4 mRNA CTD PMID:19737545 Slc1a4 Rat andrographolide increases expression ISO Slc1a4 (Mus musculus) 6480464 andrographolide results in increased expression of SLC1A4 mRNA CTD PMID:19737545 Slc1a4 Rat aristolochic acid A decreases expression ISO SLC1A4 (Homo sapiens) 6480464 aristolochic acid I results in decreased expression of SLC1A4 mRNA CTD PMID:33212167 Slc1a4 Rat arsenite(3-) increases expression ISO Slc1a4 (Mus musculus) 6480464 arsenite results in increased expression of SLC1A4 mRNA CTD PMID:33053406 Slc1a4 Rat benzo[a]pyrene increases expression ISO Slc1a4 (Mus musculus) 6480464 Benzo(a)pyrene results in increased expression of SLC1A4 mRNA CTD PMID:14625279 more ... Slc1a4 Rat benzo[a]pyrene increases methylation ISO SLC1A4 (Homo sapiens) 6480464 Benzo(a)pyrene results in increased methylation of SLC1A4 exon and Benzo(a)pyrene results in increased methylation of SLC1A4 promoter CTD PMID:27901495 Slc1a4 Rat benzo[a]pyrene increases expression ISO SLC1A4 (Homo sapiens) 6480464 Benzo(a)pyrene results in increased expression of SLC1A4 mRNA CTD PMID:30453624 and PMID:32234424 Slc1a4 Rat benzo[a]pyrene multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [Potassium Dichromate co-treated with potassium chromate(VI)] inhibits the reaction [Benzo(a)pyrene results in increased expression of SLC1A4 mRNA] CTD PMID:14625279 Slc1a4 Rat benzo[a]pyrene diol epoxide I decreases expression ISO SLC1A4 (Homo sapiens) 6480464 7 more ... CTD PMID:19150397 Slc1a4 Rat beta-lapachone increases expression ISO SLC1A4 (Homo sapiens) 6480464 beta-lapachone results in increased expression of SLC1A4 mRNA CTD PMID:38218311 Slc1a4 Rat beta-naphthoflavone multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [andrographolide co-treated with beta-Naphthoflavone] results in increased expression of SLC1A4 mRNA CTD PMID:19737545 Slc1a4 Rat bisphenol A increases expression ISO SLC1A4 (Homo sapiens) 6480464 bisphenol A results in increased expression of SLC1A4 mRNA CTD PMID:24901218 Slc1a4 Rat bisphenol A increases expression EXP 6480464 bisphenol A results in increased expression of SLC1A4 mRNA CTD PMID:32145629 Slc1a4 Rat bisphenol A affects expression ISO SLC1A4 (Homo sapiens) 6480464 bisphenol A affects the expression of SLC1A4 mRNA CTD PMID:30903817 Slc1a4 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of SLC1A4 mRNA CTD PMID:25181051 and PMID:34947998 Slc1a4 Rat bisphenol A multiple interactions EXP 6480464 [bisphenol A co-treated with Estradiol] results in decreased expression of SLC1A4 mRNA CTD PMID:26496021 Slc1a4 Rat bromobenzene increases expression EXP 6480464 bromobenzene results in increased expression of SLC1A4 mRNA CTD PMID:32479839 Slc1a4 Rat cadmium dichloride increases expression ISO SLC1A4 (Homo sapiens) 6480464 Cadmium Chloride results in increased expression of SLC1A4 mRNA CTD PMID:25596134 and PMID:38568856 Slc1a4 Rat cannabidiol increases expression ISO Slc1a4 (Mus musculus) 6480464 Cannabidiol results in increased expression of SLC1A4 mRNA CTD PMID:21542829 Slc1a4 Rat carbamazepine affects expression ISO SLC1A4 (Homo sapiens) 6480464 Carbamazepine affects the expression of SLC1A4 mRNA CTD PMID:25979313 Slc1a4 Rat chlordecone increases expression ISO Slc1a4 (Mus musculus) 6480464 Chlordecone results in increased expression of SLC1A4 mRNA CTD PMID:33711761 Slc1a4 Rat chloroacetaldehyde affects expression ISO SLC1A4 (Homo sapiens) 6480464 chloroacetaldehyde affects the expression of SLC1A4 mRNA CTD PMID:25596134 Slc1a4 Rat chlorpyrifos increases expression EXP 6480464 Chlorpyrifos results in increased expression of SLC1A4 mRNA CTD PMID:20600679 Slc1a4 Rat chlorpyrifos multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [Chlorpyrifos co-treated with NGF protein] results in increased expression of SLC1A4 mRNA CTD PMID:20600679 Slc1a4 Rat chromium(6+) multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [zinc chromate results in increased abundance of chromium hexavalent ion] which results in decreased expression of SLC1A4 mRNA CTD PMID:38479592 Slc1a4 Rat cidofovir anhydrous increases expression ISO SLC1A4 (Homo sapiens) 6480464 Cidofovir results in increased expression of SLC1A4 mRNA CTD PMID:25596134 Slc1a4 Rat cisplatin increases expression ISO SLC1A4 (Homo sapiens) 6480464 Cisplatin results in increased expression of SLC1A4 mRNA CTD PMID:27594783 Slc1a4 Rat cisplatin decreases expression ISO SLC1A4 (Homo sapiens) 6480464 Cisplatin results in decreased expression of SLC1A4 mRNA CTD PMID:25596134 Slc1a4 Rat cisplatin decreases phosphorylation ISO Slc1a4 (Mus musculus) 6480464 Cisplatin results in decreased phosphorylation of SLC1A4 protein CTD PMID:22006019 Slc1a4 Rat clodronic acid decreases expression ISO SLC1A4 (Homo