Gsto1 (glutathione S-transferase omega 1) - Rat Genome Database

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Gene: Gsto1 (glutathione S-transferase omega 1) Rattus norvegicus
Analyze
Symbol: Gsto1
Name: glutathione S-transferase omega 1
RGD ID: 70952
Description: Enables glutathione dehydrogenase (ascorbate) activity. Involved in L-ascorbic acid biosynthetic process. Located in several cellular components, including basement membrane; cell body; and nuclear membrane. Human ortholog(s) of this gene implicated in Alzheimer's disease and Parkinson's disease. Orthologous to human GSTO1 (glutathione S-transferase omega 1); PARTICIPATES IN glutathione conjugation pathway; glutathione metabolic pathway; phase I biotransformation pathway via cytochrome P450; INTERACTS WITH 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine; 2,5-hexanedione.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: glutathione S-transferase omega 1-1; glutathione S-transferase omega-1; glutathione-dependent dehydroascorbate reductase; GSTO 1-1; GSTO-1; MGC94845; MMA(V) reductase; monomethylarsonic acid reductase; S-(Phenacyl)glutathione reductase; SPG-R
RGD Orthologs
Human
Mouse
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81256,662,377 - 256,672,515 (+)NCBIGRCr8
mRatBN7.21246,721,089 - 246,731,228 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1246,721,221 - 246,731,468 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1254,848,516 - 254,858,523 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01261,541,609 - 261,551,494 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01254,191,672 - 254,201,560 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01267,607,437 - 267,617,387 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1267,607,418 - 267,617,387 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01275,040,049 - 275,050,033 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41253,228,547 - 253,238,531 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11253,493,307 - 253,503,274 (+)NCBI
Celera1242,486,178 - 242,496,113 (+)NCBICelera
Cytogenetic Map1q54NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
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Original Reference(s)
Gsto1RatAlzheimer's disease no_associationISOGSTO1 (Homo sapiens)5490514DNA:polymorphism:exon:p. A140D (rs4925) (human)RGD 
Gsto1RatAlzheimer's disease susceptibilityISOGSTO1 (Homo sapiens)5490521DNA:polymorphism:exon:p. A140D (rs4925) (human)RGD 
Gsto1RatAlzheimer's disease onsetISOGSTO1 (Homo sapiens)1358651DNA:polymorphism:exon:p. A140D (rs4925) (human)RGD 
Gsto1RatCOVID-19  ISOGSTO1 (Homo sapiens)9068941mRNA:increased expression:peripheral blood mononuclear cell (human)RGDPMID:32228226 and REF_RGD_ID:28912744
Gsto1RatParkinson's disease susceptibilityISOGSTO1 (Homo sapiens)5490299DNA:polymorphism:exon:p. A140D (rs4925) (human)RGD 
Gsto1RatParkinson's disease onsetISOGSTO1 (Homo sapiens)1358651DNA:polymorphism:exon:p. A140D (rs4925) (human)RGD 
Gsto1RatSeasonal Allergic Rhinitis  ISOGSTO1 (Homo sapiens)5491008protein:decreased expression and T lymphocyte:RGD 
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Original Reference(s)
Gsto1Ratdesmoplastic/nodular medulloblastoma  ISOGSTO1 (Homo sapiens)8554872ClinVar Annotator: match by term: Desmoplastic/nodular medulloblastomaClinVarPMID:12068298
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Gsto1Ratautism spectrum disorder  ISOGSTO1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:35663546
Gsto1RatChemical and Drug Induced Liver Injury  ISOGSTO1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:25231249
Gsto1Ratdisease of cellular proliferation  ISOGSTO1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:21899313
