Akr1a1 (aldo-keto reductase family 1 member A1) - Rat Genome Database

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Gene: Akr1a1 (aldo-keto reductase family 1 member A1) Rattus norvegicus
Analyze
Symbol: Akr1a1
Name: aldo-keto reductase family 1 member A1
RGD ID: 68346
Description: Enables L-glucuronate reductase activity and glucuronolactone reductase activity. Involved in carboxylic acid metabolic process; cellular detoxification of aldehyde; and negative regulation of apoptotic process. Predicted to be located in apical plasma membrane. Predicted to be active in cytosol and synapse. Orthologous to human AKR1A1 (aldo-keto reductase family 1 member A1); PARTICIPATES IN doxorubicin pharmacokinetics pathway; prostaglandin biosynthetic pathway; gluconeogenesis pathway; INTERACTS WITH 2,2,2-tetramine; 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 3-DG-reducing enzyme; Akr1a4; alcohol dehydrogenase; alcohol dehydrogenase [NADP(+)]; alcohol dehydrogenase [NADP+]; aldehyde reductase; aldo-keto reductase family 1 member A1 (aldehyde reductase); aldo-keto reductase family 1, member A1; aldo-keto reductase family 1, member A1 (aldehyde reductase); glucuronate reductase; glucuronolactone reductase; S-nitroso-CoA reductase; scorR
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85135,329,605 - 135,367,037 (-)NCBIGRCr8
mRatBN7.25130,092,945 - 130,130,277 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5130,092,732 - 130,113,674 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5132,717,057 - 132,734,057 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05134,471,650 - 134,488,650 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05134,494,047 - 134,511,049 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05135,482,068 - 135,498,693 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5135,482,068 - 135,498,822 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05139,278,242 - 139,294,867 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45136,920,561 - 136,937,422 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15136,925,785 - 136,942,923 (-)NCBI
Celera5128,620,481 - 128,637,092 (-)NCBICelera
Cytogenetic Map5q35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
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Reference
Notes
Source
Original Reference(s)
Akr1a1Ratbreast cancer  ISOAKR1A1 (Homo sapiens)27226689mRNA:increased expression:breastRGD 
Akr1a1RatChemical and Drug Induced Liver Injury  ISOAkr1a1 (Mus musculus)27226688 RGD 
Akr1a1RatKidney Reperfusion Injury  ISOAkr1a1 (Mus musculus)27226686 RGD 
Akr1a1Ratlung adenocarcinoma disease_progressionISOAKR1A1 (Homo sapiens)27226687 RGD 
Object Symbol
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Term
Qualifier
Evidence
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Reference
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Original Reference(s)
Akr1a1RatCharcot-Marie-Tooth disease dominant intermediate C  ISOAKR1A1 (Homo sapiens)8554872ClinVar Annotator: match by term: Charcot-Marie-Tooth disease dominant intermediate CClinVarPMID:28492532
Akr1a1Ratdevelopmental and epileptic encephalopathy  ISOAKR1A1 (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathyClinVarPMID:28492532
Akr1a1Ratearly infantile epileptic encephalopathy  ISOAKR1A1 (Homo sapiens)8554872ClinVar Annotator: match by term: Early infantile epileptic encephalopathyClinVarPMID:28492532
Object Symbol
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Term
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Reference
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Original Reference(s)
Akr1a1Ratautism spectrum disorder  ISOAKR1A1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:35663546
Akr1a1RatCarcinogenesis  ISOAKR1A1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:32805337
Akr1a1RatChemical and Drug Induced Liver Injury  ISOAKR1A1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:32805337
Akr1a1Rathepatocellular carcinoma  ISOAKR1A1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:32805337
Akr1a1Ratperinatal necrotizing enterocolitis  ISOAKR1A1 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:18806098