sapiens) 6480464 Clodronic Acid results in decreased expression of SLC1A4 mRNA CTD PMID:25596134 Slc1a4 Rat clofibrate decreases expression ISO Slc1a4 (Mus musculus) 6480464 Clofibrate results in decreased expression of SLC1A4 mRNA CTD PMID:17585979 Slc1a4 Rat cobalt dichloride increases expression EXP 6480464 cobaltous chloride results in increased expression of SLC1A4 mRNA CTD PMID:24386269 Slc1a4 Rat cocaine affects expression EXP 6480464 Cocaine affects the expression of SLC1A4 mRNA CTD PMID:20187946 Slc1a4 Rat copper atom multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [NSC 689534 binds to Copper] which results in increased expression of SLC1A4 mRNA CTD PMID:20971185 Slc1a4 Rat copper(0) multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [NSC 689534 binds to Copper] which results in increased expression of SLC1A4 mRNA CTD PMID:20971185 Slc1a4 Rat copper(II) chloride increases expression ISO SLC1A4 (Homo sapiens) 6480464 cupric chloride results in increased expression of SLC1A4 mRNA CTD PMID:38568856 Slc1a4 Rat copper(II) sulfate increases expression ISO SLC1A4 (Homo sapiens) 6480464 Copper Sulfate results in increased expression of SLC1A4 mRNA CTD PMID:19549813 Slc1a4 Rat coumestrol increases expression ISO SLC1A4 (Homo sapiens) 6480464 Coumestrol results in increased expression of SLC1A4 mRNA CTD PMID:19167446 Slc1a4 Rat coumestrol multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [Coumestrol co-treated with 2 more ... CTD PMID:19167446 Slc1a4 Rat crocidolite asbestos decreases expression ISO SLC1A4 (Homo sapiens) 6480464 Asbestos and Crocidolite results in decreased expression of SLC1A4 mRNA CTD PMID:25351596 Slc1a4 Rat Cuprizon increases expression EXP 6480464 Cuprizone results in increased expression of SLC1A4 mRNA CTD PMID:26577399 and PMID:27523638 Slc1a4 Rat cyclosporin A increases expression ISO Slc1a4 (Mus musculus) 6480464 Cyclosporine results in increased expression of SLC1A4 mRNA CTD PMID:25224403 Slc1a4 Rat cyclosporin A increases expression EXP 6480464 Cyclosporine results in increased expression of SLC1A4 mRNA CTD PMID:25596134 Slc1a4 Rat cyclosporin A increases expression ISO SLC1A4 (Homo sapiens) 6480464 Cyclosporine results in increased expression of SLC1A4 mRNA CTD PMID:20106945 more ... Slc1a4 Rat DDE decreases expression ISO SLC1A4 (Homo sapiens) 6480464 Dichlorodiphenyl Dichloroethylene results in decreased expression of SLC1A4 mRNA CTD PMID:38568856 Slc1a4 Rat dexamethasone decreases expression ISO Slc1a4 (Mus musculus) 6480464 Dexamethasone results in decreased expression of SLC1A4 mRNA CTD PMID:22733784 Slc1a4 Rat diazinon multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [Diazinon co-treated with NGF protein] results in increased expression of SLC1A4 mRNA CTD PMID:20600679 Slc1a4 Rat dibutyl phthalate increases expression ISO Slc1a4 (Mus musculus) 6480464 Dibutyl Phthalate results in increased expression of SLC1A4 mRNA CTD PMID:21266533 Slc1a4 Rat diclofenac increases expression ISO Slc1a4 (Mus musculus) 6480464 Diclofenac results in increased expression of SLC1A4 mRNA CTD PMID:26934552 Slc1a4 Rat diclofenac decreases expression ISO Slc1a4 (Mus musculus) 6480464 Diclofenac results in decreased expression of SLC1A4 mRNA CTD PMID:35537566 Slc1a4 Rat diethyl maleate increases expression ISO Slc1a4 (Mus musculus) 6480464 diethyl maleate results in increased expression of SLC1A4 mRNA CTD PMID:25270620 Slc1a4 Rat dioxygen decreases expression ISO SLC1A4 (Homo sapiens) 6480464 Oxygen deficiency results in decreased expression of SLC1A4 mRNA CTD PMID:25596134 Slc1a4 Rat dorsomorphin multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ... CTD PMID:27188386 Slc1a4 Rat endosulfan increases expression EXP 6480464 Endosulfan results in increased expression of SLC1A4 mRNA CTD PMID:29391264 Slc1a4 Rat Enterolactone multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [Coumestrol co-treated with 2 and 3-bis(3'-hydroxybenzyl)butyrolactone] results in increased expression of SLC1A4 mRNA CTD PMID:19167446 Slc1a4 Rat ethanol increases expression EXP 6480464 Ethanol results in increased expression of SLC1A4 mRNA CTD PMID:20655511 Slc1a4 Rat ethanol increases expression ISO Slc1a4 (Mus musculus) 6480464 Ethanol results in increased expression of SLC1A4 mRNA CTD PMID:30319688 Slc1a4 Rat ethanol affects splicing ISO Slc1a4 (Mus musculus) 6480464 Ethanol affects the splicing of SLC1A4 mRNA CTD PMID:30319688 Slc1a4 Rat ethanol multiple interactions EXP 6480464 N-methyl-N-(6-methoxy-1-phenyl-1 more ... CTD PMID:20655511 Slc1a4 Rat ethyl methanesulfonate increases expression ISO SLC1A4 (Homo sapiens) 6480464 Ethyl Methanesulfonate results in increased expression of SLC1A4 mRNA CTD PMID:23649840 