Nln (neurolysin) - Rat Genome Database

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Gene: Nln (neurolysin) Rattus norvegicus
Analyze
Symbol: Nln
Name: neurolysin
RGD ID: 621518
Description: Enables metalloendopeptidase activity and oligopeptidase activity. Involved in peptide catabolic process and protein catabolic process. Is active in mitochondrial intermembrane space. Orthologous to human NLN (neurolysin); PARTICIPATES IN renin-angiotensin cascade pathway; INTERACTS WITH 1,10-phenanthroline; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: MEP; microsomal endopeptidase; mitochondrial oligopeptidase M; neurolysin (metallopeptidase M3 family); neurolysin, mitochondrial; neurotensin endopeptidase
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8236,867,436 - 36,966,749 (-)NCBIGRCr8
mRatBN7.2235,133,634 - 35,232,927 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl235,134,145 - 35,232,914 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx242,248,083 - 42,345,656 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0240,306,773 - 40,404,352 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0235,163,341 - 35,261,069 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0234,086,970 - 34,185,835 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl234,087,880 - 34,185,812 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0253,215,233 - 53,314,136 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4234,915,111 - 35,031,566 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1234,835,479 - 34,951,935 (-)NCBI
Celera231,110,866 - 31,209,296 (-)NCBICelera
Cytogenetic Map2q13NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NlnRatCOVID-19  ISONLN (Homo sapiens)9068941mRNA:increased expression:peripheral blood mononuclear cell (human)RGDPMID:32228226 and REF_RGD_ID:28912744
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NlnRatNeurodevelopmental Disorders  ISONLN (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868

1 to 20 of 103 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NlnRat(1->4)-beta-D-glucan multiple interactionsISONln (Mus musculus)6480464[perfluorooctane sulfonic acid co-treated with Cellulose] results in increased expression of NLN mRNACTDPMID:36331819
NlnRat1,10-phenanthroline decreases activityEXP 98311551 and 10-phenanthroline decreases activity of Nln proteinRGD 
NlnRat17beta-estradiol increases expressionISONLN (Homo sapiens)6480464Estradiol results in increased expression of NLN mRNACTDPMID:31614463
NlnRat17beta-hydroxy-17-methylestra-4,9,11-trien-3-one increases expressionISONLN (Homo sapiens)6480464Metribolone results in increased expression of NLN proteinCTDPMID:17152098
NlnRat2,3,7,8-tetrachlorodibenzodioxine affects expressionISONln (Mus musculus)6480464Tetrachlorodibenzodioxin affects the expression of NLN mRNACTDPMID:21570461
NlnRat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of NLN mRNACTDPMID:33387578
NlnRat2,3,7,8-tetrachlorodibenzodioxine increases expressionEXP 6480464Tetrachlorodibenzodioxin results in increased expression of NLN mRNACTDPMID:34747641
NlnRat2,4-dinitrotoluene affects expressionEXP 64804642 and 4-dinitrotoluene affects the expression of NLN mRNACTDPMID:21346803
NlnRat3,3',4,4'-tetrachlorobiphenyl multiple interactionsISONln (Mus musculus)64804643 more ...CTDPMID:19467301
NlnRat3,4-methylenedioxymethamphetamine increases expressionISONln (Mus musculus)6480464N-Methyl-3 and 4-methylenedioxyamphetamine results in increased expression of NLN mRNACTDPMID:26251327
NlnRat3-chloropropane-1,2-diol increases expressionEXP 6480464alpha-Chlorohydrin results in increased expression of NLN proteinCTDPMID:34915118
NlnRat4,4'-sulfonyldiphenol increases expressionISONLN (Homo sapiens)6480464bisphenol S results in increased expression of NLN proteinCTDPMID:34186270
NlnRat4-hydroxyphenyl retinamide decreases expressionISONln (Mus musculus)6480464Fenretinide results in decreased expression of NLN mRNACTDPMID:28973697
NlnRat4-phenylbutyric acid decreases expressionISONLN (Homo sapiens)64804644-phenylbutyric acid results in decreased expression of NLN mRNACTDPMID:14583596
NlnRat6-propyl-2-thiouracil increases expressionEXP 6480464Propylthiouracil results in increased expression of NLN mRNACTDPMID:24780913
NlnRatacrolein multiple interactionsISONLN (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of NLN mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased oxidation of NLN mRNACTDPMID:32699268
NlnRatacrylamide decreases expressionISONLN (Homo sapiens)6480464Acrylamide results in decreased expression of NLN mRNACTDPMID:32763439
NlnRataflatoxin B1 decreases methylationISONLN (Homo sapiens)6480464Aflatoxin B1 results in decreased methylation of NLN intronCTDPMID:30157460
NlnRatall-trans-retinoic acid decreases expressionISONLN (Homo sapiens)6480464Tretinoin results in decreased expression of NLN mRNACTDPMID:33167477
NlnRatalpha-pinene multiple interactionsISONLN (Homo sapiens)6480464[Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone] results in increased oxidation of NLN mRNA and [Air Pollutants results in increased abundance of [Acrolein co-treated with methacrylaldehyde co-treated with alpha-pinene co-treated with Ozone]] which results in increased oxidation of NLN mRNACTDPMID:32699268

