Pak2 (p21 (RAC1) activated kinase 2) - Rat Genome Database

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Gene: Pak2 (p21 (RAC1) activated kinase 2) Rattus norvegicus
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Symbol: Pak2
Name: p21 (RAC1) activated kinase 2
RGD ID: 61953
Description: Predicted to enable several functions, including enzyme binding activity; identical protein binding activity; and protein tyrosine kinase activator activity. Involved in cardiac muscle hypertrophy and cellular response to transforming growth factor beta stimulus. Located in secretory granule. Biomarker of ureteral obstruction. Human ortholog(s) of this gene implicated in ductal carcinoma in situ. Orthologous to human PAK2 (p21 (RAC1) activated kinase 2); PARTICIPATES IN vascular endothelial growth factor signaling pathway; epidermal growth factor/neuregulin signaling pathway; mitogen activated protein kinase signaling pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,3,7,8-Tetrachlorodibenzofuran; 2,4,6-trinitrobenzenesulfonic acid.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: gamma-PAK; LOC100910732; p21 (CDKN1A)-activated kinase 2; p21 protein (Cdc42/Rac)-activated kinase 2; p21-activated kinase 2; PAK-2; serine/threonine-protein kinase PAK 2; serine/threonine-protein kinase PAK 2-like
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81182,212,896 - 82,273,803 (+)NCBIGRCr8
mRatBN7.21168,707,940 - 68,768,816 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1168,707,969 - 68,768,816 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1177,545,003 - 77,605,878 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01170,206,629 - 70,267,901 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01169,234,099 - 69,294,967 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01172,829,407 - 72,865,815 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1172,829,238 - 72,865,902 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1171,959,228 - 72,021,224 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01175,895,329 - 75,939,106 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41170,529,961 - 70,588,511 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11170,587,549 - 70,646,100 (+)NCBI
Celera1168,130,464 - 68,189,144 (+)NCBICelera
Cytogenetic Map11q22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
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Original Reference(s)
Pak2RatBreast Neoplasms  ISOPAK2 (Homo sapiens)7775026 RGD 
Pak2Ratductal carcinoma in situ  ISOPAK2 (Homo sapiens)7775026 RGD 
Pak2RatPuromycin Aminonucleoside Nephrosis  IEP 9835041 RGD 
Pak2Ratureteral obstruction  IEP 8693572protein:increased activity:kidney:RGD 
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Original Reference(s)
Pak2Ratautistic disorder  ISOPAK2 (Homo sapiens)8554872ClinVar Annotator: match by term: AutismClinVarPMID:21681106 and PMID:30208311
Pak2Ratchromosome 3q29 microdeletion syndrome  ISOPAK2 (Homo sapiens)8554872ClinVar Annotator: match by term: Chromosome 3q29 microdeletion syndromeClinVar 
Pak2RatKnobloch Syndrome  ISOPAK2 (Homo sapiens)8554872ClinVar Annotator: match by term: Knobloch syndromeClinVarPMID:14695535 more ...
Pak2RatKnobloch Syndrome Type II  ISOPAK2 (Homo sapiens)8554872ClinVar Annotator: match by term: Knobloch syndrome 2ClinVarPMID:25741868 more ...
Pak2Ratschizophrenia  ISOPAK2 (Homo sapiens)8554872ClinVar Annotator: match by term: SchizophreniaClinVarPMID:21681106 and PMID:30208311
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Pak2Ratatrial fibrillation  ISOPAK2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:29892015
Pak2Ratproteinuria  ISOPAK2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:20071462
Pak2Ratschizophrenia  ISOPAK2 (Homo sapiens)11554173CTD Direct Evidence: marker/mechanismCTDPMID:20691406
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Pak2Ratautism spectrum disorder  ISSPak2 (Mus musculus)13592920 MouseDO 
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Original Reference(s)
Pak2RatKnobloch Syndrome Type II  ISOPAK2 (Homo sapiens)7240710 OMIM 

