Pik3r2 (phosphoinositide-3-kinase regulatory subunit 2) - Rat Genome Database

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Gene: Pik3r2 (phosphoinositide-3-kinase regulatory subunit 2) Rattus norvegicus
Analyze
Symbol: Pik3r2
Name: phosphoinositide-3-kinase regulatory subunit 2
RGD ID: 68341
Description: Predicted to enable several functions, including 1-phosphatidylinositol-3-kinase regulator activity; enzyme binding activity; and phosphatidylinositol 3-kinase regulatory subunit binding activity. Involved in negative regulation of cell migration involved in sprouting angiogenesis. Predicted to be located in focal adhesion and nucleus. Predicted to be part of phosphatidylinositol 3-kinase complex, class IA. Biomarker of hepatocellular carcinoma. Human ortholog(s) of this gene implicated in pancreatic ductal adenocarcinoma. Orthologous to human PIK3R2 (phosphoinositide-3-kinase regulatory subunit 2); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FasL mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; INTERACTS WITH 2,6-dinitrotoluene; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: MGC108697; phosphatidylinositol 3-kinase 85 kDa regulatory subunit beta; phosphatidylinositol 3-kinase regulartory subunit polypeptide 2; phosphatidylinositol 3-kinase regulatory subunit beta; phosphatidylinositol 3-kinase regulatory subunit polypeptide 2 (p85 beta); phosphatidylinositol 3-kinase, regulartory subunit, polypeptide 2; phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2; phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta); phosphoinositide-3-kinase, regulatory subunit 2 (beta); PI3-kinase p85 subunit beta; PI3-kinase regulatory subunit beta; PI3-kinase subunit p85-beta; PI3K regulatory subunit beta; ptdIns-3-kinase p85-beta; ptdIns-3-kinase regulatory subunit beta; ptdIns-3-kinase regulatory subunit p85-beta
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81618,699,389 - 18,708,045 (+)NCBIGRCr8
mRatBN7.21618,665,517 - 18,674,067 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1618,665,457 - 18,674,065 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1618,707,923 - 18,716,460 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01619,840,602 - 19,849,140 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01618,760,867 - 18,769,404 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01620,415,109 - 20,424,982 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1620,416,432 - 20,424,980 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01620,273,500 - 20,282,051 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,171,101 - 19,179,650 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11619,171,098 - 19,179,648 (+)NCBI
Celera1618,857,756 - 18,866,282 (+)NCBICelera
Cytogenetic Map16p14NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
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Original Reference(s)
Pik3r2Ratcolon cancer  ISOPIK3R2 (Homo sapiens)13432043 RGD 
Pik3r2RatColonic Neoplasms  ISOPik3r2 (Mus musculus)13432042 RGD 
Pik3r2Rathepatocellular carcinoma treatmentIEP 152177911 RGD 
Pik3r2Ratpancreatic ductal adenocarcinoma severityISOPIK3R2 (Homo sapiens)14390084human cells in a mouse modelRGD 
Pik3r2Ratprostate cancer  ISOPIK3R2 (Homo sapiens)11561757 RGD 
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Pik3r2RatDevelopmental Disabilities  ISOPIK3R2 (Homo sapiens)8554872ClinVar Annotator: match by term: Global developmental delayClinVarPMID:25741868
Pik3r2Ratepilepsy  ISOPIK3R2 (Homo sapiens)8554872ClinVar Annotator: match by term: SeizureClinVarPMID:16357568 more ...
Pik3r2Ratgenetic disease  ISOPIK3R2 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVarPMID:16357568 more ...
Pik3r2Ratintellectual disability  ISOPIK3R2 (Homo sapiens)8554872ClinVar Annotator: match by term: intellectual disabilitiesClinVarPMID:16357568 more ...
Pik3r2RatMegalencephaly - Cutis Marmorata Telangiectatica Congenita  ISOPIK3R2 (Homo sapiens)8554872ClinVar Annotator: match by term: Macrocephaly cutis marmorata telangiectatica congenitaClinVarPMID:16357568 more ...