1 to 20 of 103 rows

Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NlnRatpeptide catabolic process involved_inIDA 152025518PMID:12500972UniProt 
NlnRatpeptide metabolic process involved_inIBAMGI:1354165 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
NlnRatprotein catabolic process  IDA 9831155 RGD 
NlnRatproteolysis involved_inIEAUniProtKB-KW:KW-06451600115GO_REF:0000043UniProtGO_REF:0000043
NlnRatproteolysis involved_inIBAPANTHER:PTN000211184 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
NlnRatproteolysis involved_inIEAInterPro:IPR001567 and InterPro:IPR0450901600115GO_REF:0000002InterProGO_REF:0000002
NlnRatregulation of gluconeogenesis acts_upstream_of_or_withinISONln (Mus musculus)1624291MGI:4125183 PMID:24719317RGDPMID:24719317
NlnRatregulation of skeletal muscle fiber differentiation acts_upstream_of_or_withinISONln (Mus musculus)1624291MGI:4125183 PMID:24719333RGDPMID:24719333

Cellular Component
1 to 10 of 10 rows

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NlnRatcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
NlnRatcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
NlnRatcytosol located_inISONLN (Sus scrofa)1624291 PMID:9182559RGDPMID:9182559
NlnRatcytosol located_inIEAUniProtKB-SubCell:SL-00911600115GO_REF:0000044UniProtGO_REF:0000044
NlnRatmitochondrial intermembrane space is_active_inIDA 9831155PMID:7836437FlyBase 
NlnRatmitochondrial intermembrane space is_active_inIBAPANTHER:PTN000211242 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
NlnRatmitochondrial intermembrane space located_inIEAUniProtKB-SubCell:SL-01691600115GO_REF:0000044UniProtGO_REF:0000044
NlnRatmitochondrion located_inISONLN (Sus scrofa)1624291 PMID:9182559RGDPMID:9182559
NlnRatmitochondrion located_inIEAUniProtKB-KW:KW-04961600115GO_REF:0000043UniProtGO_REF:0000043
NlnRatplasma membrane located_inISONln (Mus musculus)1624291 PMID:22039052RGDPMID:22039052
1 to 10 of 10 rows