Slc1a4 Rat ethylparaben increases expression ISO SLC1A4 (Homo sapiens) 6480464 ethyl-p-hydroxybenzoate results in increased expression of SLC1A4 mRNA CTD PMID:37690743 Slc1a4 Rat fluoranthene multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [1-methylanthracene co-treated with fluoranthene] results in increased expression of SLC1A4 mRNA CTD PMID:28329830 Slc1a4 Rat fluoranthene increases expression ISO Slc1a4 (Mus musculus) 6480464 fluoranthene results in increased expression of SLC1A4 mRNA CTD PMID:28329830 Slc1a4 Rat formaldehyde increases expression ISO SLC1A4 (Homo sapiens) 6480464 Formaldehyde results in increased expression of SLC1A4 mRNA CTD PMID:27664576 Slc1a4 Rat FR900359 affects phosphorylation ISO SLC1A4 (Homo sapiens) 6480464 FR900359 affects the phosphorylation of SLC1A4 protein CTD PMID:37730182 Slc1a4 Rat genistein increases expression ISO SLC1A4 (Homo sapiens) 6480464 Genistein results in increased expression of SLC1A4 mRNA CTD PMID:15757668 and PMID:26865667 Slc1a4 Rat ibuprofen increases expression ISO SLC1A4 (Homo sapiens) 6480464 Ibuprofen results in increased expression of SLC1A4 mRNA CTD PMID:25596134 Slc1a4 Rat indole-3-methanol affects expression EXP 6480464 indole-3-carbinol affects the expression of SLC1A4 mRNA CTD PMID:21396975 Slc1a4 Rat lamivudine multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [Zidovudine co-treated with Lamivudine] results in increased expression of SLC1A4 mRNA CTD PMID:15784690 Slc1a4 Rat lead diacetate increases expression ISO Slc1a4 (Mus musculus) 6480464 lead acetate results in increased expression of SLC1A4 mRNA CTD PMID:25270620 Slc1a4 Rat lucanthone decreases expression ISO SLC1A4 (Homo sapiens) 6480464 Lucanthone results in decreased expression of SLC1A4 mRNA CTD PMID:21148553 Slc1a4 Rat mercury dibromide increases expression ISO SLC1A4 (Homo sapiens) 6480464 mercuric bromide results in increased expression of SLC1A4 mRNA CTD PMID:26272509 Slc1a4 Rat mercury dibromide multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of SLC1A4 mRNA CTD PMID:27188386 Slc1a4 Rat metformin increases expression EXP 6480464 Metformin results in increased expression of SLC1A4 mRNA CTD PMID:25596134 Slc1a4 Rat methoxychlor affects methylation EXP 6480464 Methoxychlor affects the methylation of SLC1A4 gene CTD PMID:35440735 Slc1a4 Rat methyl methanesulfonate increases expression ISO SLC1A4 (Homo sapiens) 6480464 Methyl Methanesulfonate results in increased expression of SLC1A4 mRNA CTD PMID:23649840 Slc1a4 Rat methylmercury chloride increases expression ISO SLC1A4 (Homo sapiens) 6480464 methylmercuric chloride results in increased expression of SLC1A4 mRNA CTD PMID:23179753 Slc1a4 Rat mitomycin C decreases expression ISO Slc1a4 (Mus musculus) 6480464 Mitomycin results in decreased expression of SLC1A4 mRNA CTD PMID:25270620 Slc1a4 Rat motexafin gadolinium multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 motexafin gadolinium affects the reaction [Zinc Acetate results in increased expression of SLC1A4 mRNA] CTD PMID:16357179 Slc1a4 Rat motexafin gadolinium increases expression ISO SLC1A4 (Homo sapiens) 6480464 motexafin gadolinium results in increased expression of SLC1A4 mRNA CTD PMID:16357179 Slc1a4 Rat N(4)-hydroxycytidine increases expression ISO Slc1a4 (Mus musculus) 6480464 N(4)-hydroxycytidine results in increased expression of SLC1A4 mRNA CTD PMID:37748715 Slc1a4 Rat N-methyl-4-phenylpyridinium increases expression ISO SLC1A4 (Homo sapiens) 6480464 1-Methyl-4-phenylpyridinium results in increased expression of SLC1A4 mRNA CTD PMID:24810058 Slc1a4 Rat N-nitrosodiethylamine multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [Diethylnitrosamine co-treated with Phenobarbital] results in increased expression of SLC1A4 mRNA CTD PMID:24535843 Slc1a4 Rat N-nitrosodiethylamine increases expression ISO Slc1a4 (Mus musculus) 6480464 Diethylnitrosamine results in increased expression of SLC1A4 mRNA CTD PMID:24535843 Slc1a4 Rat ochratoxin A decreases expression ISO SLC1A4 (Homo sapiens) 6480464 ochratoxin A results in decreased expression of SLC1A4 mRNA CTD PMID:30559759 Slc1a4 Rat orphenadrine affects expression EXP 6480464 Orphenadrine affects the expression of SLC1A4 mRNA CTD PMID:23665939 Slc1a4 Rat paracetamol increases expression ISO Slc1a4 (Mus musculus) 6480464 Acetaminophen results in increased expression of SLC1A4 mRNA CTD PMID:17585979 Slc1a4 Rat paracetamol increases expression EXP 6480464 Acetaminophen results in increased expression of SLC1A4 mRNA CTD PMID:32479839 and PMID:33387578 Slc1a4 Rat paracetamol increases expression ISO SLC1A4 (Homo sapiens) 6480464 Acetaminophen results in increased expression of SLC1A4 mRNA CTD PMID:29067470 Slc1a4 Rat paraquat