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Original Reference(s)
Pak2Rat(-)-citrinin increases activityISOPAK2 (Homo sapiens)6480464[Citrinin results in increased activity of CASP3 protein] which results in increased activity of PAK2 protein and Citrinin results in increased activity of PAK2 proteinCTDPMID:18767140
Pak2Rat(S)-nicotine multiple interactionsISOPak2 (Mus musculus)6480464[Nicotine co-treated with 1-Methyl-4-phenyl-1 more ...CTDPMID:20230807
Pak2Rat1,2-dimethylhydrazine multiple interactionsISOPak2 (Mus musculus)6480464Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in decreased expression of PAK2 mRNA]CTDPMID:22206623
Pak2Rat1,2-dimethylhydrazine decreases expressionISOPak2 (Mus musculus)64804641 and 2-Dimethylhydrazine results in decreased expression of PAK2 mRNACTDPMID:22206623
Pak2Rat1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine multiple interactionsISOPak2 (Mus musculus)6480464[Caffeine co-treated with 1-Methyl-4-phenyl-1 more ...CTDPMID:20230807
Pak2Rat1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine increases expressionISOPak2 (Mus musculus)64804641-Methyl-4-phenyl-1 more ...CTDPMID:20230807
Pak2Rat17alpha-ethynylestradiol multiple interactionsISOPak2 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of PAK2 mRNACTDPMID:17942748
Pak2Rat17beta-estradiol decreases expressionISOPak2 (Mus musculus)6480464Estradiol results in decreased expression of PAK2 mRNACTDPMID:19484750
Pak2Rat17beta-hydroxy-17-methylestra-4,9,11-trien-3-one decreases expressionISOPAK2 (Homo sapiens)6480464Metribolone results in decreased expression of PAK2 proteinCTDPMID:17152098
Pak2Rat2,3,7,8-tetrachlorodibenzodioxine multiple interactionsISOPak2 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in decreased expression of PAK2 mRNACTDPMID:17942748
Pak2Rat2,3,7,8-tetrachlorodibenzodioxine decreases expressionEXP 6480464Tetrachlorodibenzodioxin results in decreased expression of PAK2 mRNACTDPMID:33387578
Pak2Rat2,3,7,8-tetrachlorodibenzodioxine affects expressionEXP 6480464Tetrachlorodibenzodioxin affects the expression of PAK2 mRNACTDPMID:34747641
Pak2Rat2,3,7,8-Tetrachlorodibenzofuran increases expressionEXP 64804642 more ...CTDPMID:32109520
Pak2Rat2,4,6-trinitrobenzenesulfonic acid increases expressionEXP 6480464Trinitrobenzenesulfonic Acid results in increased expression of PAK2 mRNACTDPMID:23537331
Pak2Rat2-amino-14,16-dimethyloctadecan-3-ol increases expressionISOPAK2 (Homo sapiens)64804642-amino-14 and 16-dimethyloctadecan-3-ol results in increased expression of PAK2 proteinCTDPMID:32044396
Pak2Rat2-ethoxyethanol increases expressionEXP 64804642-ethoxyethanol results in increased expression of PAK2 mRNACTDPMID:19643169
Pak2Rat2-methoxyethanol increases expressionEXP 6480464methyl cellosolve results in increased expression of PAK2 mRNACTDPMID:19643169
Pak2Rat4,4'-diaminodiphenylmethane decreases expressionISOPak2 (Mus musculus)64804644 and 4'-diaminodiphenylmethane results in decreased expression of PAK2 mRNACTDPMID:18648102
Pak2Rat4-(ethoxymethylene)-2-phenyloxazol-5-one increases expressionISOPAK2 (Homo sapiens)6480464Oxazolone results in increased expression of PAK2 mRNACTDPMID:23999411
Pak2Rataflatoxin B1 increases methylationISOPAK2 (Homo sapiens)6480464Aflatoxin B1 results in increased methylation of PAK2 geneCTDPMID:27153756