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Original Reference(s)
Akr1a1Rat(1->4)-beta-D-glucan multiple interactionsISOAkr1a1 (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of AKR1A1 mRNACTDPMID:36331819
Akr1a1Rat(S)-nicotine multiple interactionsISOAkr1a1 (Mus musculus)6480464[Nicotine co-treated with 1-Methyl-4-phenyl-1 more ...CTDPMID:20230807
Akr1a1Rat1,2-dimethylhydrazine multiple interactionsISOAkr1a1 (Mus musculus)6480464Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of AKR1A1 mRNA]CTDPMID:22206623
Akr1a1Rat1,2-dimethylhydrazine increases expressionISOAkr1a1 (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of AKR1A1 mRNACTDPMID:22206623
Akr1a1Rat1,2-naphthoquinone increases reductionISOAKR1A1 (Homo sapiens)6480464AKR1A1 protein results in increased reduction of 1 and 2-naphthoquinoneCTDPMID:10510318
Akr1a1Rat1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine increases expressionISOAkr1a1 (Mus musculus)64804641-Methyl-4-phenyl-1 more ...CTDPMID:20230807
Akr1a1Rat1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine multiple interactionsISOAkr1a1 (Mus musculus)6480464[Caffeine co-treated with 1-Methyl-4-phenyl-1 more ...CTDPMID:20230807
Akr1a1Rat13-dihydrodaunorubicin multiple interactionsISOAKR1A1 (Homo sapiens)6480464[AKR1A1 results in increased metabolism of Daunorubicin] which results in increased chemical synthesis of daunorubicinolCTDPMID:18276838
Akr1a1Rat16-Ketoestrone increases reductionISOAKR1A1 (Homo sapiens)6480464AKR1A1 protein results in increased reduction of 16-ketoestroneCTDPMID:10510318
Akr1a1Rat17alpha-ethynylestradiol increases expressionISOAkr1a1 (Mus musculus)6480464Ethinyl Estradiol results in increased expression of AKR1A1 mRNACTDPMID:17942748
Akr1a1Rat17beta-hydroxy-17-methylestra-4,9,11-trien-3-one increases expressionISOAKR1A1 (Homo sapiens)6480464Metribolone results in increased expression of AKR1A1 proteinCTDPMID:17152098
Akr1a1Rat1H-pyrazole multiple interactionsISOAkr1a1 (Mus musculus)6480464pyrazole inhibits the reaction [AKR1A1 protein results in increased reduction of muconaldehyde]CTDPMID:16289176
Akr1a1Rat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISOAKR1A1 (Homo sapiens)64804642 more ...CTDPMID:31675489
Akr1a1Rat2,2,2-tetramine multiple interactionsEXP 6480464Trientine inhibits the reaction [Streptozocin results in increased expression of AKR1A1 protein]CTDPMID:19634143
Akr1a1Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOAkr1a1 (Mus musculus)6480464[Tetrachlorodibenzodioxin binds to AHR protein] which results in increased expression of AKR1A1 mRNACTDPMID:16214954
Akr1a1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of AKR1A1 mRNACTDPMID:33387578
Akr1a1Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of AKR1A1 mRNACTDPMID:32109520
Akr1a1Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionISOAkr1a1 (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of AKR1A1 mRNACTDPMID:21570461
Akr1a1Rat2,3,7,8-tetrachlorodibenzodioxine increases expressionISOAkr1a1 (Mus musculus)6480464Tetrachlorodibenzodioxin results in increased expression of AKR1A1 mRNACTDPMID:18796159
Akr1a1Rat2,4,6-trinitrotoluene affects expressionEXP 6480464Trinitrotoluene affects the expression of AKR1A1 mRNACTDPMID:21346803