increases expression EXP 6480464 Paraquat results in increased expression of SLC1A4 mRNA CTD PMID:32680482 Slc1a4 Rat perfluorononanoic acid increases expression ISO SLC1A4 (Homo sapiens) 6480464 perfluoro-n-nonanoic acid results in increased expression of SLC1A4 mRNA CTD PMID:32588087 Slc1a4 Rat perfluorooctane-1-sulfonic acid decreases expression EXP 6480464 perfluorooctane sulfonic acid results in decreased expression of SLC1A4 mRNA CTD PMID:31004706 Slc1a4 Rat perfluorooctane-1-sulfonic acid multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of SLC1A4 mRNA CTD PMID:36331819 Slc1a4 Rat perfluorooctane-1-sulfonic acid increases expression ISO SLC1A4 (Homo sapiens) 6480464 perfluorooctane sulfonic acid results in increased expression of SLC1A4 mRNA CTD PMID:32588087 and PMID:36864359 Slc1a4 Rat perfluorooctanoic acid multiple interactions EXP 6480464 [Zeranol co-treated with perfluorooctanoic acid] results in increased expression of SLC1A4 mRNA CTD PMID:35163327 Slc1a4 Rat phenformin increases expression EXP 6480464 Phenformin results in increased expression of SLC1A4 mRNA CTD PMID:31324951 Slc1a4 Rat phenobarbital multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [Diethylnitrosamine co-treated with Phenobarbital] results in increased expression of SLC1A4 mRNA CTD PMID:24535843 Slc1a4 Rat phenylmercury acetate increases expression ISO SLC1A4 (Homo sapiens) 6480464 Phenylmercuric Acetate results in increased expression of SLC1A4 mRNA CTD PMID:26272509 Slc1a4 Rat phenylmercury acetate multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of SLC1A4 mRNA CTD PMID:27188386 Slc1a4 Rat pirinixic acid multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [pirinixic acid binds to and results in increased activity of PPARA protein] which results in increased expression of SLC1A4 mRNA CTD PMID:19710929 Slc1a4 Rat pirinixic acid increases expression ISO Slc1a4 (Mus musculus) 6480464 pirinixic acid results in increased expression of SLC1A4 mRNA CTD PMID:20059764 and PMID:20813756 Slc1a4 Rat pirinixic acid multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [pirinixic acid binds to and results in increased activity of PPARA protein] which results in decreased expression of SLC1A4 mRNA and PPARA protein promotes the reaction [pirinixic acid results in increased expression of SLC1A4 mRNA] CTD PMID:19710929 and PMID:20059764 Slc1a4 Rat potassium chromate multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [Potassium Dichromate co-treated with potassium chromate(VI)] inhibits the reaction [Benzo(a)pyrene results in increased expression of SLC1A4 mRNA] CTD PMID:14625279 Slc1a4 Rat potassium dichromate multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [Potassium Dichromate co-treated with potassium chromate(VI)] inhibits the reaction [Benzo(a)pyrene results in increased expression of SLC1A4 mRNA] CTD PMID:14625279 Slc1a4 Rat progesterone increases expression ISO SLC1A4 (Homo sapiens) 6480464 Progesterone results in increased expression of SLC1A4 mRNA CTD PMID:21795739 Slc1a4 Rat propiconazole increases expression ISO Slc1a4 (Mus musculus) 6480464 propiconazole results in increased expression of SLC1A4 mRNA CTD PMID:21278054 Slc1a4 Rat prothioconazole increases expression ISO SLC1A4 (Homo sapiens) 6480464 prothioconazole results in increased expression of SLC1A4 mRNA CTD PMID:35048155 Slc1a4 Rat resveratrol multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [Coumestrol co-treated with resveratrol] results in increased expression of SLC1A4 mRNA CTD PMID:19167446 Slc1a4 Rat rotenone increases expression EXP 6480464 Rotenone results in increased expression of SLC1A4 mRNA CTD PMID:28374803 Slc1a4 Rat S-(1,2-dichlorovinyl)-L-cysteine increases expression ISO SLC1A4 (Homo sapiens) 6480464 S-(1 and 2-dichlorovinyl)cysteine results in increased expression of SLC1A4 mRNA CTD PMID:33725128 Slc1a4 Rat SB 431542 multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ... CTD PMID:27188386 Slc1a4 Rat silicon dioxide decreases expression ISO SLC1A4 (Homo sapiens) 6480464 Silicon Dioxide results in decreased expression of SLC1A4 mRNA CTD PMID:25351596 Slc1a4 Rat sinapic acid increases expression ISO Slc1a4 (Mus musculus) 6480464 sinapinic acid analog results in increased expression of SLC1A4 mRNA CTD PMID:36279966 Slc1a4 Rat sodium arsenite increases expression ISO SLC1A4 (Homo sapiens) 6480464 sodium arsenite results in increased expression of SLC1A4 mRNA CTD PMID:12760830 more ... Slc1a4 Rat sodium arsenite decreases expression ISO SLC1A4 (Homo sapiens) 6480464 sodium arsenite results in decreased expression of SLC1A4 mRNA CTD PMID:34032870 Slc1a4 Rat sodium arsenite increases expression ISO Slc1a4 (Mus musculus) 6480464 