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Biological Process
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Original Reference(s)
Pak2Ratadherens junction assembly involved_inISOPAK2 (Homo sapiens)1624291 PMID:25753039RGDPMID:25753039
Pak2Ratadherens junction assembly involved_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratbicellular tight junction assembly involved_inISOPAK2 (Homo sapiens)1624291 PMID:25753039RGDPMID:25753039
Pak2Ratbicellular tight junction assembly involved_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratcardiac muscle hypertrophy  IEP 9835036 RGD 
Pak2Ratcell migration involved_inIBAFB:FBgn0044826 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pak2Ratcellular response to starvation involved_inIBACGD:CAL0000192143 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pak2Ratcellular response to transforming growth factor beta stimulus  IEP 8693572 RGD 
Pak2Ratdendritic spine development acts_upstream_of_or_withinISOPak2 (Mus musculus)1624291MGI:95564 PMID:23509247RGDPMID:23509247
Pak2Ratdendritic spine development acts_upstream_of_or_withinIEAUniProtKB:Q8CIN4 and ensembl:ENSMUSP000000234671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratintracellular signal transduction involved_inISOPAK2 (Homo sapiens)1624291 PMID:11121037RGDPMID:11121037
Pak2Ratintracellular signal transduction involved_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratintracellular signal transduction involved_inIBACGD:CAL0000187689 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pak2Ratnegative regulation of apoptotic process involved_inISOPAK2 (Homo sapiens)1624291 PMID:21555521 and PMID:27889207RGDPMID:21555521 and PMID:27889207
Pak2Ratnegative regulation of apoptotic process involved_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratnegative regulation of stress fiber assembly involved_inISOPAK2 (Homo sapiens)1624291 PMID:25753039RGDPMID:25753039
Pak2Ratnegative regulation of stress fiber assembly involved_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratpositive regulation of extrinsic apoptotic signaling pathway involved_inISOPAK2 (Homo sapiens)1624291 PMID:19240112RGDPMID:19240112
Pak2Ratpositive regulation of extrinsic apoptotic signaling pathway involved_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratprotein autophosphorylation acts_upstream_of_or_withinISOPAK2 (Homo sapiens)1624291 PMID:11805089RGDPMID:11805089
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Cellular Component
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Original Reference(s)
Pak2Ratcell-cell junction located_inISOPAK2 (Homo sapiens)1624291 PMID:25753039RGDPMID:25753039
Pak2Ratcell-cell junction located_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
Pak2Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Pak2Ratcytoplasm located_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratcytoplasm is_active_inIBAFB:FBgn0010909 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Pak2Ratcytoplasm located_inISOPAK2 (Homo sapiens)1624291 PMID:25468996RGDPMID:25468996
Pak2Ratcytoplasm is_active_inISOPAK2 (Homo sapiens)1624291 PMID:21555521RGDPMID:21555521
Pak2Ratcytosol located_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratcytosol located_inISOPAK2 (Homo sapiens)1624291 PMID:8625410RGDGO_REF:0000052 and PMID:8625410
Pak2Ratfocal adhesion located_inISOPAK2 (Homo sapiens)1624291 RGDGO_REF:0000052
Pak2Ratfocal adhesion located_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratglutamatergic synapse is_active_inISOPak2 (Mus musculus)1624291 PMID:15182717RGDPMID:15182717
Pak2Ratglutamatergic synapse is_active_inIEAUniProtKB:Q8CIN4 and ensembl:ENSMUSP000000234671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratmembrane located_inIEAUniProtKB-KW:KW-04721600115GO_REF:0000043UniProtGO_REF:0000043
Pak2Ratmembrane located_inIEAUniProtKB-SubCell:SL-01621600115GO_REF:0000044UniProtGO_REF:0000044
Pak2Ratnuclear speck located_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratnuclear speck located_inISOPAK2 (Homo sapiens)1624291 RGDGO_REF:0000052
Pak2Ratnucleoplasm located_inISOPAK2 (Homo sapiens)1624291 RGDGO_REF:0000052
Pak2Ratnucleoplasm located_inIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
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Molecular Function
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Original Reference(s)
Pak2RatATP binding enablesIEAUniProtKB-KW:KW-00671600115GO_REF:0000043UniProtGO_REF:0000043
Pak2RatATP binding enablesIEAInterPro:IPR000719 and InterPro:IPR0174411600115GO_REF:0000002InterProGO_REF:0000002
Pak2RatATP binding enablesIEAUniRule:UR0015033411600115GO_REF:0000104UniProtGO_REF:0000104
Pak2Ratcatalytic activity enablesIEAUniProtKB-KW:KW-00211600115GO_REF:0000043UniProtGO_REF:0000043
Pak2Ratidentical protein binding enablesISOPAK2 (Homo sapiens)1624291UniProtKB:Q13177 and PMID:16837009RGDPMID:16837009
Pak2Ratidentical protein binding enablesIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratkinase activity enablesIEAUniProtKB-KW:KW-04181600115GO_REF:0000043UniProtGO_REF:0000043
Pak2Ratnucleotide binding enablesIEAUniRule:UR0015033411600115GO_REF:0000104UniProtGO_REF:0000104
Pak2Ratnucleotide binding enablesIEAUniProtKB-KW:KW-05471600115GO_REF:0000043UniProtGO_REF:0000043
Pak2Ratprotein binding enablesISOPak2 (Mus musculus)1624291UniProtKB:P42859 more ...RGDPMID:18716323 and PMID:19240112
Pak2Ratprotein binding enablesISOPAK2 (Homo sapiens)1624291UniProtKB:O43639 more ...RGDPMID:10607567 more ...
Pak2Ratprotein kinase activity enablesIEAUniProtKB:Q8CIN4 and ensembl:ENSMUSP000000234671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratprotein kinase activity enablesIEAInterPro:IPR000719 and InterPro:IPR0082711600115GO_REF:0000002InterProGO_REF:0000002
Pak2Ratprotein kinase activity enablesISOPak2 (Mus musculus)1624291 PMID:23509247RGDPMID:23509247
Pak2Ratprotein kinase binding enablesISOPAK2 (Homo sapiens)1624291UniProtKB:P00519 and PMID:11121037RGDPMID:11121037
Pak2Ratprotein kinase binding enablesIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
Pak2Ratprotein serine kinase activity enablesIEARHEA:179891600115GO_REF:0000116RHEAGO_REF:0000116
Pak2Ratprotein serine/threonine kinase activity enablesIEAUniProtKB-KW:KW-07231600115GO_REF:0000043UniProtGO_REF:0000043
Pak2Ratprotein serine/threonine kinase activity enablesIEAEC:2.7.11.11600115GO_REF:0000003UniProtGO_REF:0000003
Pak2Ratprotein serine/threonine kinase activity enablesIEAUniProtKB:Q13177 and ensembl:ENSP000003140671600115GO_REF:0000107EnsemblGO_REF:0000107
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Imported Annotations - KEGG (archival)