Gsto1Ratesophagus squamous cell carcinoma  ISOGSTO1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:21517111
Gsto1Ratleukemia  ISOGSTO1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:22293942
Gsto1Ratlung disease  ISOGSTO1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:22293942
Gsto1Ratneurodegenerative disease  ISOGSTO1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:15964507
Gsto1Ratpre-malignant neoplasm  ISOGSTO1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:21472284
Gsto1RatProstatic Neoplasms  ISOGSTO1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:17013881
Gsto1Ratskin disease  ISOGSTO1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:17548696
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Original Reference(s)
Gsto1Rat(1->4)-beta-D-glucan multiple interactionsISOGsto1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of GSTO1 mRNACTDPMID:36331819
Gsto1Rat1,2-dimethylhydrazine decreases expressionISOGsto1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of GSTO1 mRNACTDPMID:22206623
Gsto1Rat1,2-dimethylhydrazine multiple interactionsISOGsto1 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of GSTO1 mRNACTDPMID:22206623
Gsto1Rat17alpha-ethynylestradiol increases expressionEXP 6480464Ethinyl Estradiol results in increased expression of GSTO1 mRNACTDPMID:12075121 and PMID:15576828
Gsto1Rat17beta-estradiol affects expressionISOGsto1 (Mus musculus)6480464Estradiol affects the expression of GSTO1 mRNACTDPMID:15598610 and PMID:39298647
Gsto1Rat17beta-estradiol increases expressionISOGsto1 (Mus musculus)6480464Estradiol results in increased expression of GSTO1 mRNACTDPMID:15289156
Gsto1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOGsto1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of GSTO1 mRNACTDPMID:21041162
Gsto1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of GSTO1 mRNACTDPMID:33387578 and PMID:34747641
Gsto1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOGsto1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of GSTO1 mRNACTDPMID:21570461
Gsto1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of GSTO1 mRNACTDPMID:21215274
Gsto1Rat2,4-dibromophenyl 2,4,5-tribromophenyl ether decreases expressionISOGsto1 (Mus musculus)64804642 more ...CTDPMID:18550172
Gsto1Rat2,5-hexanedione decreases expressionEXP 64804642 and 5-hexanedione results in decreased expression of GSTO1 proteinCTDPMID:15928459
Gsto1Rat2,6-dimethoxyphenol multiple interactionsISOGSTO1 (Homo sapiens)6480464[Sodium Chloride co-treated with pyrogallol 1 and 3-dimethyl ether] results in decreased expression of and affects the localization of GSTO1 proteinCTDPMID:38598786
Gsto1Rat2-bromohexadecanoic acid multiple interactionsISOGSTO1 (Homo sapiens)64804642-bromopalmitate inhibits the reaction [[Cadmium Chloride results in increased abundance of Cadmium] which results in increased palmitoylation of GSTO1 protein]CTDPMID:38195004
Gsto1Rat2-hydroxypropanoic acid increases expressionISOGSTO1 (Homo sapiens)6480464Lactic Acid results in increased expression of GSTO1 mRNACTDPMID:30851411
Gsto1Rat2-palmitoylglycerol increases expressionISOGSTO1 (Homo sapiens)64804642-palmitoylglycerol results in increased expression of GSTO1 mRNACTDPMID:37199045
Gsto1Rat3-isobutyl-1-methyl-7H-xanthine multiple interactionsISOGSTO1 (Homo sapiens)6480464[INS protein co-treated with Dexamethasone co-treated with 1-Methyl-3-isobutylxanthine co-treated with Indomethacin co-treated with bisphenol A] results in decreased expression of GSTO1 mRNACTDPMID:28628672
Gsto1Rat4,4'-sulfonyldiphenol increases expressionISOGsto1 (Mus musculus)6480464bisphenol S results in increased expression of GSTO1 mRNACTDPMID:39298647