sodium arsenite results in increased expression of SLC1A4 mRNA CTD PMID:25270620 Slc1a4 Rat succimer multiple interactions ISO Slc1a4 (Mus musculus) 6480464 [Succimer co-treated with Magnetite Nanoparticles] results in decreased expression of SLC1A4 mRNA CTD PMID:26378955 Slc1a4 Rat sunitinib increases expression ISO SLC1A4 (Homo sapiens) 6480464 Sunitinib results in increased expression of SLC1A4 mRNA CTD PMID:31533062 Slc1a4 Rat tert-butyl hydroperoxide decreases expression ISO SLC1A4 (Homo sapiens) 6480464 tert-Butylhydroperoxide results in decreased expression of SLC1A4 mRNA CTD PMID:15336504 Slc1a4 Rat testosterone decreases expression ISO Slc1a4 (Mus musculus) 6480464 Testosterone results in decreased expression of SLC1A4 mRNA CTD PMID:20844152 Slc1a4 Rat tetrachloromethane affects expression ISO Slc1a4 (Mus musculus) 6480464 Carbon Tetrachloride affects the expression of SLC1A4 mRNA CTD PMID:17484886 Slc1a4 Rat tetrachloromethane increases expression ISO Slc1a4 (Mus musculus) 6480464 Carbon Tetrachloride results in increased expression of SLC1A4 mRNA CTD PMID:31919559 Slc1a4 Rat tetrachloromethane multiple interactions EXP 6480464 schizandrin B inhibits the reaction [Carbon Tetrachloride results in increased expression of SLC1A4 mRNA] CTD PMID:31150632 Slc1a4 Rat tetrachloromethane increases expression EXP 6480464 Carbon Tetrachloride results in increased expression of SLC1A4 mRNA CTD PMID:31150632 Slc1a4 Rat tetracycline increases expression ISO Slc1a4 (Mus musculus) 6480464 Tetracycline results in increased expression of SLC1A4 mRNA CTD PMID:16917069 Slc1a4 Rat thapsigargin increases expression ISO SLC1A4 (Homo sapiens) 6480464 Thapsigargin results in increased expression of SLC1A4 mRNA CTD PMID:22378314 and PMID:29453283 Slc1a4 Rat thifluzamide increases expression ISO SLC1A4 (Homo sapiens) 6480464 thifluzamide results in increased expression of SLC1A4 mRNA CTD PMID:33512557 Slc1a4 Rat thioacetamide increases expression EXP 6480464 Thioacetamide results in increased expression of SLC1A4 mRNA CTD PMID:34492290 Slc1a4 Rat thiram increases expression ISO SLC1A4 (Homo sapiens) 6480464 Thiram results in increased expression of SLC1A4 mRNA CTD PMID:38568856 Slc1a4 Rat titanium dioxide decreases methylation ISO Slc1a4 (Mus musculus) 6480464 titanium dioxide results in decreased methylation of SLC1A4 gene CTD PMID:35295148 Slc1a4 Rat titanium dioxide increases methylation ISO Slc1a4 (Mus musculus) 6480464 titanium dioxide results in increased methylation of SLC1A4 promoter CTD PMID:35295148 Slc1a4 Rat toluene affects expression EXP 6480464 Toluene affects the expression of SLC1A4 mRNA CTD PMID:18653662 Slc1a4 Rat trichloroethene increases expression EXP 6480464 Trichloroethylene results in increased expression of SLC1A4 mRNA CTD PMID:33387578 Slc1a4 Rat Triptolide increases expression ISO Slc1a4 (Mus musculus) 6480464 triptolide results in increased expression of SLC1A4 mRNA CTD PMID:32835833 Slc1a4 Rat trovafloxacin decreases expression ISO Slc1a4 (Mus musculus) 6480464 trovafloxacin results in decreased expression of SLC1A4 mRNA CTD PMID:35537566 Slc1a4 Rat tunicamycin increases expression ISO SLC1A4 (Homo sapiens) 6480464 Tunicamycin results in increased expression of SLC1A4 mRNA CTD PMID:22378314 more ... Slc1a4 Rat valproic acid affects expression ISO SLC1A4 (Homo sapiens) 6480464 Valproic Acid affects the expression of SLC1A4 mRNA CTD PMID:25979313 Slc1a4 Rat valproic acid multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of SLC1A4 mRNA CTD PMID:27188386 Slc1a4 Rat valproic acid increases expression ISO SLC1A4 (Homo sapiens) 6480464 Valproic Acid results in increased expression of SLC1A4 mRNA CTD PMID:23179753 more ... Slc1a4 Rat vanadium atom decreases expression ISO SLC1A4 (Homo sapiens) 6480464 Vanadium results in decreased expression of SLC1A4 mRNA CTD PMID:19000753 Slc1a4 Rat vanadium(0) decreases expression ISO SLC1A4 (Homo sapiens) 6480464 Vanadium results in decreased expression of SLC1A4 mRNA CTD PMID:19000753 Slc1a4 Rat vinclozolin decreases expression EXP 6480464 vinclozolin results in decreased expression of SLC1A4 mRNA CTD PMID:23034163 Slc1a4 Rat vorinostat decreases expression ISO SLC1A4 (Homo sapiens) 6480464 vorinostat results in decreased expression of SLC1A4 mRNA CTD PMID:27188386 Slc1a4 Rat zidovudine multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 [Zidovudine co-treated with Lamivudine] results in increased expression of SLC1A4 mRNA CTD PMID:15784690 Slc1a4 Rat zidovudine increases expression ISO SLC1A4 (Homo sapiens) 6480464 Zidovudine results in increased expression of SLC1A4 mRNA CTD PMID:24292225 Slc1a4 Rat zinc acetate increases expression ISO SLC1A4 (Homo sapiens) 6480464 Zinc Acetate results in increased expression of SLC1A4 mRNA CTD PMID:16357179 Slc1a4 Rat zinc acetate multiple interactions ISO SLC1A4 (Homo sapiens) 6480464 motexafin gadolinium affects the reaction [Zinc Acetate results in increased expression of SLC1A4 mRNA] CTD PMID:16357179 Slc1a4 Rat zinc atom increases expression ISO SLC1A4 (Homo sapiens) 6480464 Zinc deficiency results in increased expression of SLC1A4 mRNA CTD PMID:22171008 Slc1a4 Rat zinc(0) increases expression ISO SLC1A4 (Homo sapiens) 6480464 Zinc deficiency results in increased expression of SLC1A4 mRNA CTD PMID:22171008