Pik3r2RatMegalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome  ISOPIK3R2 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:16357568 more ...
Pik3r2RatMegalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome 1  ISOPIK3R2 (Homo sapiens)8554872ClinVar more ...ClinVarPMID:16357568 more ...
Pik3r2Ratmultiple myeloma  ISOPIK3R2 (Homo sapiens)8554872ClinVar Annotator: match by term: Multiple myelomaClinVar 
Pik3r2RatSmith-Kingsmore Syndrome  ISOPIK3R2 (Homo sapiens)8554872ClinVar Annotator: match by term: Overgrowth syndromeClinVarPMID:25741868
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Pik3r2RatMegalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome  ISOPIK3R2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:22729224
Pik3r2RatProstatic Neoplasms  ISOPIK3R2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:29610475
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Original Reference(s)
Pik3r2RatMegalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome 1  ISOPIK3R2 (Homo sapiens)7240710 OMIM 

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Original Reference(s)
Pik3r2Rat(-)-demecolcine decreases expressionISOPIK3R2 (Homo sapiens)6480464Demecolcine results in decreased expression of PIK3R2 mRNACTDPMID:23649840
Pik3r2Rat1,2-dimethylhydrazine decreases expressionISOPik3r2 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of PIK3R2 mRNACTDPMID:22206623
Pik3r2Rat1,2-dimethylhydrazine multiple interactionsISOPik3r2 (Mus musculus)6480464[1 and 2-Dimethylhydrazine co-treated with Folic Acid] results in decreased expression of PIK3R2 mRNACTDPMID:22206623
Pik3r2Rat17beta-estradiol decreases expressionISOPIK3R2 (Homo sapiens)6480464Estradiol results in decreased expression of PIK3R2 mRNACTDPMID:16705744 and PMID:23373633
Pik3r2Rat17beta-estradiol increases expressionISOPik3r2 (Mus musculus)6480464Estradiol results in increased expression of PIK3R2 mRNACTDPMID:39298647
Pik3r2Rat2,2',4,4'-Tetrabromodiphenyl ether decreases expressionISOPIK3R2 (Homo sapiens)64804642 more ...CTDPMID:31675489
Pik3r2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionISOPik3r2 (Mus musculus)6480464Tetrachlorodibenzodioxin results in decreased expression of PIK3R2 mRNACTDPMID:19465110
Pik3r2Rat2,4,6-tribromophenol decreases expressionISOPIK3R2 (Homo sapiens)64804642 more ...CTDPMID:31675489
Pik3r2Rat2,6-dinitrotoluene affects expressionEXP 64804642 and 6-dinitrotoluene affects the expression of PIK3R2 mRNACTDPMID:21346803
Pik3r2Rat3,3',5,5'-tetrabromobisphenol A decreases expressionISOPIK3R2 (Homo sapiens)6480464tetrabromobisphenol A results in decreased expression of PIK3R2 proteinCTDPMID:31675489
Pik3r2Rat3,4-methylenedioxymethamphetamine increases expressionISOPik3r2 (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of PIK3R2 mRNACTDPMID:20188158
Pik3r2Rat4,4'-sulfonyldiphenol affects methylationISOPik3r2 (Mus musculus)6480464bisphenol S affects the methylation of PIK3R2 exon and bisphenol S affects the methylation of PIK3R2 geneCTDPMID:31683443 and PMID:33297965
Pik3r2Rat4-hydroxynon-2-enal decreases expressionISOPIK3R2 (Homo sapiens)64804644-hydroxy-2-nonenal results in decreased expression of PIK3R2 mRNACTDPMID:12419474
Pik3r2Ratacrolein multiple interactionsISOPIK3R2 (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of PIK3R2 mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased oxidation of PIK3R2 mRNACTDPMID:32699268
Pik3r2Ratacrylamide decreases expressionISOPIK3R2 (Homo sapiens)6480464Acrylamide results in decreased expression of PIK3R2 mRNACTDPMID:32763439
Pik3r2Ratacrylamide increases expressionISOPik3r2 (Mus musculus)6480464Acrylamide results in increased expression of PIK3R2 mRNACTDPMID:38152866