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Biological Process
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Original Reference(s)
Akr1a1Rataldehyde catabolic process involved_inIEAInterPro:IPR0444811600115GO_REF:0000002InterProGO_REF:0000002
Akr1a1Rataldehyde catabolic process acts_upstream_of_or_withinISOAkr1a1 (Mus musculus)1624291 PMID:15769935RGDPMID:15769935
Akr1a1Rataldehyde catabolic process acts_upstream_of_or_withinIEAUniProtKB:Q9JII6 and ensembl:ENSMUSP000000304551600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1Ratcellular detoxification of aldehyde involved_inIDA 13838799PMID:25152401UniProt 
Akr1a1Ratcellular detoxification of aldehyde involved_inISOAkr1a1 (Mus musculus)1624291 PMID:22820017RGDPMID:22820017
Akr1a1Ratcellular detoxification of aldehyde involved_inIEAUniProtKB:Q9JII6 and ensembl:ENSMUSP000000304551600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1RatD-glucuronate catabolic process involved_inIMP 13825440PMID:22820017UniProt 
Akr1a1RatD-glucuronate catabolic process acts_upstream_of_or_withinIEAUniProtKB:Q9JII6 and ensembl:ENSMUSP000000304551600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1RatD-glucuronate catabolic process acts_upstream_of_or_withinISOAkr1a1 (Mus musculus)1624291 PMID:15769935RGDPMID:15769935
Akr1a1RatD-glucuronate catabolic process to D-xylulose 5-phosphate involved_inIEAUniProtKB:Q9JII6 and ensembl:ENSMUSP000000304551600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1RatD-glucuronate catabolic process to D-xylulose 5-phosphate involved_inISOAkr1a1 (Mus musculus)1624291 PMID:38160RGDPMID:38160
Akr1a1Ratdaunorubicin metabolic process involved_inISOAKR1A1 (Homo sapiens)1624291 PMID:18276838RGDPMID:18276838
Akr1a1Ratdaunorubicin metabolic process involved_inIEAUniProtKB:P14550 and ensembl:ENSP000003126061600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1Ratdoxorubicin metabolic process involved_inISOAKR1A1 (Homo sapiens)1624291 PMID:18276838RGDPMID:18276838
Akr1a1Ratdoxorubicin metabolic process involved_inIEAUniProtKB:P14550 and ensembl:ENSP000003126061600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1RatL-ascorbic acid biosynthetic process involved_inIMP 13825440PMID:22820017UniProt 
Akr1a1RatL-ascorbic acid biosynthetic process acts_upstream_of_or_withinIEAUniProtKB:Q9JII6 and ensembl:ENSMUSP000000304551600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1RatL-ascorbic acid biosynthetic process acts_upstream_of_or_withinISOAkr1a1 (Mus musculus)1624291 PMID:15769935RGDPMID:15769935
Akr1a1RatL-ascorbic acid biosynthetic process involved_inISOAkr1a1 (Mus musculus)1624291MGI:4239556 PMID:20410296RGDPMID:20410296
Akr1a1Ratlipid metabolic process involved_inIEAUniProtKB-KW:KW-04431600115GO_REF:0000043UniProtGO_REF:0000043
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Cellular Component
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Original Reference(s)
Akr1a1Ratapical plasma membrane part_ofISSUniProtKB:Q9JII61600115GO_REF:0000024UniProtGO_REF:0000024
Akr1a1Ratapical plasma membrane located_inIEAUniProtKB:Q9JII6 and ensembl:ENSMUSP000000304551600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1Ratapical plasma membrane located_inISOAkr1a1 (Mus musculus)1624291 PMID:15769935RGDPMID:15769935
Akr1a1Ratapical plasma membrane located_inIEAUniProtKB-SubCell:SL-00151600115GO_REF:0000044UniProtGO_REF:0000044
Akr1a1Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Akr1a1Ratcytosol is_active_inISOAkr1a1 (Mus musculus)1624291 PMID:15769935 and PMID:38160RGDPMID:15769935 and PMID:38160