Imported Annotations - SMPDB
(+)-schisandrin B (EXP) (1->4)-beta-D-glucan (ISO) 1,2-dimethylhydrazine (ISO) 17alpha-ethynylestradiol (ISO) 17beta-estradiol (EXP,ISO) 2,2',4,4',5,5'-hexachlorobiphenyl (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 2,3,7,8-Tetrachlorodibenzofuran (EXP) 2,4-dibromophenyl 2,4,5-tribromophenyl ether (ISO) 3,3',4,4',5-pentachlorobiphenyl (EXP) 3,4-methylenedioxymethamphetamine (ISO) 3-chloropropane-1,2-diol (EXP) 4-hydroxyphenyl retinamide (ISO) 6-propyl-2-thiouracil (EXP) acrylamide (ISO) aflatoxin B1 (ISO) all-trans-retinoic acid (ISO) alpha-Zearalanol (EXP) AM-251 (ISO) andrographolide (ISO) aristolochic acid A (ISO) arsenite(3-) (ISO) benzo[a]pyrene (ISO) benzo[a]pyrene diol epoxide I (ISO) beta-lapachone (ISO) beta-naphthoflavone (ISO) bisphenol A (EXP,ISO) bromobenzene (EXP) cadmium dichloride (ISO) cannabidiol (ISO) carbamazepine (ISO) chlordecone (ISO) chloroacetaldehyde (ISO) chlorpyrifos (EXP,ISO) chromium(6+) (ISO) cidofovir anhydrous (ISO) cisplatin (ISO) clodronic acid (ISO) clofibrate (ISO) cobalt dichloride (EXP) cocaine (EXP) copper atom (ISO) copper(0) (ISO) copper(II) chloride (ISO) copper(II) sulfate (ISO) coumestrol (ISO) crocidolite asbestos (ISO) Cuprizon (EXP) cyclosporin A (EXP,ISO) DDE (ISO) dexamethasone (ISO) diazinon (ISO) dibutyl phthalate (ISO) diclofenac (ISO) diethyl maleate (ISO) dioxygen (ISO) dorsomorphin (ISO) endosulfan (EXP) Enterolactone (ISO) ethanol (EXP,ISO) ethyl methanesulfonate (ISO) ethylparaben (ISO) fluoranthene (ISO) formaldehyde (ISO) FR900359 (ISO) genistein (ISO) ibuprofen (ISO) indole-3-methanol (EXP) lamivudine (ISO) lead diacetate (ISO) lucanthone (ISO) mercury dibromide (ISO) metformin (EXP) methoxychlor (EXP) methyl methanesulfonate (ISO) methylmercury chloride (ISO) mitomycin C (ISO) motexafin gadolinium (ISO) N(4)-hydroxycytidine (ISO) N-methyl-4-phenylpyridinium (ISO) N-nitrosodiethylamine (ISO) ochratoxin A (ISO) orphenadrine (EXP) paracetamol (EXP,ISO) paraquat (EXP) perfluorononanoic acid (ISO) perfluorooctane-1-sulfonic acid (EXP,ISO) perfluorooctanoic acid (EXP) phenformin (EXP) phenobarbital (ISO) phenylmercury acetate (ISO) pirinixic acid (ISO) potassium chromate (ISO) potassium dichromate (ISO) progesterone (ISO) propiconazole (ISO) prothioconazole (ISO) resveratrol (ISO) rotenone (EXP) S-(1,2-dichlorovinyl)-L-cysteine (ISO) SB 431542 (ISO) silicon dioxide (ISO) sinapic acid (ISO) sodium arsenite (ISO) succimer (ISO) sunitinib (ISO) tert-butyl hydroperoxide (ISO) testosterone (ISO) tetrachloromethane (EXP,ISO) tetracycline (ISO) thapsigargin (ISO) thifluzamide (ISO) thioacetamide (EXP) thiram (ISO) titanium dioxide (ISO) toluene (EXP) trichloroethene (EXP) Triptolide (ISO) trovafloxacin (ISO) tunicamycin (ISO) valproic acid (ISO) vanadium atom (ISO) vanadium(0) (ISO) vinclozolin (EXP) vorinostat (ISO) zidovudine (ISO) zinc acetate (ISO) zinc atom (ISO) zinc(0) (ISO)
Biological Process
acidic amino acid transport (IEA) chloride transmembrane transport (IEA) cognition (IEA,ISO) dicarboxylic acid transport (IEA) hydroxyproline transport (IEA,ISO) L-alanine import across plasma membrane (IEA,ISO) L-alanine transport (IEA,ISO) L-aspartate import across plasma membrane (IEA,ISO) L-cystine transport (ISO) L-serine import across plasma membrane (IEA,ISO) L-serine transport (IDA,IEA,IMP,ISO) proline transmembrane transport (IEA) proline transport (IEA,ISO) serine import across plasma membrane (IEA,ISO) threonine transport (IEA,ISO)
Molecular Function
acidic amino acid transmembrane transporter activity (IEA) chloride channel activity (IEA,ISO) L-alanine transmembrane transporter activity (IEA,ISO) L-amino acid transmembrane transporter activity (IEA) L-aspartate transmembrane transporter activity (IEA,ISO) L-cystine transmembrane transporter activity (ISO) L-hydroxyproline transmembrane transporter activity (IEA,ISO) L-proline transmembrane transporter activity (IEA,ISO) L-serine transmembrane transporter activity (IDA,IEA,IMP,ISO) L-threonine transmembrane transporter activity (IEA,ISO) neutral L-amino acid transmembrane transporter activity (IEA,ISO) symporter activity (IEA)