Gsto1Rat4,4'-sulfonyldiphenol increases expressionISOGSTO1 (Homo sapiens)6480464bisphenol S results in increased expression of GSTO1 proteinCTDPMID:34186270
Gsto1Rat5-aza-2'-deoxycytidine multiple interactionsISOGsto1 (Mus musculus)6480464[Decitabine co-treated with trichostatin A] results in increased expression of GSTO1 mRNACTDPMID:19444856

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Biological Process
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Gsto1Ratcellular oxidant detoxification involved_inIEAGO:00451741600115GO_REF:0000108GOCGO_REF:0000108
Gsto1Ratcellular response to arsenic-containing substance involved_inISOGSTO1 (Homo sapiens)1624291 PMID:11511179RGDPMID:11511179
Gsto1Ratcellular response to arsenic-containing substance involved_inIEAUniProtKB:P78417 and ensembl:ENSP000003587271600115GO_REF:0000107EnsemblGO_REF:0000107
Gsto1Ratcellular response to arsenic-containing substance involved_inISSUniProtKB:P784171600115GO_REF:0000024UniProtGO_REF:0000024
Gsto1Ratglutathione metabolic process involved_inIEAUniRule:UR0015537741600115GO_REF:0000104UniProtGO_REF:0000104
Gsto1Ratglutathione metabolic process involved_inIBAFB:FBgn0035904 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Gsto1RatL-ascorbic acid biosynthetic process  IMP 70644 RGD 
Gsto1RatL-ascorbic acid metabolic process involved_inISSUniProtKB:P784171600115GO_REF:0000024UniProtGO_REF:0000024
Gsto1RatL-ascorbic acid metabolic process involved_inIBAPANTHER:PTN000136799 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Gsto1RatL-ascorbic acid metabolic process involved_inIEAUniProtKB:P78417 and ensembl:ENSP000003587271600115GO_REF:0000107EnsemblGO_REF:0000107
Gsto1RatL-ascorbic acid metabolic process involved_inISOGSTO1 (Homo sapiens)1624291 PMID:11511179RGDPMID:11511179
Gsto1Ratnegative regulation of release of sequestered calcium ion into cytosol involved_inIEAUniProtKB:P78417 and ensembl:ENSP000003587271600115GO_REF:0000107EnsemblGO_REF:0000107
Gsto1Ratnegative regulation of release of sequestered calcium ion into cytosol involved_inISOGSTO1 (Homo sapiens)1624291 PMID:11035031RGDPMID:11035031
Gsto1Ratpositive regulation of release of sequestered calcium ion into cytosol involved_inIEAUniProtKB:P78417 and ensembl:ENSP000003587271600115GO_REF:0000107EnsemblGO_REF:0000107
Gsto1Ratpositive regulation of release of sequestered calcium ion into cytosol involved_inISOGSTO1 (Homo sapiens)1624291 PMID:11035031RGDPMID:11035031
Gsto1Ratpositive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion involved_inIEAUniProtKB:P78417 and ensembl:ENSP000003587271600115GO_REF:0000107EnsemblGO_REF:0000107
Gsto1Ratpositive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion involved_inISOGSTO1 (Homo sapiens)1624291 PMID:11035031RGDPMID:11035031
Gsto1Ratregulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion involved_inISOGSTO1 (Homo sapiens)1624291 PMID:11035031RGDPMID:11035031
Gsto1Ratregulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion involved_inIEAUniProtKB:P78417 and ensembl:ENSP000003587271600115GO_REF:0000107EnsemblGO_REF:0000107
Gsto1Ratregulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum involved_inISOGSTO1 (Homo sapiens)1624291 PMID:11035031RGDPMID:11035031
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Cellular Component
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Gsto1Rataxon  IDA 5490519 RGD 
Gsto1Ratbasement membrane  IDA 5490519 RGD 
Gsto1Ratcell body  IDA 5490519 RGD 
Gsto1Ratcytoplasm located_inISOGSTO1 (Homo sapiens)1624291 PMID:11511179RGDPMID:11511179
Gsto1Ratcytoplasm is_active_inIBAFB:FBgn0035906 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Gsto1Ratcytoplasm located_inIEAInterPro:IPR0054421600115GO_REF:0000002InterProGO_REF:0000002