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Original Reference(s)
Pak2Ratepidermal growth factor/neuregulin signaling pathway   IEA 6907045 KEGGrno:04012
Pak2Ratmitogen activated protein kinase signaling pathway   IEA 6907045 KEGGrno:04010
Pak2Ratrenal cell carcinoma pathway   IEA 6907045 KEGGrno:05211
Pak2RatT cell receptor signaling pathway  IEA 6907045 KEGGrno:04660

Imported Annotations - PID (archival)

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Original Reference(s)
Pak2Ratvascular endothelial growth factor signaling pathway   ISOPAK2 (Homo sapiens)6484113 PIDPID:200188

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Reference Title
Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. Rat ISS GO annotations from GOA human gene data--August 2006 GOA data from the GO Consortium
3. Expression of mitogen-activated protein kinase pathways during postnatal development of rat heart. Kim SO, etal., J Cell Biochem 1998 Nov 1;71(2):286-301.
4. Identification and validation of new autoantibodies for the diagnosis of DCIS and node negative early-stage breast cancers. Lacombe J, etal., Int J Cancer. 2013 Mar 1;132(5):1105-13. doi: 10.1002/ijc.27766. Epub 2012 Aug 28.
5. A brain serine/threonine protein kinase activated by Cdc42 and Rac1. Manser E, etal., Nature 1994 Jan 6;367(6458):40-6.
6. A novel serine kinase activated by rac1/CDC42Hs-dependent autophosphorylation is related to PAK65 and STE20. Martin GA, etal., EMBO J 1995 May 1;14(9):1970-8.
7. Electronic Transfer of LocusLink and RefSeq Data NCBI rat LocusLink and RefSeq merged data July 26, 2002
8. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
9. PID Annotation Import Pipeline Pipeline to import Pathway Interaction Database annotations from NCI into RGD
10. GOA pipeline RGD automated data pipeline
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. Comprehensive gene review and curation RGD comprehensive gene curation
13. p21-activated protein kinase gamma-PAK in pituitary secretory granules phosphorylates prolactin. Tuazon PT, etal., FEBS Lett. 2002 Mar 27;515(1-3):84-8.
14. A novel player in cellular hypertrophy: Gibetagamma/PI3K-dependent activation of the RacGEF TIAM-1 is required for alpha(1)-adrenoceptor induced hypertrophy in neonatal rat cardiomyocytes. Vettel C, etal., J Mol Cell Cardiol. 2012 Aug;53(2):165-75. doi: 10.1016/j.yjmcc.2012.04.015. Epub 2012 May 4.
15. Imatinib mesylate blocks a non-Smad TGF-beta pathway and reduces renal fibrogenesis in vivo. Wang S, etal., FASEB J. 2005 Jan;19(1):1-11.
16. Cell-type-specific activation of PAK2 by transforming growth factor beta independent of Smad2 and Smad3. Wilkes MC, etal., Mol Cell Biol. 2003 Dec;23(23):8878-89.
17. p21-activated kinases regulate actin remodeling in glomerular podocytes. Zhu J, etal., Am J Physiol Renal Physiol. 2010 Apr;298(4):F951-61. doi: 10.1152/ajprenal.00536.2009. Epub 2010 Jan 13.
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PMID:7592896   PMID:8625410   PMID:10075701   PMID:11121037   PMID:11278486   PMID:11805089   PMID:15182717   PMID:16396499   PMID:16641100   PMID:16837009   PMID:17060906   PMID:17224451  
PMID:19103160   PMID:19240112   PMID:21555521   PMID:22871113   PMID:23509247   PMID:25468996   PMID:25753039   PMID:25979836   PMID:26912410   PMID:28408623   PMID:30620686   PMID:31505169  