Akr1a1Ratcytosol located_inISOAkr1a1 (Mus musculus)1624291 PMID:15769935RGDPMID:15769935
Akr1a1Ratcytosol is_active_inIBAMGI:1353494 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Akr1a1Ratcytosol part_ofISSUniProtKB:Q9JII61600115GO_REF:0000024UniProtGO_REF:0000024
Akr1a1Ratcytosol located_inIEAUniProtKB-SubCell:SL-00911600115GO_REF:0000044UniProtGO_REF:0000044
Akr1a1Ratcytosol located_inIEAUniProtKB:Q9JII6 and ensembl:ENSMUSP000000304551600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Akr1a1Ratplasma membrane located_inIEAUniProtKB-KW:KW-10031600115GO_REF:0000043UniProtGO_REF:0000043
Akr1a1Ratsynapse is_active_inISOAkr1a1 (Mus musculus)1624291 PMID:16635246RGDPMID:16635246
Akr1a1Ratsynapse is_active_inIEAUniProtKB:Q9JII6 and ensembl:ENSMUSP000000304551600115GO_REF:0000107EnsemblGO_REF:0000107
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Molecular Function
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Original Reference(s)
Akr1a1Ratalcohol dehydrogenase (NADP+) activity enablesIEAInterPro:IPR0444811600115GO_REF:0000002InterProGO_REF:0000002
Akr1a1Ratalcohol dehydrogenase (NADP+) activity enablesIEARHEA:159371600115GO_REF:0000116RHEAGO_REF:0000116
Akr1a1Ratalcohol dehydrogenase (NADP+) activity enablesIEAEC:1.1.1.21600115GO_REF:0000003UniProtGO_REF:0000003
Akr1a1Rataldose reductase (NADPH) activity enablesIEAUniProtKB:Q9JII6 and ensembl:ENSMUSP000000304551600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1Rataldose reductase (NADPH) activity enablesISOAkr1a1 (Mus musculus)1624291 PMID:14667815 and PMID:15769935RGDPMID:14667815 and PMID:15769935
Akr1a1Rataldose reductase (NADPH) activity enablesIBAFB:FBgn0086254 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Akr1a1Ratall-trans-retinol dehydrogenase (NAD+) activity NOT|enablesISSUniProtKB:P505781600115GO_REF:0000024UniProtGO_REF:0000024
Akr1a1Ratall-trans-retinol dehydrogenase (NAD+) activity NOT|enablesISOAKR1A1 (Sus scrofa)1624291 PMID:12732097RGDPMID:12732097
Akr1a1Ratallyl-alcohol dehydrogenase activity enablesIEARHEA:121681600115GO_REF:0000116RHEAGO_REF:0000116
Akr1a1Ratallyl-alcohol dehydrogenase activity enablesIEAEC:1.1.1.541600115GO_REF:0000003UniProtGO_REF:0000003
Akr1a1Ratglucuronolactone reductase activity enablesISOAkr1a1 (Mus musculus)1624291 PMID:22820017RGDPMID:22820017
Akr1a1Ratglucuronolactone reductase activity enablesIEAEC:1.1.1.201600115GO_REF:0000003UniProtGO_REF:0000003
Akr1a1Ratglucuronolactone reductase activity enablesIEAUniProtKB:P14550 and ensembl:ENSP000003126061600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1Ratglucuronolactone reductase activity enablesIEAUniProtKB:Q9JII6 and ensembl:ENSMUSP000000304551600115GO_REF:0000107EnsemblGO_REF:0000107
Akr1a1Ratglucuronolactone reductase activity enablesIEARHEA:189251600115GO_REF:0000116RHEAGO_REF:0000116
Akr1a1Ratglucuronolactone reductase activity enablesISOAKR1A1 (Homo sapiens)1624291 PMID:10510318RGDPMID:10510318
Akr1a1Ratglucuronolactone reductase activity enablesIDA 13825440PMID:22820017UniProt 
Akr1a1Ratglycerol dehydrogenase (NADP+) activity enablesIEARHEA:235921600115GO_REF:0000116RHEAGO_REF:0000116
Akr1a1RatL-glucuronate reductase activity enablesIDA 13825440PMID:22820017UniProt 
Akr1a1RatL-glucuronate reductase activity enablesIEARHEA:149091600115GO_REF:0000116RHEAGO_REF:0000116
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RGD Manual Annotations