Gsto1Ratcytoplasm located_inIEAUniProtKB:P78417 and ensembl:ENSP000003587271600115GO_REF:0000107EnsemblGO_REF:0000107
Gsto1Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Gsto1Ratcytosol located_inIEAUniProtKB-SubCell:SL-00911600115GO_REF:0000044UniProtGO_REF:0000044
Gsto1Ratnuclear membrane  IDA 5490519 RGD 
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Molecular Function
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Gsto1Ratglutathione dehydrogenase (ascorbate) activity  IDA 70644 RGD 
Gsto1Ratglutathione dehydrogenase (ascorbate) activity enablesIEAUniRule:UR0015537741600115GO_REF:0000104UniProtGO_REF:0000104
Gsto1Ratglutathione dehydrogenase (ascorbate) activity enablesIEAEC:1.8.5.11600115GO_REF:0000003UniProtGO_REF:0000003
Gsto1Ratglutathione dehydrogenase (ascorbate) activity enablesIEARHEA:244241600115GO_REF:0000116RHEAGO_REF:0000116
Gsto1Ratglutathione dehydrogenase (ascorbate) activity enablesIEAUniProtKB:P78417 and ensembl:ENSP000003587271600115GO_REF:0000107EnsemblGO_REF:0000107
Gsto1Ratglutathione dehydrogenase (ascorbate) activity enablesIBAFB:FBgn0035904 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Gsto1Ratglutathione dehydrogenase (ascorbate) activity enablesIEAARBA:ARBA000284171600115GO_REF:0000117UniProtGO_REF:0000117
Gsto1Ratglutathione dehydrogenase (ascorbate) activity enablesISOGSTO1 (Homo sapiens)1624291 PMID:11511179RGDPMID:11511179
Gsto1Ratglutathione transferase activity enablesISSUniProtKB:P784171600115GO_REF:0000024UniProtGO_REF:0000024
Gsto1Ratglutathione transferase activity enablesIEAEC:2.5.1.181600115GO_REF:0000003UniProtGO_REF:0000003
Gsto1Ratglutathione transferase activity enablesIEAInterPro:IPR0054421600115GO_REF:0000002InterProGO_REF:0000002
Gsto1Ratglutathione transferase activity enablesIBAFB:FBgn0035904 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Gsto1Ratglutathione transferase activity enablesIEAUniProtKB:P78417 and ensembl:ENSP000003587271600115GO_REF:0000107EnsemblGO_REF:0000107
Gsto1Ratglutathione transferase activity enablesISOGSTO1 (Homo sapiens)1624291 PMID:11511179RGDPMID:11511179
Gsto1Ratglutathione transferase activity enablesIEAUniRule:UR0015537741600115GO_REF:0000104UniProtGO_REF:0000104
Gsto1Ratmethylarsonate reductase activity enablesIEARHEA:159691600115GO_REF:0000116RHEAGO_REF:0000116
Gsto1Ratmethylarsonate reductase activity enablesIEAEC:1.20.4.21600115GO_REF:0000003UniProtGO_REF:0000003
Gsto1Ratmethylarsonate reductase activity enablesIEAUniRule:UR0015537741600115GO_REF:0000104UniProtGO_REF:0000104
Gsto1Ratoxidoreductase activity enablesISOGSTO1 (Homo sapiens)1624291 PMID:11511179RGDPMID:11511179
Gsto1Ratoxidoreductase activity enablesIEAUniProtKB:P78417 and ensembl:ENSP000003587271600115GO_REF:0000107EnsemblGO_REF:0000107
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RGD Manual Annotations


  
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Gsto1Ratglutathione conjugation pathway  ISS 1358120 RGD 

Imported Annotations - KEGG (archival)

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Original Reference(s)
Gsto1Ratglutathione metabolic pathway  IEA 6907045 KEGGrno:00480
Gsto1Ratphase I biotransformation pathway via cytochrome P450  IEA 6907045 KEGGrno:00980
Gsto1Ratphase I biotransformation pathway via cytochrome P450  IEA 6907045 KEGGrno:00982

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Reference Title
Reference Citation
1. Toward protein biomarkers for allergy: CD4+ T cell proteomics in allergic and nonallergic subjects sampled in and out of pollen season. Bluggel M, etal., J Proteome Res. 2011 Apr 1;10(4):1558-70. Epub 2011 Mar 16.
2. Polymorphisms in glutathione S-transferase omega-1 gene and increased risk of sporadic Alzheimer disease. Capurso C, etal., Rejuvenation Res. 2010 Dec;13(6):645-52. Epub 2010 Sep 6.