Molecular Function
1 to 14 of 14 rows

  
Object Symbol
Species
Term
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Evidence
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Reference
Notes
Source
Original Reference(s)
NlnRathydrolase activity enablesIEAUniProtKB-KW:KW-03781600115GO_REF:0000043UniProtGO_REF:0000043
NlnRatmetal ion binding enablesIEAUniRule:UR0000004531600115GO_REF:0000104UniProtGO_REF:0000104
NlnRatmetal ion binding enablesIEAUniProtKB-KW:KW-04791600115GO_REF:0000043UniProtGO_REF:0000043
NlnRatmetalloendopeptidase activity enablesIEAInterPro:IPR001567 and InterPro:IPR0450901600115GO_REF:0000002InterProGO_REF:0000002
NlnRatmetalloendopeptidase activity enablesIBAMGI:1354165 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
NlnRatmetalloendopeptidase activity  IDA 9831155 RGD 
NlnRatmetallopeptidase activity enablesIEAInterPro:IPR0240791600115GO_REF:0000002InterProGO_REF:0000002
NlnRatmetallopeptidase activity enablesIEAUniProtKB-KW:KW-04821600115GO_REF:0000043UniProtGO_REF:0000043
NlnRatoligopeptidase activity  IDA 9831155 RGD 
NlnRatpeptidase activity enablesIDA 152025518PMID:12500972UniProt 
NlnRatpeptidase activity enablesISONln (Mus musculus)1624291MGI:4125183 PMID:24719317RGDPMID:24719317
NlnRatpeptidase activity enablesIEAARBA:ARBA000274081600115GO_REF:0000117UniProtGO_REF:0000117
NlnRatpeptidase activity enablesIEAUniProtKB-KW:KW-06451600115GO_REF:0000043UniProtGO_REF:0000043
NlnRatpeptide binding enablesISONln (Mus musculus)1624291MGI:87963 PMID:22039052RGDPMID:22039052
1 to 14 of 14 rows

Imported Annotations - KEGG (archival)

Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
NlnRatrenin-angiotensin cascade pathway   IEA 6907045 KEGGrno:04614

1 to 12 of 12 rows
#
Reference Title
Reference Citation
1. Molecular cloning and expression of rat brain endopeptidase 3.4.24.16. Dauch P, etal., J Biol Chem 1995 Nov 10;270(45):27266-71.
2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
3. Rat ISS GO annotations from MGI mouse gene data--August 2006 MGD data from the GO Consortium
4. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
5. Metalloendopeptidases EC 3.4.24.15/16 regulate bradykinin activity in the cerebral microvasculature. Norman MU, etal., Am J Physiol Heart Circ Physiol 2003 Jun;284(6):H1942-8. Epub 2003 Feb 13.
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. Mapping sequence differences between thimet oligopeptidase and neurolysin implicates key residues in substrate recognition. Ray K, etal., Protein Sci 2002 Sep;11(9):2237-46.
8. GOA pipeline RGD automated data pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Novel natural peptide substrates for endopeptidase 24.15, neurolysin, and angiotensin-converting enzyme. Rioli V, etal., J Biol Chem. 2003 Mar 7;278(10):8547-55. doi: 10.1074/jbc.M212030200. Epub 2002 Dec 24.
11. Characterization of a mitochondrial metallopeptidase reveals neurolysin as a homologue of thimet oligopeptidase. Serizawa A, etal., J Biol Chem. 1995 Feb 3;270(5):2092-8.
12. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, etal., Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16899-903. Epub 2002 Dec 11.
1 to 12 of 12 rows
PMID:9182559   PMID:11248043   PMID:12609826   PMID:16515556   PMID:17882707   PMID:18614015   PMID:22039052   PMID:23412923   PMID:24719317   PMID:24719333   PMID:25378390  