  

Imported Annotations - SMPDB

Object Symbol
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Original Reference(s)
Akr1a1Ratdoxorubicin pharmacokinetics pathway   ISOAKR1A1 (Homo sapiens)10402751 SMPDBSMP:00650

Imported Annotations - KEGG (archival)

Object Symbol
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Reference
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Original Reference(s)
Akr1a1Ratgluconeogenesis pathway   IEA 6907045 KEGGrno:00010
Akr1a1Ratglycerolipid metabolic pathway  IEA 6907045 KEGGrno:00561
Akr1a1Ratglycolysis pathway   IEA 6907045 KEGGrno:00010
Akr1a1Ratglycolysis/gluconeogenesis pathway  IEA 6907045 KEGGrno:00010

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#
Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. The role of cytochromes p450 and aldo-keto reductases in prognosis of breast carcinoma patients. Hlaváč V, etal., Medicine (Baltimore). 2014 Dec;93(28):e255. doi: 10.1097/MD.0000000000000255.
3. Mice deficient in aldo-keto reductase 1a (Akr1a) are resistant to thioacetamide-induced liver injury. Homma T, etal., Toxicol Lett. 2018 Sep 15;294:37-43. doi: 10.1016/j.toxlet.2018.05.015. Epub 2018 May 12.
4. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
5. Reductive detoxification of acrolein as a potential role for aldehyde reductase (AKR1A) in mammals. Kurahashi T, etal., Biochem Biophys Res Commun. 2014 Sep 12;452(1):136-41. doi: 10.1016/j.bbrc.2014.08.072. Epub 2014 Aug 21.
6. Evaluation of the prostaglandin F synthase activity of human and bovine aldo-keto reductases: AKR1A1s complement AKR1B1s as potent PGF synthases. Lacroix Pepin N, etal., Prostaglandins Other Lipid Mediat. 2013 Oct;106:124-32. doi: 10.1016/j.prostaglandins.2013.05.005. Epub 2013 Jun 6.
7. Identification of a novel glycolysis-related gene signature that can predict the survival of patients with lung adenocarcinoma. Liu C, etal., Cell Cycle. 2019 Mar;18(5):568-579. doi: 10.1080/15384101.2019.1578146. Epub 2019 Feb 17.
8. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
9. New developments in anthracycline-induced cardiotoxicity. Mordente A, etal., Curr Med Chem. 2009;16(13):1656-72.
10. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
11. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
12. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
13. GOA pipeline RGD automated data pipeline
14. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
15. Comprehensive gene review and curation RGD comprehensive gene curation
16. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
17. Overexpression of aldehyde reductase protects PC12 cells from the cytotoxicity of methylglyoxal or 3-deoxyglucosone. Suzuki K, etal., J Biochem. 1998 Feb;123(2):353-7.
18. In vivo role of aldehyde reductase. Takahashi M, etal., Biochim Biophys Acta. 2012 Nov;1820(11):1787-96. doi: 10.1016/j.bbagen.2012.07.003. Epub 2012 Jul 20.
19. Identity of a major 3-deoxyglucosone-reducing enzyme with aldehyde reductase in rat liver established by amino acid sequencing and cDNA expression. Takahashi M, etal., Gene 1993 May 30;127(2):249-53.
20. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
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PMID:7669785   PMID:10510318   PMID:12732097   PMID:14667815   PMID:15489334   PMID:15769935   PMID:16635246   PMID:18276838   PMID:19056867   PMID:19199708   PMID:20410296   PMID:20458337  
PMID:23376485   PMID:23533145   PMID:23580065  



Akr1a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr85135,329,605 - 135,367,037 (-)NCBIGRCr8
mRatBN7.25130,092,945 - 130,130,277 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl5130,092,732 - 130,113,674 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx5132,717,057 - 132,734,057 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.05134,471,650 - 134,488,650 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.05134,494,047 - 134,511,049 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.05135,482,068 - 135,498,693 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl5135,482,068 - 135,498,822 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.05139,278,242 - 139,294,867 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45136,920,561 - 136,937,422 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.15136,925,785 - 136,942,923 (-)NCBI
Celera5128,620,481 - 128,637,092 (-)NCBICelera
Cytogenetic Map5q35NCBI
AKR1A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38145,550,826 - 45,570,049 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl145,550,543 - 45,570,049 (+)EnsemblGRCh38hg38GRCh38
GRCh37146,016,498 - 46,035,721 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36145,789,085 - 45,808,308 (+)NCBINCBI36Build 36hg18NCBI36
Build 34145,685,590 - 45,704,813NCBI
Celera144,300,464 - 44,319,706 (+)NCBICelera
Cytogenetic Map1p34.1NCBI
HuRef144,127,818 - 44,147,063 (+)NCBIHuRef
CHM1_1146,133,579 - 46,152,870 (+)NCBICHM1_1
T2T-CHM13v2.0145,423,192 - 45,442,415 (+)NCBIT2T-CHM13v2.0
Akr1a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394116,493,707 - 116,508,871 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl4116,493,707 - 116,508,877 (-)EnsemblGRCm39 Ensembl
GRCm384116,636,510 - 116,651,674 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4116,636,510 - 116,651,680 (-)EnsemblGRCm38mm10GRCm38
MGSCv374116,309,115 - 116,324,256 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv364116,134,442 - 116,149,583 (-)NCBIMGSCv36mm8
Celera4115,370,207 - 115,385,626 (-)NCBICelera
Cytogenetic Map4D1NCBI
cM Map453.26NCBI
Akr1a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546412,714,717 - 12,729,662 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546412,715,238 - 12,729,034 (-)NCBIChiLan1.0ChiLan1.0
AKR1A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21181,239,683 - 181,257,580 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11180,381,197 - 180,399,087 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0144,853,867 - 44,871,764 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1146,211,859 - 46,230,072 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl146,211,859 - 46,230,072 (+)Ensemblpanpan1.1panPan2
AKR1A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11514,792,398 - 14,808,805 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1514,742,012 - 14,808,592 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1514,913,465 - 14,929,729 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01514,947,192 - 14,963,694 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1514,896,489 - 14,963,353 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11514,744,329 - 14,760,787 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01514,814,053 - 14,828,473 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01514,884,045 - 14,900,543 (-)NCBIUU_Cfam_GSD_1.0
Akr1a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505860,855,920 - 60,872,212 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647426,680,676 - 26,697,214 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647426,680,736 - 26,696,996 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
AKR1A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl6165,811,247 - 165,824,896 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.16165,811,245 - 165,825,168 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
AKR1A1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12087,228,348 - 87,245,511 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2087,228,189 - 87,245,466 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603329,719,096 - 29,738,521 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Akr1a1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249061,462,693 - 1,474,214 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249061,463,201 - 1,474,001 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