3. Subcellular localization of a glutathione-dependent dehydroascorbate reductase within specific rat brain regions. Fornai F, etal., Neuroscience. 2001;104(1):15-31.
4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
5. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
6. Combined genealogical, mapping, and expression approaches to identify spontaneously hypertensive rat hypertension candidate genes. Hinojos CA, etal., Hypertension 2005 Apr;45(4):698-704. Epub 2005 Feb 14.
7. Molecular cloning and functional expression of rat liver glutathione-dependent dehydroascorbate reductase. Ishikawa T, etal., J Biol Chem 1998 Oct 30;273(44):28708-12.
8. Glutathione S-transferase omega-1 modifies age-at-onset of Alzheimer disease and Parkinson disease. Li YJ, etal., Hum Mol Genet 2003 Dec 15;12(24):3259-67. Epub 2003 Oct 21.
9. Purification and characterization of glutathione-dependent dehydroascorbate reductase from rat liver. Maellaro E, etal., Biochem J 1994 Jul 15;301 ( Pt 2):471-6.
10. Gene Data Set MGD Curation, June 12, 2002
11. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
12. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
13. Three SNPs in the GSTO1, GSTO2 and PRSS11 genes on chromosome 10 are not associated with age-at-onset of Alzheimer's disease. Ozturk A, etal., Neurobiol Aging. 2005 Aug-Sep;26(8):1161-5. Epub 2004 Dec 18.
14. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
15. GOA pipeline RGD automated data pipeline
16. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
17. Glutathione S-transferase: genetics and role in toxicology. Strange RC, etal., Toxicol Lett 2000 Mar 15;112-113:357-63.
18. Glutathione S-transferase mu, omega, pi, and theta class variants and smoking in Parkinson's disease. Wahner AD, etal., Neurosci Lett. 2007 Feb 21;413(3):274-8. Epub 2006 Dec 27.
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PMID:11035031   PMID:11511179   PMID:12477932   PMID:12928150   PMID:19056867   PMID:20458337   PMID:23376485   PMID:23533145   PMID:31505169   PMID:32057363  



Gsto1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81256,662,377 - 256,672,515 (+)NCBIGRCr8
mRatBN7.21246,721,089 - 246,731,228 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1246,721,221 - 246,731,468 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1254,848,516 - 254,858,523 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01261,541,609 - 261,551,494 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01254,191,672 - 254,201,560 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01267,607,437 - 267,617,387 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1267,607,418 - 267,617,387 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01275,040,049 - 275,050,033 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41253,228,547 - 253,238,531 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11253,493,307 - 253,503,274 (+)NCBI
Celera1242,486,178 - 242,496,113 (+)NCBICelera
Cytogenetic Map1q54NCBI
GSTO1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3810104,254,173 - 104,267,455 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl10104,235,356 - 104,267,459 (+)EnsemblGRCh38hg38GRCh38
GRCh3710106,013,931 - 106,027,213 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3610106,004,668 - 106,017,203 (+)NCBINCBI36Build 36hg18NCBI36
Build 3410106,004,667 - 106,017,199NCBI
Celera1099,754,787 - 99,768,056 (+)NCBICelera
Cytogenetic Map10q25.1NCBI
HuRef1099,645,735 - 99,659,002 (+)NCBIHuRef
CHM1_110106,297,838 - 106,311,108 (+)NCBICHM1_1
T2T-CHM13v2.010105,142,310 - 105,155,591 (+)NCBIT2T-CHM13v2.0
Gsto1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391947,843,412 - 47,853,229 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1947,843,409 - 47,853,229 (+)EnsemblGRCm39 Ensembl
GRCm381947,854,973 - 47,864,790 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1947,854,970 - 47,864,790 (+)EnsemblGRCm38mm10GRCm38
MGSCv371947,929,479 - 47,939,280 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361947,908,300 - 47,918,101 (+)NCBIMGSCv36mm8
Celera1948,615,471 - 48,625,281 (+)NCBICelera