Pak2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81182,212,896 - 82,273,803 (+)NCBIGRCr8
mRatBN7.21168,707,940 - 68,768,816 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1168,707,969 - 68,768,816 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1177,545,003 - 77,605,878 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01170,206,629 - 70,267,901 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01169,234,099 - 69,294,967 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01172,829,407 - 72,865,815 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1172,829,238 - 72,865,902 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl1171,959,228 - 72,021,224 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01175,895,329 - 75,939,106 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41170,529,961 - 70,588,511 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11170,587,549 - 70,646,100 (+)NCBI
Celera1168,130,464 - 68,189,144 (+)NCBICelera
Cytogenetic Map11q22NCBI
PAK2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383196,739,857 - 196,832,647 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3196,739,857 - 196,832,647 (+)EnsemblGRCh38hg38GRCh38
GRCh373196,466,728 - 196,559,518 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 363197,951,312 - 198,043,756 (+)NCBINCBI36Build 36hg18NCBI36
Build 343197,955,224 - 198,047,662NCBI
Celera3195,047,767 - 195,144,272 (+)NCBICelera
Cytogenetic Map3q29NCBI
HuRef3193,763,319 - 193,859,670 (+)NCBIHuRef
CHM1_13196,437,954 - 196,530,860 (+)NCBICHM1_1
T2T-CHM13v2.03199,459,234 - 199,558,334 (+)NCBIT2T-CHM13v2.0
Pak2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391631,835,108 - 31,898,160 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1631,835,108 - 31,898,160 (-)EnsemblGRCm39 Ensembl
GRCm381632,016,290 - 32,079,342 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1632,016,290 - 32,079,342 (-)EnsemblGRCm38mm10GRCm38
MGSCv371632,017,949 - 32,079,359 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361631,937,610 - 31,999,020 (-)NCBIMGSCv36mm8
Celera1632,511,700 - 32,575,354 (-)NCBICelera
Cytogenetic Map16B2NCBI
cM Map1622.4NCBI
Pak2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542012,892,845 - 12,930,955 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542012,893,760 - 12,930,955 (+)NCBIChiLan1.0ChiLan1.0
PAK2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22194,609,641 - 194,699,725 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13194,614,360 - 194,704,443 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03194,084,037 - 194,174,010 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13204,023,357 - 204,111,515 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3204,023,357 - 204,111,507 (+)Ensemblpanpan1.1panPan2
PAK2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13329,774,645 - 29,863,661 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3329,774,593 - 29,987,478 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3329,798,837 - 29,887,939 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03330,018,726 - 30,108,342 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3330,018,587 - 30,235,797 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13329,795,936 - 29,906,532 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03329,850,899 - 29,940,690 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03330,473,517 - 30,563,048 (+)NCBIUU_Cfam_GSD_1.0
Pak2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602124,493,276 - 124,572,628 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367841,351,039 - 1,391,992 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367841,351,034 - 1,391,992 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PAK2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13133,273,112 - 133,389,458 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113133,276,122 - 133,383,506 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213142,923,496 - 142,963,953 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PAK2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11590,474,367 - 90,488,814 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1590,398,660 - 90,449,346 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
ChlSab1.1 Ensembl1590,398,660 - 90,449,346 (-)NCBIChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604164,177,811 - 64,268,335 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pak2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473061,817,300 - 61,879,755 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473061,809,876 - 61,879,755 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in Pak2
445 total Variants