Slc1a4 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 14 98,718,646 - 98,761,672 (-) NCBI GRCr8 mRatBN7.2 14 94,530,801 - 94,560,190 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 14 94,529,084 - 94,560,418 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 14 98,877,394 - 98,907,056 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 14 100,117,664 - 100,147,323 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 14 96,585,031 - 96,614,695 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 14 104,582,884 - 104,612,417 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 14 104,581,190 - 104,612,597 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 14 104,317,800 - 104,345,829 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 14 101,123,740 - 101,153,790 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 14 101,142,950 - 101,173,001 (-) NCBI Celera 14 93,550,109 - 93,578,743 (-) NCBI Celera Cytogenetic Map 14 q22 NCBI
SLC1A4 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 2 64,988,479 - 65,023,865 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 2 64,988,477 - 65,023,865 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 2 65,215,613 - 65,250,999 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 2 65,070,098 - 65,104,503 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 2 65,128,244 - 65,162,648 NCBI Celera 2 65,061,957 - 65,097,385 (+) NCBI Celera Cytogenetic Map 2 p14 NCBI HuRef 2 64,949,345 - 64,984,802 (+) NCBI HuRef CHM1_1 2 65,146,566 - 65,181,989 (+) NCBI CHM1_1 T2T-CHM13v2.0 2 64,998,100 - 65,033,490 (+) NCBI T2T-CHM13v2.0
Slc1a4 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 20,252,180 - 20,282,713 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 11 20,252,180 - 20,282,713 (-) Ensembl GRCm39 Ensembl GRCm38 11 20,302,180 - 20,332,713 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 20,302,180 - 20,332,713 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 11 20,202,183 - 20,232,716 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 11 20,202,208 - 20,232,674 (-) NCBI MGSCv36 mm8 Celera 11 22,451,521 - 22,482,559 (-) NCBI Celera Cytogenetic Map 11 A3.1 NCBI cM Map 11 12.97 NCBI
Slc1a4 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955424 19,474,082 - 19,499,592 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955424 19,474,082 - 19,499,592 (-) NCBI ChiLan1.0 ChiLan1.0
SLC1A4 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 12 61,377,645 - 61,412,341 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 2A 61,380,650 - 61,416,291 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 2A 65,051,025 - 65,086,917 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 2A 66,177,835 - 66,212,249 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 2A 66,176,925 - 66,209,615 (+) Ensembl panpan1.1 panPan2
SLC1A4 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 10 64,482,840 - 64,508,288 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 10 64,483,060 - 64,505,747 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 10 64,369,739 - 64,394,932 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 10 65,493,157 - 65,518,318 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 10 65,492,613 - 65,518,315 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 10 65,172,083 - 65,197,216 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 10 65,480,918 - 65,503,851 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 10 65,774,013 - 65,799,174 (+) NCBI UU_Cfam_GSD_1.0
Slc1a4 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024406292 18,780,757 - 18,810,279 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936491 9,760,952 - 9,790,536 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936491 9,761,002 - 9,790,535 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
SLC1A4 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 3 76,938,107 - 76,970,508 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 3 76,938,102 - 76,970,519 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 3 80,747,982 - 80,754,397 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
SLC1A4 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 14 41,999,216 - 42,032,326 (-) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 14 41,999,064 - 42,032,288 (-) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666045 69,848,255 - 69,881,833 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Slc1a4
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Predicted Target Of
Count of predictions: 424 Count of miRNA genes: 235 Interacting mature miRNAs: 276 Transcripts: ENSRNOT00000007002 Prediction methods: Microtar, Miranda, Rnahybrid Result types: miRGate_prediction