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Variants in Akr1a1
268 total Variants

Predicted Target Of
Summary Value
Count of predictions:81
Count of miRNA genes:69
Interacting mature miRNAs:72
Transcripts:ENSRNOT00000023072
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 52 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1549845Scl44Serum cholesterol level QTL 446blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)540128307148607290Rat
8552960Pigfal15Plasma insulin-like growth factor 1 level QTL 15blood insulin-like growth factor amount (VT:0010479)plasma insulin-like growth factor 1 level (CMO:0001299)5111416838156416838Rat
1300122Wbc1White blood cell count QTL 12.75leukocyte quantity (VT:0000217)total white blood cell count (CMO:0000365)5125392826139989768Rat
61452Ciaa5CIA Autoantibody QTL 53.5blood autoantibody amount (VT:0003725)calculated serum anti-rat type 2 collagen autoantibody titer (CMO:0001281)594858972143070159Rat
70156Niddm30Non-insulin dependent diabetes mellitus QTL 303.98blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)5129132447151006154Rat
7411582Foco3Food consumption QTL 37.50.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)587468046132468046Rat
1302790Scl20Serum cholesterol level QTL 206.40.0001blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)582394392166664054Rat
1598861Cm64Cardiac mass QTL 642.9heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)5127798274166875058Rat
1578766Tcas11Tongue tumor susceptibility QTL 114.12tongue integrity trait (VT:0010553)number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950)546711509161317411Rat
1549838Bss4Bone structure and strength QTL 49.2femur strength trait (VT:0010010)femur midshaft polar moment of inertia (CMO:0001669)5106906205151906205Rat

1 to 10 of 52 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 30 of 39 rows
RefSeq Transcripts NM_031000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039110816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC120450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC059133 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH474008 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D10854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212586 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ212919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213097 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213467 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213579 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ213776 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ214783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ215772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ218721 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 39 rows