Pik3r2Rataflatoxin B1 decreases methylationISOPIK3R2 (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of PIK3R2 exonCTDPMID:30157460
Pik3r2RatAflatoxin B2 alpha increases methylationISOPIK3R2 (Homo sapiens)6480464aflatoxin B2 results in increased methylation of PIK3R2 intronCTDPMID:30157460
Pik3r2Ratalpha-pinene multiple interactionsISOPIK3R2 (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of PIK3R2 mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased oxidation of PIK3R2 mRNACTDPMID:32699268
Pik3r2Ratammonium chloride affects expressionEXP 6480464Ammonium Chloride affects the expression of PIK3R2 mRNACTDPMID:16483693

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Biological Process
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Original Reference(s)
Pik3r2Ratcellular response to insulin stimulus involved_inISOPik3r2 (Mus musculus)1624291 PMID:20348926RGDPMID:20348926
Pik3r2Ratcellular response to insulin stimulus involved_inIEAUniProtKB:O08908 and ensembl:ENSMUSP000000342961600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratcellular response to insulin stimulus involved_inISSUniProtKB:O089081600115GO_REF:0000024UniProtGO_REF:0000024
Pik3r2Ratinsulin receptor signaling pathway involved_inIBAFB:FBgn0020622 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pik3r2Ratinsulin receptor signaling pathway involved_inISOPik3r2 (Mus musculus)1624291 PMID:20348926RGDPMID:20348926
Pik3r2Ratinsulin receptor signaling pathway involved_inIEAUniProtKB:O08908 and ensembl:ENSMUSP000000342961600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratintracellular glucose homeostasis involved_inISOPik3r2 (Mus musculus)1624291 PMID:20348926RGDPMID:20348926
Pik3r2Ratintracellular glucose homeostasis involved_inIEAUniProtKB:O08908 and ensembl:ENSMUSP000000342961600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratintracellular glucose homeostasis involved_inISSUniProtKB:O089081600115GO_REF:0000024UniProtGO_REF:0000024
Pik3r2Ratnegative regulation of cell migration involved in sprouting angiogenesis involved_inIMP 11053232PMID:25652288BHF-UCL 
Pik3r2Ratnegative regulation of MAPK cascade involved_inISOPIK3R2 (Homo sapiens)1624291 PMID:18694566RGDPMID:18694566
Pik3r2Ratnegative regulation of MAPK cascade involved_inIEAUniProtKB:O00459 and ensembl:ENSP000002222541600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratphosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inISOPIK3R2 (Homo sapiens)1624291 PMID:23604317RGDPMID:23604317
Pik3r2Ratphosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inISSUniProtKB:O004591600115GO_REF:0000024UniProtGO_REF:0000024
Pik3r2Ratphosphatidylinositol 3-kinase/protein kinase B signal transduction involved_inIEAUniProtKB:O00459 and ensembl:ENSP000002222541600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratpositive regulation of cell adhesion acts_upstream_of_or_withinIEAUniProtKB:O08908 and ensembl:ENSMUSP000000342961600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratpositive regulation of cell adhesion acts_upstream_of_or_withinISOPik3r2 (Mus musculus)1624291 PMID:25217619RGDPMID:25217619
Pik3r2Ratpositive regulation of protein import into nucleus involved_inISSUniProtKB:O089081600115GO_REF:0000024UniProtGO_REF:0000024
Pik3r2Ratpositive regulation of protein import into nucleus involved_inISOPik3r2 (Mus musculus)1624291 PMID:20348926RGDPMID:20348926
Pik3r2Ratpositive regulation of protein import into nucleus involved_inIEAUniProtKB:O08908 and ensembl:ENSMUSP000000342961600115GO_REF:0000107EnsemblGO_REF:0000107
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Cellular Component
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Original Reference(s)