Predicted Target Of
Summary Value
Count of predictions:27
Count of miRNA genes:26
Interacting mature miRNAs:27
Transcripts:ENSRNOT00000049862
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 21 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300147Bp187Blood pressure QTL 1873.67arterial blood pressure trait (VT:2000000)blood pressure time series experimental set point of the baroreceptor response (CMO:0002593)11169446234Rat
724554Iddm17Insulin dependent diabetes mellitus QTL 170.001blood glucose amount (VT:0000188)blood glucose level (CMO:0000046)111897620886241447Rat
70208Niddm22Non-insulin dependent diabetes mellitus QTL 223.61blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)115980279482566553Rat
70180BpQTLcluster10Blood pressure QTL cluster 103.19arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)113491804179918041Rat
1581565Pur10Proteinuria QTL 100.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)114480331882846466Rat
4889859Pur28Proteinuria QTL 2819.50.001urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)114545932375190161Rat
634339Niddm50Non-insulin dependent diabetes mellitus QTL 503.32blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)116642214886241447Rat
10755497Bp388Blood pressure QTL 3882.76arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)111945620576331918Rat
1549848Bvd6Brain ventricular dilatation QTL 63.10.0001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)116611332182169223Rat
10058954Gmadr7Adrenal mass QTL 72.490.0049adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)116034659086241447Rat

1 to 10 of 21 rows



alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
2 6 5 20 21 24 6 17 6 51 29 13 8 12 18



Ensembl Acc Id: ENSRNOT00000049862   ⟹   ENSRNOP00000040162
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1168,707,969 - 68,767,873 (+)Ensembl
Rnor_6.0 Ensembl1171,959,228 - 72,017,463 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000071060   ⟹   ENSRNOP00000065949
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
Rnor_6.0 Ensembl1172,829,238 - 72,865,902 (+)Ensembl
Ensembl Acc Id: ENSRNOT00000077269   ⟹   ENSRNOP00000072644
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl1168,730,236 - 68,768,816 (+)Ensembl
Rnor_6.0 Ensembl1171,981,060 - 72,021,224 (+)Ensembl
RefSeq Acc Id: NM_001393703   ⟹   NP_001380632
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81182,212,935 - 82,273,803 (+)NCBI
mRatBN7.21168,707,940 - 68,768,816 (+)NCBI
RefSeq Acc Id: NM_053306   ⟹   NP_445758
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81182,212,935 - 82,273,803 (+)NCBI
mRatBN7.21168,707,940 - 68,768,816 (+)NCBI
Rnor_6.01172,829,407 - 72,865,815 (+)NCBI
Rnor_5.01175,895,329 - 75,939,106 (+)NCBI
RGSC_v3.41170,529,961 - 70,588,511 (+)RGD
Celera1168,130,464 - 68,189,144 (+)RGD
Sequence:
RefSeq Acc Id: XM_063270441   ⟹   XP_063126511
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr81182,212,896 - 82,273,803 (+)NCBI
1 to 11 of 11 rows
Protein RefSeqs NP_001380632 (Get FASTA)   NCBI Sequence Viewer  
  NP_445758 (Get FASTA)   NCBI Sequence Viewer  
  XP_063126511 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA79064 (Get FASTA)   NCBI Sequence Viewer  
  AAB35608 (Get FASTA)   NCBI Sequence Viewer  
  AAF06695 (Get FASTA)   NCBI Sequence Viewer  
  EDM11448 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000040162
  ENSRNOP00000040162.2
  ENSRNOP00000072644
GenBank Protein Q64303 (Get FASTA)   NCBI Sequence Viewer  
1 to 11 of 11 rows
RefSeq Acc Id: NP_445758   ⟸   NM_053306
- UniProtKB: Q64303 (UniProtKB/Swiss-Prot),   Q9QYU0 (UniProtKB/Swiss-Prot),   A6IRU5 (UniProtKB/TrEMBL),   A0A8L2R675 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000065949   ⟸   ENSRNOT00000071060
Ensembl Acc Id: ENSRNOP00000072644   ⟸   ENSRNOT00000077269
Ensembl Acc Id: ENSRNOP00000040162   ⟸   ENSRNOT00000049862
RefSeq Acc Id: NP_001380632   ⟸   NM_001393703
- UniProtKB: Q64303 (UniProtKB/Swiss-Prot),   Q9QYU0 (UniProtKB/Swiss-Prot),   A6IRU5 (UniProtKB/TrEMBL),   A0A8L2R675 (UniProtKB/TrEMBL)
CRIB   Protein kinase