Cytogenetic Map19D1NCBI
cM Map1940.41NCBI
GSTO1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v28116,140,609 - 116,153,570 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan110116,145,764 - 116,158,902 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v010100,853,682 - 100,866,892 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.110104,312,403 - 104,325,733 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl10104,313,024 - 104,325,733 (+)Ensemblpanpan1.1panPan2
GSTO1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12816,569,421 - 16,579,239 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2816,569,066 - 16,619,880 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2816,741,837 - 16,751,645 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02817,047,667 - 17,057,466 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2817,047,318 - 17,057,465 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12816,595,211 - 16,605,015 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02816,623,890 - 16,633,711 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02816,762,582 - 16,772,417 (+)NCBIUU_Cfam_GSD_1.0
Gsto1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721330,328,927 - 30,339,488 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366001,930,695 - 1,943,422 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366001,932,152 - 1,943,342 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GSTO1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl14115,206,188 - 115,216,613 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.114115,206,434 - 115,216,624 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.214125,175,630 - 125,185,821 (+)NCBISscrofa10.2Sscrofa10.2susScr3
GSTO1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1997,305,094 - 97,317,892 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366604858,424,657 - 58,438,025 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Gsto1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248313,342,584 - 3,352,467 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248313,342,539 - 3,351,766 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Gsto1
77 total Variants

Predicted Target Of
Summary Value
Count of predictions:35
Count of miRNA genes:33
Interacting mature miRNAs:35
Transcripts:ENSRNOT00000016851
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 47 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1354580Scort1Serum corticosterone level QTL 13.4blood corticosterone amount (VT:0005345)blood corticosterone level (CMO:0001172)1156677124256448636Rat
634313Niddm43Non-insulin dependent diabetes mellitus QTL 43blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)1199050459259647894Rat
1549910Bw54Body weight QTL 540.05body mass (VT:0001259)body weight (CMO:0000012)1214647894259647894Rat
1578778Pur4Proteinuria QTL 43.30.003urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)1150700247252085048Rat
1354646Kidm18Kidney mass QTL 185.7kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1151162512256448636Rat
70211Niddm24Non-insulin dependent diabetes mellitus QTL 243.79blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1214647894259647894Rat
1357399Bw45Body weight QTL 453.05body mass (VT:0001259)body mass index (BMI) (CMO:0000105)1206329708251329708Rat
724552Glom2Glomerulus QTL 23.30.0001kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli directly contacting the kidney surface (CMO:0001001)1222363780260522016Rat
631690Scl5Serum cholesterol level QTL 52.1blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)1236125214260522016Rat
1354652Kidm20Kidney mass QTL 204.3kidney mass (VT:0002707)calculated kidney weight (CMO:0000160)1177227632256448636Rat

1 to 10 of 47 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000016851   ⟹   ENSRNOP00000016851
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1246,721,298 - 246,731,468 (+)Ensembl
Rnor_6.0 Ensembl1267,607,437 - 267,617,387 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000076367   ⟹   ENSRNOP00000067943