Pik3r2Ratcytosol located_inTAS 1600115Reactome:R-RNO-451755ReactomeReactome:R-RNO-451755
Pik3r2Ratfocal adhesion located_inIEAUniProtKB:O08908 and ensembl:ENSMUSP000000342961600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratfocal adhesion located_inISOPik3r2 (Mus musculus)1624291 PMID:25217619RGDPMID:25217619
Pik3r2Ratnucleus located_inIEAUniProtKB:O08908 and ensembl:ENSMUSP000000342961600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratnucleus located_inISSUniProtKB:O089081600115GO_REF:0000024UniProtGO_REF:0000024
Pik3r2Ratnucleus located_inISOPik3r2 (Mus musculus)1624291 PMID:20348926 and PMID:25217619RGDPMID:20348926 and PMID:25217619
Pik3r2Ratphosphatidylinositol 3-kinase complex, class IA part_ofISOPIK3R2 (Homo sapiens)1624291 PMID:22402981RGDPMID:22402981
Pik3r2Ratphosphatidylinositol 3-kinase complex, class IA part_ofIEAUniProtKB:O00459 and ensembl:ENSP000002222541600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratphosphatidylinositol 3-kinase complex, class IA part_ofIBAFB:FBgn0020622 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
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Molecular Function
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Original Reference(s)
Pik3r2Rat1-phosphatidylinositol-3-kinase regulator activity enablesIBAMGI:109277 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pik3r2Ratkinase activity enablesIEAUniProtKB-KW:KW-04181600115GO_REF:0000043UniProtGO_REF:0000043
Pik3r2Ratphosphatidylinositol 3-kinase regulatory subunit binding enablesIEAUniProtKB:O08908 and ensembl:ENSMUSP000000342961600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratphosphatidylinositol 3-kinase regulatory subunit binding enablesISOPik3r2 (Mus musculus)1624291UniProtKB:P26450 and PMID:20348926RGDPMID:20348926
Pik3r2Ratphosphotyrosine residue binding enablesISOPIK3R2 (Homo sapiens)1624291UniProtKB:Q6GX35 and PMID:20624904RGDPMID:20624904
Pik3r2Ratphosphotyrosine residue binding enablesIEAUniProtKB:O00459 and ensembl:ENSP000002222541600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratprotein binding enablesISOPIK3R2 (Homo sapiens)1624291UniProtKB:G5E9A7 more ...RGDPMID:16273093 more ...
Pik3r2Ratprotein binding enablesISOPik3r2 (Mus musculus)1624291PR:P34152 more ...RGDPMID:12052866 more ...
Pik3r2Ratprotein heterodimerization activity enablesIEAUniProtKB:O08908 and ensembl:ENSMUSP000000342961600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratprotein heterodimerization activity enablesISOPik3r2 (Mus musculus)1624291UniProtKB:P26450 and PMID:20348926RGDPMID:20348926
Pik3r2Ratprotein phosphatase binding enablesISOPIK3R2 (Homo sapiens)1624291UniProtKB:Q12923 and PMID:23604317RGDPMID:23604317
Pik3r2Ratprotein phosphatase binding enablesIEAUniProtKB:O00459 and ensembl:ENSP000002222541600115GO_REF:0000107EnsemblGO_REF:0000107
Pik3r2Ratreceptor tyrosine kinase binding enablesISOPIK3R2 (Homo sapiens)1624291UniProtKB:Q06418 and PMID:10627473RGDPMID:10627473
Pik3r2Ratreceptor tyrosine kinase binding enablesIEAUniProtKB:O00459 and ensembl:ENSP000002222541600115GO_REF:0000107EnsemblGO_REF:0000107
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RGD Manual Annotations


  
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Original Reference(s)
Pik3r2Ratphosphatidylinositol 3-kinase-Akt signaling pathway   ISOPIK3R2 (Homo sapiens)2290458 RGD 

Imported Annotations - KEGG (archival)

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Pik3r2Ratacute myeloid leukemia pathway  IEA 6907045 KEGGrno:05221
Pik3r2Rataldosterone signaling pathway   IEA 6907045 KEGGrno:04960
Pik3r2Ratapoptotic cell death pathway  IEA 6907045 KEGGrno:04210