Ensembl Acc Id: ENSRNOT00000023072   ⟹   ENSRNOP00000023072
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5130,092,963 - 130,113,674 (-)Ensembl
Rnor_6.0 Ensembl5135,482,068 - 135,498,822 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101228   ⟹   ENSRNOP00000092196
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5130,092,732 - 130,097,916 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000114894   ⟹   ENSRNOP00000081527
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl5130,094,166 - 130,113,674 (-)Ensembl
RefSeq Acc Id: NM_031000   ⟹   NP_112262
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85135,329,606 - 135,346,231 (-)NCBI
mRatBN7.25130,092,946 - 130,109,575 (-)NCBI
Rnor_6.05135,482,068 - 135,498,693 (-)NCBI
Rnor_5.05139,278,242 - 139,294,867 (-)NCBI
RGSC_v3.45136,920,561 - 136,937,422 (-)RGD
Celera5128,620,481 - 128,637,092 (-)RGD
Sequence:
RefSeq Acc Id: XM_039110816   ⟹   XP_038966744
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr85135,329,605 - 135,367,037 (-)NCBI
mRatBN7.25130,092,945 - 130,130,277 (-)NCBI
1 to 9 of 9 rows
Protein RefSeqs NP_112262 (Get FASTA)   NCBI Sequence Viewer  
  XP_038966744 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH59133 (Get FASTA)   NCBI Sequence Viewer  
  BAA01627 (Get FASTA)   NCBI Sequence Viewer  
  EDL90265 (Get FASTA)   NCBI Sequence Viewer  
  EDL90266 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000023072
  ENSRNOP00000023072.3
GenBank Protein P51635 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: NP_112262   ⟸   NM_031000
- UniProtKB: P51635 (UniProtKB/Swiss-Prot),   A6JZ88 (UniProtKB/TrEMBL),   A0A8I6AVC9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000023072   ⟸   ENSRNOT00000023072
RefSeq Acc Id: XP_038966744   ⟸   XM_039110816
- Peptide Label: isoform X1
- UniProtKB: P51635 (UniProtKB/Swiss-Prot),   A6JZ88 (UniProtKB/TrEMBL),   A0A8I6AVC9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSRNOP00000081527   ⟸   ENSRNOT00000114894
Ensembl Acc Id: ENSRNOP00000092196   ⟸   ENSRNOT00000101228
Name Modeler Protein Id AA Range Protein Structure
AF-P51635-F1-model_v2 AlphaFold P51635 1-325 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13693937
Promoter ID:EPDNEW_R4462
Type:initiation region
Name:Akr1a1_1
Description:aldo-keto reductase family 1 member A1
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.05135,498,706 - 135,498,766EPDNEW


1 to 33 of 33 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-40245 BioCyc
BioCyc Pathway PWY-6307 [L-tryptophan degradation X (mammalian, via tryptamine)] BioCyc
BioCyc Pathway Image PWY-6307 BioCyc
Ensembl Genes ENSRNOG00000016727 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSRNOT00000023072 ENTREZGENE
  ENSRNOT00000023072.6 UniProtKB/Swiss-Prot
Gene3D-CATH 3.20.20.100 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:6918695 IMAGE-MGC_LOAD
InterPro AKR1A UniProtKB/Swiss-Prot
  Aldo/ket_reductase_CS UniProtKB/Swiss-Prot
  Aldo/keto_reductase UniProtKB/Swiss-Prot
  NADP_OxRdtase_dom UniProtKB/Swiss-Prot
  NADP_OxRdtase_dom_sf UniProtKB/Swiss-Prot
KEGG Report rno:78959 UniProtKB/Swiss-Prot
MGC_CLONE MGC:72802 IMAGE-MGC_LOAD
NCBI Gene 78959 ENTREZGENE
PANTHER ALDO/KETO REDUCTASE UniProtKB/Swiss-Prot
Pfam Aldo_ket_red UniProtKB/Swiss-Prot
PharmGKB AKR1A1 RGD
PhenoGen Akr1a1 PhenoGen
PIRSF AKR UniProtKB/Swiss-Prot
PRINTS ALDKETRDTASE UniProtKB/Swiss-Prot
PROSITE ALDOKETO_REDUCTASE_1 UniProtKB/Swiss-Prot
  ALDOKETO_REDUCTASE_2 UniProtKB/Swiss-Prot
  ALDOKETO_REDUCTASE_3 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000016727 RatGTEx
Superfamily-SCOP SSF51430 UniProtKB/Swiss-Prot
TIGR TC204008
UniProt A0A8I5ZT45_RAT UniProtKB/TrEMBL
  A0A8I6AVC9 ENTREZGENE, UniProtKB/TrEMBL
  A6JZ87_RAT UniProtKB/TrEMBL
  A6JZ88 ENTREZGENE, UniProtKB/TrEMBL
  AK1A1_RAT UniProtKB/Swiss-Prot, ENTREZGENE
1 to 33 of 33 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-06-08 Akr1a1  aldo-keto reductase family 1 member A1  Akr1a1  aldo-keto reductase family 1, member A1 (aldehyde reductase)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-18 Akr1a1  aldo-keto reductase family 1, member A1 (aldehyde reductase)  Akr1a1  aldo-keto reductase family 1, member A1  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-06-10 Akr1a1  aldo-keto reductase family 1, member A1      Name updated 70584 APPROVED

Note Type Note Reference
gene_function catalyzes the NADPH-dependent reduction of 3-deoxyglucosone (3-DG) 724707