Nln
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8236,867,436 - 36,966,749 (-)NCBIGRCr8
mRatBN7.2235,133,634 - 35,232,927 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl235,134,145 - 35,232,914 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx242,248,083 - 42,345,656 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0240,306,773 - 40,404,352 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0235,163,341 - 35,261,069 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0234,086,970 - 34,185,835 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl234,087,880 - 34,185,812 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0253,215,233 - 53,314,136 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4234,915,111 - 35,031,566 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1234,835,479 - 34,951,935 (-)NCBI
Celera231,110,866 - 31,209,296 (-)NCBICelera
Cytogenetic Map2q13NCBI
NLN
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38565,722,205 - 65,829,283 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl565,722,205 - 65,871,725 (+)EnsemblGRCh38hg38GRCh38
GRCh37565,018,032 - 65,125,111 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36565,053,841 - 65,155,149 (+)NCBINCBI36Build 36hg18NCBI36
Build 34565,053,840 - 65,155,143NCBI
Celera562,016,491 - 62,123,591 (+)NCBICelera
Cytogenetic Map5q12.3NCBI
HuRef561,976,109 - 62,083,226 (+)NCBIHuRef
CHM1_1565,017,717 - 65,124,844 (+)NCBICHM1_1
T2T-CHM13v2.0566,543,992 - 66,651,091 (+)NCBIT2T-CHM13v2.0
Nln
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3913104,159,558 - 104,246,170 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl13104,159,565 - 104,246,122 (-)EnsemblGRCm39 Ensembl
GRCm3813104,023,050 - 104,109,673 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl13104,023,057 - 104,109,614 (-)EnsemblGRCm38mm10GRCm38
MGSCv3713104,813,519 - 104,899,694 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3613105,143,604 - 105,229,957 (-)NCBIMGSCv36mm8
Celera13108,414,173 - 108,500,684 (-)NCBICelera
Cytogenetic Map13D1NCBI
cM Map1356.16NCBI
Nln
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554463,256,078 - 3,374,462 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554463,258,278 - 3,374,337 (-)NCBIChiLan1.0ChiLan1.0
NLN
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2448,098,743 - 48,198,296 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1546,242,006 - 46,351,916 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0548,180,768 - 48,283,281 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1549,834,121 - 49,938,192 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl549,840,482 - 49,938,192 (-)Ensemblpanpan1.1panPan2
NLN
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1251,445,941 - 51,551,425 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl251,444,566 - 51,538,028 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha248,400,415 - 48,494,439 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0251,935,923 - 52,030,529 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl251,935,938 - 52,041,328 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1248,995,440 - 49,095,747 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0249,784,767 - 49,878,766 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0250,676,985 - 50,771,434 (+)NCBIUU_Cfam_GSD_1.0
Nln
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213194,447,083 - 194,544,535 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364803,383,540 - 3,481,009 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364803,383,514 - 3,480,991 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NLN
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1644,225,677 - 44,334,610 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11644,225,706 - 44,333,623 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21647,574,962 - 47,681,332 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NLN
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1461,918,079 - 62,022,517 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl461,918,137 - 62,016,144 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604910,561,550 - 10,666,098 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nln
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248154,017,514 - 4,162,237 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248154,020,212 - 4,162,233 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Nln
362 total Variants


Assembly: Rnor_5.0

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
2 53278835 53278836 C T snv NIG-III/Hok (KyushuU) View more Information

Predicted Target Of
Summary Value
Count of predictions:86
Count of miRNA genes:65
Interacting mature miRNAs:78
Transcripts:ENSRNOT00000066925
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 38 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
10755430Coatc6Coat color QTL 60.02576coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)21159110056591100Rat
7387318Stl32Serum triglyceride level QTL 323.20.0003blood triglyceride amount (VT:0002644)plasma triglyceride level (CMO:0000548)22238462767384627Rat
10755436Coatc8Coat color QTL 80.02431coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23502311780023117Rat
631682Bp115Blood pressure QTL 1154.30.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)2137410502Rat
10755434Coatc7Coat color QTL 70.04794coat/hair pigmentation trait (VT:0010463)pigmented ventral coat/hair area to total ventral coat/hair area ratio (CMO:0001812)23064806575648065Rat
10755499Bp389Blood pressure QTL 3892.61arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)218960362228801039Rat
738010Lnnr3Liver neoplastic nodule remodeling QTL 32.94liver integrity trait (VT:0010547)liver remodeling tumorous lesion number (CMO:0001461)2141244106Rat
1358917Cm42Cardiac mass QTL 422.82heart mass (VT:0007028)heart weight to body weight ratio (CMO:0000074)225413423203928301Rat
1300160Hrtrt3Heart rate QTL 33.62heart pumping trait (VT:2000009)absolute change in heart rate (CMO:0000534)22997159351729300Rat
731167Glom4Glomerulus QTL 42.40.0082kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)22030467265304672Rat