Name Modeler Protein Id AA Range Protein Structure
AF-Q64303-F1-model_v2 AlphaFold Q64303 1-524 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 39 of 39 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-21079 BioCyc
Ensembl Genes ENSRNOG00000001747 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
  ENSRNOG00000048597 Ensembl
Ensembl Transcript ENSRNOT00000049862 ENTREZGENE
  ENSRNOT00000049862.4 UniProtKB/Swiss-Prot
  ENSRNOT00000077269 ENTREZGENE
Gene3D-CATH 3.90.810.10 UniProtKB/Swiss-Prot
  Phosphorylase Kinase, domain 1 UniProtKB/Swiss-Prot
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot
InterPro CRIB_dom UniProtKB/Swiss-Prot
  CRIB_dom_sf UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
  PAK3-like UniProtKB/Swiss-Prot
  PAK_BD UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot
  STK_PAK2 UniProtKB/Swiss-Prot
KEGG Report rno:29432 UniProtKB/Swiss-Prot
NCBI Gene 29432 ENTREZGENE
PANTHER NON-SPECIFIC SERINE_THREONINE PROTEIN KINASE UniProtKB/Swiss-Prot
  SERINE/THREONINE-PROTEIN KINASE SAMKA-RELATED-RELATED UniProtKB/Swiss-Prot
Pfam PBD UniProtKB/Swiss-Prot
  Pkinase UniProtKB/Swiss-Prot
PhenoGen Pak2 PhenoGen
PROSITE CRIB UniProtKB/Swiss-Prot
  PROTEIN_KINASE_ATP UniProtKB/Swiss-Prot
  PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot
RatGTEx ENSRNOG00000001747 RatGTEx
  ENSRNOG00000048597 RatGTEx
SMART PBD UniProtKB/Swiss-Prot
  S_TKc UniProtKB/Swiss-Prot
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot
UniProt A0A8L2R675 ENTREZGENE, UniProtKB/TrEMBL
  A6IRU5 ENTREZGENE, UniProtKB/TrEMBL
  PAK2_RAT UniProtKB/Swiss-Prot, ENTREZGENE
  Q9QYU0 ENTREZGENE
UniProt Secondary Q9QYU0 UniProtKB/Swiss-Prot
1 to 39 of 39 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2021-03-09 Pak2  p21 (RAC1) activated kinase 2  LOC100910732  serine/threonine-protein kinase PAK 2-like  Data merged from RGD:6497075 737654 PROVISIONAL
2017-06-20 Pak2  p21 (RAC1) activated kinase 2  Pak2  p21 protein (Cdc42/Rac)-activated kinase 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2017-03-27 Pak2  p21 protein (Cdc42/Rac)-activated kinase 2  Pak2  p21 (RAC1) activated kinase 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2016-05-12 Pak2  p21 (RAC1) activated kinase 2  Pak2  p21 protein (Cdc42/Rac)-activated kinase 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2012-07-05 LOC100910732  serine/threonine-protein kinase PAK 2-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2009-05-27 Pak2  p21 protein (Cdc42/Rac)-activated kinase 2  Pak2  p21 (CDKN1A)-activated kinase 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2002-06-10 Pak2  p21 (CDKN1A)-activated kinase 2      Symbol and Name status set to approved 70586 APPROVED

Note Type Note Reference
gene_expression expressed in many tissues 61685
gene_expression expressed in many tissues 70317
gene_function phosphorylates protein serine/threonine residues 61685
gene_function phosphorylates protein serine/threonine residues 70317