Pik3r2RatB cell receptor signaling pathway  IEA 6907045 KEGGrno:04662
Pik3r2Ratceramide signaling pathway  IEA 6907045 KEGGrno:05212
Pik3r2RatChagas disease pathway  IEA 6907045 KEGGrno:05142
Pik3r2Ratchemokine mediated signaling pathway  IEA 6907045 KEGGrno:04062
Pik3r2Ratchronic myeloid leukemia pathway  IEA 6907045 KEGGrno:05220
Pik3r2Ratcolorectal cancer pathway   IEA 6907045 KEGGrno:05210
Pik3r2Ratendometrial cancer pathway   IEA 6907045 KEGGrno:05213
Pik3r2RatEntamoebiasis pathway  IEA 6907045 KEGGrno:05146
Pik3r2Ratepidermal growth factor/neuregulin signaling pathway   IEA 6907045 KEGGrno:04012
Pik3r2RatFc epsilon receptor mediated signaling pathway  IEA 6907045 KEGGrno:04664
Pik3r2RatFc gamma receptor mediated signaling pathway  IEA 6907045 KEGGrno:04666
Pik3r2Ratglioma pathway  IEA 6907045 KEGGrno:05214
Pik3r2Rathepatitis C pathway  IEA 6907045 KEGGrno:05160
Pik3r2Ratinfluenza A pathway  IEA 6907045 KEGGrno:05164
Pik3r2Ratinsulin signaling pathway   IEA 6907045 KEGGrno:04910
Pik3r2RatJak-Stat signaling pathway   IEA 6907045 KEGGrno:04630
Pik3r2Ratmeasles pathway  IEA 6907045 KEGGrno:05162
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Imported Annotations - PID (archival)


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#
Reference Title
Reference Citation
1. p85ß phosphoinositide 3-kinase subunit regulates tumor progression. Cortés I, etal., Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11318-23. doi: 10.1073/pnas.1118138109. Epub 2012 Jun 25.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
4. The noncoding RNA, miR-126, suppresses the growth of neoplastic cells by targeting phosphatidylinositol 3-kinase signaling and is frequently lost in colon cancers. Guo C, etal., Genes Chromosomes Cancer. 2008 Nov;47(11):939-46. doi: 10.1002/gcc.20596.
5. Phosphoinositide 3-kinases as a common platform for multi-hormone signaling. Hirsch E, etal., J Endocrinol. 2007 Aug;194(2):243-56.
6. Co-administration of finasteride and the pure anti-oestrogen ICI 182,780 act synergistically in modulating the IGF system in rat prostate. Huynh H, etal., J Endocrinol 2001 Oct;171(1):109-18.
7. A novel 55-kDa regulatory subunit for phosphatidylinositol 3-kinase structurally similar to p55PIK Is generated by alternative splicing of the p85alpha gene. Inukai K, etal., J Biol Chem 1996 Mar 8;271(10):5317-20.
8. Upregulation of MicroRNA-126 Contributes to Endothelial Progenitor Cell Function in Deep Vein Thrombosis via Its Target PIK3R2. Meng Q, etal., J Cell Biochem. 2015 Aug;116(8):1613-23. doi: 10.1002/jcb.25115.
9. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
10. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
11. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
12. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
13. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
14. GOA pipeline RGD automated data pipeline
15. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
16. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
17. MicroRNA126 inhibits proliferation and metastasis by targeting pik3r2 in prostate cancer. Song L, etal., Mol Med Rep. 2016 Feb;13(2):1204-10. doi: 10.3892/mmr.2015.4661. Epub 2015 Dec 9.
18. Dominant negative inhibitors of signalling through the phosphoinositol 3-kinase pathway for gene therapy of pancreatic cancer. Stoll V, etal., Gut. 2005 Jan;54(1):109-16. doi: 10.1136/gut.2004.046706.
19. Tentative Sequence Identification Numbers Tentative Sequence Data IDs. TIGR Gene Index, Rat Data
20. Garlic Oil Suppressed Nitrosodiethylamine-Induced Hepatocarcinoma in Rats by Inhibiting PI3K-AKT-NF-κB Pathway. Zhang CL, etal., Int J Biol Sci. 2015 Apr 25;11(6):643-51. doi: 10.7150/ijbs.10785. eCollection 2015.