1 to 10 of 38 rows
D2Mgh1  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr8236,868,643 - 36,868,772 (+)Marker Load Pipeline
mRatBN7.2235,134,841 - 35,134,970 (+)MAPPERmRatBN7.2
Rnor_6.0234,088,175 - 34,088,303NCBIRnor6.0
Rnor_5.0253,216,438 - 53,216,566UniSTSRnor5.0
RGSC_v3.4234,914,943 - 34,915,072RGDRGSC3.4
RGSC_v3.4234,914,944 - 34,915,072UniSTSRGSC3.4
RGSC_v3.1234,835,312 - 34,835,441RGD
Celera231,110,695 - 31,110,827UniSTS
RH 3.4 Map2126.7UniSTS
RH 3.4 Map2126.7RGD
RH 2.0 Map2189.6RGD
SHRSP x BN Map215.0498RGD
FHH x ACI Map223.0699RGD
Cytogenetic Map2q13UniSTS
RH132947  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2235,231,684 - 35,232,738 (+)MAPPERmRatBN7.2
Rnor_6.0234,184,591 - 34,185,644NCBIRnor6.0
Rnor_5.0253,312,891 - 53,313,944UniSTSRnor5.0
RGSC_v3.4235,030,475 - 35,031,528UniSTSRGSC3.4
Celera231,208,205 - 31,209,258UniSTS
RH 3.4 Map2139.8UniSTS
Cytogenetic Map2q13UniSTS
BM382907  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2235,135,013 - 35,135,165 (+)MAPPERmRatBN7.2
Rnor_6.0234,088,347 - 34,088,498NCBIRnor6.0
Rnor_5.0253,216,610 - 53,216,761UniSTSRnor5.0
RGSC_v3.4234,915,116 - 34,915,267UniSTSRGSC3.4
Celera231,110,871 - 31,111,022UniSTS
RH 3.4 Map2123.4UniSTS
Cytogenetic Map2q13UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 16 of 16 rows
RefSeq Transcripts NM_053970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006231880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006231881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017590591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101583 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039101585 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063281171 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005500227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC129167 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC072687 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ228111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FQ230641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAXUCZ010000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X87157 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 16 of 16 rows

Ensembl Acc Id: ENSRNOT00000066925   ⟹   ENSRNOP00000059652
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl235,135,300 - 35,232,914 (-)Ensembl
Rnor_6.0 Ensembl234,088,342 - 34,185,682 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000082755   ⟹   ENSRNOP00000069520
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl235,134,145 - 35,197,739 (-)Ensembl
Rnor_6.0 Ensembl234,087,880 - 34,185,812 (-)Ensembl
RefSeq Acc Id: NM_053970   ⟹   NP_446422
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8236,868,811 - 36,966,572 (-)NCBI
mRatBN7.2235,135,009 - 35,232,776 (-)NCBI
Rnor_6.0234,088,342 - 34,185,682 (-)NCBI
Rnor_5.0253,215,233 - 53,314,136 (-)NCBI
RGSC_v3.4234,915,111 - 35,031,566 (-)RGD
Celera231,110,866 - 31,209,296 (-)RGD
Sequence:
RefSeq Acc Id: XM_006231880   ⟹   XP_006231942
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8236,869,341 - 36,966,729 (-)NCBI
mRatBN7.2235,135,539 - 35,232,925 (-)NCBI
Rnor_6.0234,097,165 - 34,185,835 (-)NCBI
Rnor_5.0253,215,233 - 53,314,136 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039101583   ⟹   XP_038957511
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8236,867,436 - 36,966,749 (-)NCBI
mRatBN7.2235,133,634 - 35,232,925 (-)NCBI
RefSeq Acc Id: XM_039101584   ⟹   XP_038957512
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8236,867,436 - 36,966,717 (-)NCBI
mRatBN7.2235,133,637 - 35,232,926 (-)NCBI
RefSeq Acc Id: XM_039101585   ⟹   XP_038957513
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8236,885,894 - 36,966,729 (-)NCBI
mRatBN7.2235,153,414 - 35,232,927 (-)NCBI
RefSeq Acc Id: XM_063281171   ⟹   XP_063137241
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8236,884,537 - 36,966,729 (-)NCBI
RefSeq Acc Id: XR_005500227
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8236,869,338 - 36,966,729 (-)NCBI
mRatBN7.2235,135,536 - 35,232,925 (-)NCBI
RefSeq Acc Id: NP_446422   ⟸   NM_053970
- Peptide Label: precursor
- UniProtKB: Q6GQQ4 (UniProtKB/Swiss-Prot),   P42676 (UniProtKB/Swiss-Prot),   A0A0G2JSY3 (UniProtKB/TrEMBL),   A6I5E6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006231942   ⟸   XM_006231880
- Peptide Label: isoform X3
- UniProtKB: Q6GQQ4 (UniProtKB/Swiss-Prot),   P42676 (UniProtKB/Swiss-Prot)
- Sequence:
Ensembl Acc Id: ENSRNOP00000069520   ⟸   ENSRNOT00000082755
Ensembl Acc Id: ENSRNOP00000059652   ⟸   ENSRNOT00000066925
RefSeq Acc Id: XP_038957511   ⟸   XM_039101583
- Peptide Label: isoform X1
- UniProtKB: Q6GQQ4 (UniProtKB/Swiss-Prot),   P42676 (UniProtKB/Swiss-Prot)
Peptidase M3A/M3B catalytic