1582201 Sffal2 Serum free fatty acids level QTL 2 4 0.0002 blood free fatty acid amount (VT:0001553) serum free fatty acids level (CMO:0000547) 14 92553886 95876975 Rat 9590294 Uminl4 Urine mineral level QTL 4 5.66 0.001 urine mineral amount (VT:0015086) urine electrolyte level (CMO:0000593) 14 55624247 100624247 Rat 631213 Bw60 Body weight QTL60 4.51 retroperitoneal fat pad mass (VT:0010430) retroperitoneal fat pad weight to body weight ratio (CMO:0000635) 14 79950921 95876975 Rat 2300197 Scl59 Serum cholesterol level QTL 59 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 14 55147478 100147478 Rat 631523 Pia13 Pristane induced arthritis QTL 13 3.3 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 14 40793460 98037301 Rat 1582259 Gluco23 Glucose level QTL 23 3.1 0.0008 blood glucose amount (VT:0000188) blood glucose level area under curve (AUC) (CMO:0000350) 14 70053989 104886043 Rat 634328 Hc5 Hypercalciuria QTL 5 2.3 urine calcium amount (VT:0002985) urine calcium excretion rate (CMO:0000763) 14 58184885 103184885 Rat 1582250 Gluco26 Glucose level QTL 26 3.3 0.0009 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 14 73415323 95876975 Rat 2317879 Alcrsp27 Alcohol response QTL 27 3.3 0.63 response to alcohol trait (VT:0010489) duration of loss of righting reflex (CMO:0002289) 14 56631369 101631369 Rat 1641900 Alcrsp11 Alcohol response QTL 11 alcohol metabolism trait (VT:0015089) blood ethanol level (CMO:0000535) 14 70053989 104886043 Rat 4889951 Bss92 Bone structure and strength QTL 92 3.9 tibia area (VT:1000281) tibia-fibula cortical bone total cross-sectional area (CMO:0001721) 14 82057471 95876975 Rat 631839 Niddm37 Non-insulin dependent diabetes mellitus QTL 37 3.37 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 14 11030622 95876975 Rat 9589034 Epfw11 Epididymal fat weight QTL 11 6 0.001 epididymal fat pad mass (VT:0010421) epididymal fat pad weight to body weight ratio (CMO:0000658) 14 55624247 100624247 Rat 1300136 Rf22 Renal function QTL 22 3.9 renal blood flow trait (VT:2000006) absolute change in renal vascular resistance (CMO:0001900) 14 42262529 95023211 Rat 1549834 Scl45 Serum cholesterol level QTL 45 5.8 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 14 50023211 95023211 Rat
Slc1a4
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 14 94,530,107 - 94,531,106 (+) MAPPER mRatBN7.2 Rnor_6.0 14 104,582,191 - 104,583,189 NCBI Rnor6.0 Rnor_5.0 14 104,317,107 - 104,318,105 UniSTS Rnor5.0 Celera 14 93,549,416 - 93,550,414 UniSTS Cytogenetic Map 14 q22 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
91
90
59
25
59
6
218
97
93
45
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31
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Ensembl Acc Id:
ENSRNOT00000007002 ⟹ ENSRNOP00000007002
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 14 94,529,084 - 94,560,418 (-) Ensembl Rnor_6.0 Ensembl 14 104,581,190 - 104,612,597 (-) Ensembl
RefSeq Acc Id:
NM_198763 ⟹ NP_942058
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 14 98,732,167 - 98,761,562 (-) NCBI mRatBN7.2 14 94,530,801 - 94,560,190 (-) NCBI Rnor_6.0 14 104,582,884 - 104,612,417 (-) NCBI Rnor_5.0 14 104,317,800 - 104,345,829 (-) NCBI RGSC_v3.4 14 101,123,740 - 101,153,790 (-) RGD Celera 14 93,550,109 - 93,578,743 (-) RGD
Sequence:
GGCGGGCAGCGACATGGAGGAGACCAACGGATACCTCGACGGCGCCCAGGCTCAGCCTGCGGCCCGTCCCCGAACGCCCGAGACGGGGACGAGCAAAGCGCAGCGCTGTGCTAGCTTTTTTCGGCGCA
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RefSeq Acc Id:
XM_063273236 ⟹ XP_063129306
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 14 98,718,646 - 98,761,672 (-) NCBI
RefSeq Acc Id:
NP_942058 ⟸ NM_198763
- UniProtKB:
Q76GL9 (UniProtKB/TrEMBL), A6JQ21 (UniProtKB/TrEMBL), A0A0F7R5I4 (UniProtKB/TrEMBL), F7F9N4 (UniProtKB/TrEMBL)
- Sequence:
MEETNGYLDGAQAQPAARPRTPETGTSKAQRCASFFRRNALVLLTVSGVLAGAGMGAALRGLQLTRTQITYLAFPGEMLLRMLRMIILPLVVCSLVSGAASLDASSLGRLGGIAVAYFGLTTLSASAL
hide sequence
Ensembl Acc Id:
ENSRNOP00000007002 ⟸ ENSRNOT00000007002
RefSeq Acc Id:
XP_063129306 ⟸ XM_063273236
- Peptide Label:
isoform X1
RGD ID: 13699510 Promoter ID: EPDNEW_R10034 Type: initiation region Name: Slc1a4_1 Description: solute carrier family 1 member 4 SO ACC ID: SO:0000170 Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ ) Experiment Methods: Single-end sequencing. Position: Rat Assembly Chr Position (strand) Source Rnor_6.0 14 104,612,648 - 104,612,708 EPDNEW
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2016-02-25
Slc1a4
solute carrier family 1 member 4
Slc1a4
solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2004-09-10
Slc1a4
solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
Symbol and Name status set to approved
1299863 APPROVED