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1267,607,418 - 267,617,367 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000077011
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1246,721,221 - 246,722,689 (+)Ensembl
Rnor_6.0 Ensembl1267,607,483 - 267,608,950 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000097867   ⟹   ENSRNOP00000095479
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1246,721,255 - 246,731,468 (+)Ensembl
RefSeq Acc Id: NM_001007602   ⟹   NP_001007603
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81256,662,531 - 256,672,515 (+)NCBI
mRatBN7.21246,721,243 - 246,731,228 (+)NCBI
Rnor_6.01267,607,437 - 267,617,387 (+)NCBI
Rnor_5.01275,040,049 - 275,050,033 (+)NCBI
RGSC_v3.41253,228,547 - 253,238,531 (+)RGD
Celera1242,486,178 - 242,496,113 (+)RGD
Sequence:
RefSeq Acc Id: XM_039108850   ⟹   XP_038964778
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81256,662,377 - 256,672,515 (+)NCBI
mRatBN7.21246,721,089 - 246,731,221 (+)NCBI
Protein RefSeqs NP_001007603 (Get FASTA)   NCBI Sequence Viewer  
  XP_038964778 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH79363 (Get FASTA)   NCBI Sequence Viewer  
  ACI32122 (Get FASTA)   NCBI Sequence Viewer  
  EDL94392 (Get FASTA)   NCBI Sequence Viewer  
  EDL94393 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000107772
GenBank Protein Q9Z339 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_001007603   ⟸   NM_001007602
- UniProtKB: Q9Z339 (UniProtKB/Swiss-Prot),   Q6AXR6 (UniProtKB/TrEMBL),   A6JHR8 (UniProtKB/TrEMBL),   B6DYQ5 (UniProtKB/TrEMBL),   F7F9Z0 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000016851   ⟸   ENSRNOT00000016851
Ensembl Acc Id: ENSRNOP00000067943   ⟸   ENSRNOT00000076367
RefSeq Acc Id: XP_038964778   ⟸   XM_039108850
- Peptide Label: isoform X1
Ensembl Acc Id: ENSRNOP00000095479   ⟸   ENSRNOT00000097867
GST C-terminal   GST N-terminal

Name Modeler Protein Id AA Range Protein Structure
AF-Q9Z339-F1-model_v2 AlphaFold Q9Z339 1-241 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13690981
Promoter ID:EPDNEW_R1506
Type:initiation region
Name:Gsto1_1
Description:glutathione S-transferase omega 1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01267,607,462 - 267,607,522EPDNEW


1 to 38 of 38 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-55463 BioCyc
Ensembl Genes ENSRNOG00000028746 Ensembl
  ENSRNOG00000071889 ENTREZGENE
Ensembl Transcript ENSRNOT00000128454 ENTREZGENE
Gene3D-CATH 1.20.1050.10 UniProtKB/Swiss-Prot
  Glutaredoxin UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7109248 IMAGE-MGC_LOAD
InterPro Glutathione-S-Trfase_C-like UniProtKB/Swiss-Prot
  Glutathione-S-Trfase_C_sf UniProtKB/Swiss-Prot
  Glutathione_S-Trfase_N UniProtKB/Swiss-Prot
  GST_C UniProtKB/Swiss-Prot
  GST_omega UniProtKB/Swiss-Prot
  GST_Omega/HSP26 UniProtKB/Swiss-Prot
  Omega/Tau-like UniProtKB/Swiss-Prot
  Thioredoxin-like_sf UniProtKB/Swiss-Prot
MGC_CLONE MGC:94845 IMAGE-MGC_LOAD
NCBI Gene 114846 ENTREZGENE
PANTHER GLUTATHIONE S-TRANSFERASE OMEGA-1 UniProtKB/Swiss-Prot
  PTHR43968 UniProtKB/Swiss-Prot
Pfam GST_C UniProtKB/Swiss-Prot
  GST_N_2 UniProtKB/Swiss-Prot
PhenoGen Gsto1 PhenoGen
PRINTS GSTRNSFRASEO UniProtKB/Swiss-Prot
PROSITE GST_CTER UniProtKB/Swiss-Prot
  GST_NTER UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000028746 RatGTEx
  ENSRNOG00000071889 RatGTEx
Superfamily-SCOP SSF47616 UniProtKB/Swiss-Prot
  SSF52833 UniProtKB/Swiss-Prot
UniProt A0A8I5ZZS8_RAT UniProtKB/TrEMBL
  A0A8I6B2N7_RAT UniProtKB/TrEMBL
  A6JHR8 ENTREZGENE, UniProtKB/TrEMBL
  A6JHR9_RAT UniProtKB/TrEMBL
  B6DYQ5 ENTREZGENE, UniProtKB/TrEMBL
  F7F9Z0 ENTREZGENE, UniProtKB/TrEMBL
  GSTO1_RAT UniProtKB/Swiss-Prot
  Q6AXR6 ENTREZGENE
  Q9Z339 ENTREZGENE
1 to 38 of 38 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2002-07-09 Gsto1  glutathione S-transferase omega 1      Symbol and Name updated to reflect Human and Mouse nomenclature 70877 APPROVED

Note Type Note Reference
gene_expression expression is decreased 1.5 fold in SHR compared with WKY rats 1357414
gene_protein 213 amino acids with a molecular weight of 24,929 70644