Name Modeler Protein Id AA Range Protein Structure
AF-P42676-F1-model_v2 AlphaFold P42676 1-704 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen

RGD ID:13691119
Promoter ID:EPDNEW_R1644
Type:initiation region
Name:Nln_1
Description:neurolysin
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0234,185,744 - 34,185,804EPDNEW


1 to 31 of 31 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-54558 BioCyc
Ensembl Genes ENSRNOG00000011561 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000066925 ENTREZGENE
  ENSRNOT00000082755 ENTREZGENE
  ENSRNOT00000165562 ENTREZGENE
Gene3D-CATH 1.10.1370.10 UniProtKB/Swiss-Prot
  3.40.390.10 UniProtKB/Swiss-Prot
  Endopeptidase. Chain P, domain 1 UniProtKB/Swiss-Prot
IMAGE_CLONE IMAGE:7099208 IMAGE-MGC_LOAD
InterPro MetalloPept_cat_dom_sf UniProtKB/Swiss-Prot
  Neurolysin/TOP_dom2 UniProtKB/Swiss-Prot
  Neurolysin/TOP_N UniProtKB/Swiss-Prot
  Pept_M3A_M3B UniProtKB/Swiss-Prot
  Pept_M3A_M3B UniProtKB/Swiss-Prot
KEGG Report rno:117041 UniProtKB/Swiss-Prot
MGC_CLONE MGC:91547 IMAGE-MGC_LOAD
NCBI Gene 117041 ENTREZGENE
PANTHER NEUROLYSIN, MITOCHONDRIAL UniProtKB/Swiss-Prot
  PTHR11804 UniProtKB/Swiss-Prot
Pfam Peptidase_M3 UniProtKB/Swiss-Prot
PhenoGen Nln PhenoGen
PROSITE ZINC_PROTEASE UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000011561 RatGTEx
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/Swiss-Prot
UniProt A0A0G2JSY3 ENTREZGENE, UniProtKB/TrEMBL
  A0A0G2JVK4 ENTREZGENE, UniProtKB/TrEMBL
  A6I5E6 ENTREZGENE, UniProtKB/TrEMBL
  A6I5E7_RAT UniProtKB/TrEMBL
  NEUL_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q6GQQ4 ENTREZGENE
UniProt Secondary Q6GQQ4 UniProtKB/Swiss-Prot
1 to 31 of 31 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-02-03 Nln  neurolysin  Nln  neurolysin (metallopeptidase M3 family)  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Nln  neurolysin (metallopeptidase M3 family)      Symbol and Name status set to approved 1299863 APPROVED
2002-08-07 Nln  neurolysin (metallopeptidase M3 family)      Symbol and Name status set to provisional 70820 PROVISIONAL

Note Type Note Reference
gene_expression expressed in brain, ileum, kidney, and testis 729279
gene_protein 704-amino acid protein 729279