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PMID:9748281   PMID:10627473   PMID:11120660   PMID:12477932   PMID:18694566   PMID:20348926   PMID:20624904   PMID:23604317   PMID:24349482   PMID:25217619   PMID:29042193   PMID:33029740  
PMID:38063094  



Pik3r2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81618,699,389 - 18,708,045 (+)NCBIGRCr8
mRatBN7.21618,665,517 - 18,674,067 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1618,665,457 - 18,674,065 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1618,707,923 - 18,716,460 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01619,840,602 - 19,849,140 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01618,760,867 - 18,769,404 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01620,415,109 - 20,424,982 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1620,416,432 - 20,424,980 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01620,273,500 - 20,282,051 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41619,171,101 - 19,179,650 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11619,171,098 - 19,179,648 (+)NCBI
Celera1618,857,756 - 18,866,282 (+)NCBICelera
Cytogenetic Map16p14NCBI
PIK3R2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381918,153,163 - 18,170,532 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1918,153,163 - 18,170,540 (+)EnsemblGRCh38hg38GRCh38
GRCh371918,263,973 - 18,281,342 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361918,125,016 - 18,142,343 (+)NCBINCBI36Build 36hg18NCBI36
Build 341918,125,015 - 18,142,343NCBI
Celera1918,165,735 - 18,183,085 (+)NCBICelera
Cytogenetic Map19p13.11NCBI
HuRef1917,827,466 - 17,844,856 (+)NCBIHuRef
CHM1_11918,263,528 - 18,280,901 (+)NCBICHM1_1
T2T-CHM13v2.01918,287,263 - 18,304,664 (+)NCBIT2T-CHM13v2.0
Pik3r2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39871,220,820 - 71,229,356 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl871,220,820 - 71,229,357 (-)EnsemblGRCm39 Ensembl
GRCm38870,768,176 - 70,776,712 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl870,768,176 - 70,776,713 (-)EnsemblGRCm38mm10GRCm38
MGSCv37873,292,080 - 73,300,611 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36873,697,168 - 73,705,670 (-)NCBIMGSCv36mm8
Celera873,329,482 - 73,338,028 (-)NCBICelera
Cytogenetic Map8B3.3NCBI
cM Map834.15NCBI
Pik3r2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555243,234,111 - 3,241,173 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049555243,234,111 - 3,241,445 (-)NCBIChiLan1.0ChiLan1.0
PIK3R2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22023,013,784 - 23,031,178 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11922,022,130 - 22,039,523 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01917,632,265 - 17,649,664 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11918,608,470 - 18,624,185 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1918,611,179 - 18,624,177 (+)Ensemblpanpan1.1panPan2
PIK3R2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12044,826,037 - 44,838,449 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2044,826,339 - 44,836,558 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2044,739,520 - 44,751,946 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02045,311,340 - 45,323,770 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2045,311,351 - 45,321,865 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12044,548,506 - 44,560,928 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02044,958,996 - 44,971,420 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02045,234,496 - 45,247,145 (-)NCBIUU_Cfam_GSD_1.0
Pik3r2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118203,461,387 - 203,472,734 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365963,010,488 - 3,021,920 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365963,010,526 - 3,021,848 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PIK3R2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl259,637,371 - 59,652,073 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1259,637,363 - 59,652,075 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2259,195,762 - 59,210,463 (+)NCBISscrofa10.2Sscrofa10.2susScr3
PIK3R2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1616,620,673 - 16,637,511 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl616,621,606 - 16,636,937 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660742,738,902 - 2,757,694 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pik3r2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046249081,513,969 - 1,523,295 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046249081,513,916 - 1,523,723 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Pik3r2
29 total Variants

Predicted Target Of
Summary Value
Count of predictions:304
Count of miRNA genes:191
Interacting mature miRNAs:221
Transcripts:ENSRNOT00000026210
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 28 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
631561Hcuc2Hepatic copper content QTL 22.8liver copper amount (VT:0003065)liver total copper weight (CMO:0001507)16139533949Rat
1582235Insul8Insulin level QTL 83.30.0063blood insulin amount (VT:0001560)calculated serum insulin level (CMO:0000359)16126727669Rat
2307172Activ4Activity QTL 43.710.00023locomotor behavior trait (VT:0001392)number of entries into a discrete space in an experimental apparatus (CMO:0000960)16133418960Rat
1354584Despr6Despair related QTL 63.10.0067locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16139533930Rat
2302380Slep6Serum leptin concentration QTL 63.36blood leptin amount (VT:0005667)serum leptin level (CMO:0000780)16132139025Rat
737819Hcas4Hepatocarcinoma susceptibility QTL 44.43liver integrity trait (VT:0010547)volume of individual liver tumorous lesion (CMO:0001078)16422760946975965Rat
631517Scl9Serum cholesterol level QTL 93.3blood cholesterol amount (VT:0000180)serum total cholesterol level (CMO:0000363)161572643321034895Rat
9590151Scort8Serum corticosterone level QTL 88.450.001blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)16130836262Rat
1354625Despr7Despair related QTL 73.160.016locomotor behavior trait (VT:0001392)amount of time spent in voluntary immobility (CMO:0001043)16144977551Rat
61338Bp23Blood pressure QTL 234.3arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)16422760949227609Rat

1 to 10 of 28 rows
AI169383  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21618,664,576 - 18,664,704 (+)MAPPERmRatBN7.2
Rnor_6.01620,415,492 - 20,415,619NCBIRnor6.0
Rnor_5.01620,272,560 - 20,272,687UniSTSRnor5.0
RGSC_v3.41619,170,161 - 19,170,288UniSTSRGSC3.4
Celera1618,856,816 - 18,856,943UniSTS
RH 3.4 Map16192.0UniSTS
Cytogenetic Map16p14UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31



Ensembl Acc Id: ENSRNOT00000026210   ⟹   ENSRNOP00000026210
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1618,665,457 - 18,674,065 (+)Ensembl
Rnor_6.0 Ensembl1620,416,432 - 20,424,980 (+)Ensembl
RefSeq Acc Id: NM_022185   ⟹   NP_071521
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81618,699,497 - 18,708,045 (+)NCBI
mRatBN7.21618,665,517 - 18,674,065 (+)NCBI
Rnor_6.01620,416,432 - 20,424,980 (+)NCBI
Rnor_5.01620,273,500 - 20,282,051 (+)NCBI
RGSC_v3.41619,171,101 - 19,179,650 (+)RGD
Celera1618,857,756 - 18,866,282 (+)RGD
Sequence:
RefSeq Acc Id: XM_039094436   ⟹   XP_038950364
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81618,699,389 - 18,708,045 (+)NCBI
mRatBN7.21618,667,125 - 18,674,067 (+)NCBI
RefSeq Acc Id: XM_063275283   ⟹   XP_063131353
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81618,699,400 - 18,708,045 (+)NCBI
1 to 9 of 9 rows
Protein RefSeqs NP_071521 (Get FASTA)   NCBI Sequence Viewer  
  XP_038950364 (Get FASTA)   NCBI Sequence Viewer  
  XP_063131353 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH89805 (Get FASTA)   NCBI Sequence Viewer  
  BAA10926 (Get FASTA)   NCBI Sequence Viewer  
  EDL90737 (Get FASTA)   NCBI Sequence Viewer  
  EDL90738 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000026210
GenBank Protein Q63788 (Get FASTA)   NCBI Sequence Viewer  
1 to 9 of 9 rows
RefSeq Acc Id: NP_071521   ⟸   NM_022185
- UniProtKB: Q63788 (UniProtKB/Swiss-Prot),   Q5FVS6 (UniProtKB/TrEMBL),   A6KA00 (UniProtKB/TrEMBL),   F7F9A3 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000026210   ⟸   ENSRNOT00000026210
RefSeq Acc Id: XP_038950364   ⟸   XM_039094436
- Peptide Label: isoform X1
- UniProtKB: Q63788 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_063131353   ⟸   XM_063275283
- Peptide Label: isoform X2
- UniProtKB: Q63788 (UniProtKB/Swiss-Prot),   A6KA00 (UniProtKB/TrEMBL),   F7F9A3 (UniProtKB/TrEMBL),   Q5FVS6 (UniProtKB/TrEMBL)
Rho-GAP   SH2   SH3

Name Modeler Protein Id AA Range Protein Structure
AF-Q63788-F1-model_v2 AlphaFold Q63788 1-722 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13700016
Promoter ID:EPDNEW_R10538
Type:initiation region
Name:Pik3r2_1
Description:phosphoinositide-3-kinase regulatory subunit 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.01620,416,374 - 20,416,434EPDNEW


1 to 40 of 47 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-11808 BioCyc
BioCyc Pathway PWY-6352 [3-phosphoinositide biosynthesis] BioCyc
BioCyc Pathway Image PWY-6352 BioCyc
Ensembl Genes ENSRNOG00000019228 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000026210 ENTREZGENE
Gene3D-CATH 1.10.287.1490 UniProtKB/Swiss-Prot
  1.10.555.10 UniProtKB/Swiss-Prot
  3.30.505.10 UniProtKB/Swiss-Prot
  SH3 Domains UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7381613 IMAGE-MGC_LOAD
InterPro PI3K_P85_iSH2 UniProtKB/Swiss-Prot
  PI3K_p85beta_SH3 UniProtKB/Swiss-Prot
  PI3kinase_P85_cSH2 UniProtKB/Swiss-Prot
  PI3kinase_P85_nSH2 UniProtKB/Swiss-Prot
  Rho_GTPase_activation_prot UniProtKB/Swiss-Prot
  RhoGAP_dom UniProtKB/Swiss-Prot
  SH2 UniProtKB/Swiss-Prot
  SH2_dom_sf UniProtKB/Swiss-Prot
  SH3-like_dom_sf UniProtKB/Swiss-Prot
  SH3_domain UniProtKB/Swiss-Prot
MGC_CLONE MGC:108697 IMAGE-MGC_LOAD
NCBI Gene 29741 ENTREZGENE
PANTHER PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT UniProtKB/Swiss-Prot
  PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT BETA UniProtKB/Swiss-Prot
Pfam PI3K_P85_iSH2 UniProtKB/Swiss-Prot
  RhoGAP UniProtKB/Swiss-Prot
  SH2 UniProtKB/Swiss-Prot
PhenoGen Pik3r2 PhenoGen
PRINTS PI3KINASEP85 UniProtKB/Swiss-Prot
  SH2DOMAIN UniProtKB/Swiss-Prot
PROSITE RHOGAP UniProtKB/Swiss-Prot
  SH2 UniProtKB/Swiss-Prot
  SH3 UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000019228 RatGTEx
SMART RhoGAP UniProtKB/Swiss-Prot
  SH2 UniProtKB/Swiss-Prot
  SH3 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48350 UniProtKB/Swiss-Prot
  SSF50044 UniProtKB/Swiss-Prot
  SSF55550 UniProtKB/Swiss-Prot
1 to 40 of 47 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-30 Pik3r2  phosphoinositide-3-kinase regulatory subunit 2  Pik3r2  phosphoinositide-3-kinase, regulatory subunit 2 (beta)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-09-09 Pik3r2  phosphoinositide-3-kinase, regulatory subunit 2 (beta)  Pik3r2  phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2008-02-18 Pik3r2  phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)  Pik3r2  phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2003-04-09 Pik3r2  phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2  Pik3r2  phosphatidylinositol 3-kinase, regulartory subunit, polypeptide 2  Name updated 629478 APPROVED
2002-06-10 Pik3r2  phosphatidylinositol 3-kinase, regulartory subunit, polypeptide 2  Pik3r2  phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)  Name updated 70584 APPROVED

Note Type Note Reference