Ptk2 (protein tyrosine kinase 2) - Rat Genome Database

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Gene: Ptk2 (protein tyrosine kinase 2) Rattus norvegicus
Analyze
Symbol: Ptk2
Name: protein tyrosine kinase 2
RGD ID: 3443
Description: Enables several functions, including identical protein binding activity; integrin binding activity; and phosphatidylinositol 3-kinase binding activity. Involved in several processes, including cellular response to morphine; positive regulation of cell population proliferation; and regulation of cell migration. Located in several cellular components, including basolateral plasma membrane; focal adhesion; and intercalated disc. Is active in glutamatergic synapse and postsynapse. Used to study hepatocellular carcinoma; hypertension; and nephritis. Biomarker of hypertension; ischemia; and uremia. Human ortholog(s) of this gene implicated in leiomyoma; lung small cell carcinoma; and pulmonary hypertension. Orthologous to human PTK2 (protein tyrosine kinase 2); PARTICIPATES IN long term potentiation; integrin mediated signaling pathway; vascular endothelial growth factor signaling pathway; INTERACTS WITH 1-octadec-9-enoylglycero-3-phosphate; 2,3,7,8-tetrachlorodibenzodioxine; 2,4-dinitrotoluene.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: FADK 1; FAK; focal adhesion kinase; focal adhesion kinase 1; focal adhesion kinase-related nonkinase; FRNK; p125FAK; pp125FAK; Protein tyrosine kinase; protein-tyrosine kinase 2; PTK2 protein tyrosine kinase 2
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCr8 - GRCr8 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87107,015,730 - 107,220,865 (-)NCBIGRCr8
mRatBN7.27105,126,725 - 105,331,848 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7105,126,728 - 105,331,783 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7106,875,344 - 107,035,378 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07109,096,927 - 109,256,959 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07109,044,956 - 109,204,985 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07114,436,419 - 114,611,317 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7114,437,361 - 114,590,119 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07114,371,979 - 114,525,553 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47110,933,298 - 111,084,554 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17110,967,527 - 111,118,784 (-)NCBI
Celera7101,534,957 - 101,690,471 (-)NCBICelera
RH 3.4 Map7725.6RGD
Cytogenetic Map7q34NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


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Original Reference(s)
Ptk2RatBreast Neoplasms  ISOPTK2 (Homo sapiens)2292558DNA:amplificationRGD 
Ptk2RatBreast Neoplasms  ISOPTK2 (Homo sapiens)2292559protein:increased expression:breastRGD 
Ptk2Ratcervical cancer disease_progressionISOPTK2 (Homo sapiens)2292556 RGD 
Ptk2Ratcervix carcinoma  ISOPTK2 (Homo sapiens)2292568protein:increased tyrosine phosphorylation:cervixRGD 
Ptk2Ratductal carcinoma in situ  ISOPTK2 (Homo sapiens)2292561protein:increased expression:breastRGD 
Ptk2Ratendometrial carcinoma severityISOPTK2 (Homo sapiens)2292562protein:increased expression:endometriumRGD 
Ptk2Ratendometrial hyperplasia  ISOPTK2 (Homo sapiens)2292562protein:increased expression:endometriumRGD 
Ptk2Ratendometriosis  ISOPTK2 (Homo sapiens)2292555 RGD 
Ptk2RatExperimental Liver Cirrhosis  IEP 2292604mRNA and protein:increased expression:liverRGD 
Ptk2RatExperimental Mammary Neoplasms disease_progressionISOPtk2 (Mus musculus)2292554 RGD 
Ptk2RatExperimental Mammary Neoplasms  IMP 2292560 RGD 
Ptk2Rathepatocellular carcinoma  IMP 2292584 RGD 
Ptk2Rathypertension  IAGP 729831 RGD 
Ptk2Rathypertension  IEP 10041072protein:increased expression:aortaRGD 
Ptk2Ratischemia  IEP 2292577protein:decreased tyrosine phosphorylation:kidneyRGD 
Ptk2RatLeft Ventricular Hypertrophy  IEP 729831associated with Hypertension more ...RGD 
Ptk2Ratleiomyoma  ISOPTK2 (Homo sapiens)2292569 RGD 
Ptk2Ratlung small cell carcinoma  ISOPTK2 (Homo sapiens)13825141DNA:CNV::RGD 
Ptk2Ratlung small cell carcinoma disease_progressionISOPTK2 (Homo sapiens)13825133 RGD 
Ptk2Ratlung squamous cell carcinoma severityISOPTK2 (Homo sapiens)152176664 RGD 
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Ptk2Ratautistic disorder  ISOPTK2 (Homo sapiens)8554872ClinVar Annotator: match by term: AutismClinVarPMID:25741868
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Original Reference(s)
Ptk2Rat(+)-catechin increases phosphorylationISOPTK2 (Homo sapiens)6480464Catechin results in increased phosphorylation of PTK2 proteinCTDPMID:16038899
Ptk2Rat(+)-pilocarpine increases phosphorylationISOPTK2 (Homo sapiens)6480464Pilocarpine results in increased phosphorylation of PTK2 proteinCTDPMID:10537051
Ptk2Rat(+)-pilocarpine multiple interactionsISOPTK2 (Homo sapiens)6480464[Pilocarpine co-treated with wortmannin] results in increased phosphorylation of PTK2 proteinCTDPMID:10537051
Ptk2Rat(-)-epigallocatechin 3-gallate decreases phosphorylationISOPtk2 (Mus musculus)6480464epigallocatechin gallate results in decreased phosphorylation of PTK2 proteinCTDPMID:11746506
Ptk2Rat(-)-epigallocatechin 3-gallate multiple interactionsISOPTK2 (Homo sapiens)6480464[potassium chromate(VI) co-treated with epigallocatechin gallate] results in decreased expression of PTK2 mRNACTDPMID:22079256
Ptk2Rat(S)-nicotine multiple interactionsISOPTK2 (Homo sapiens)6480464[Nicotine co-treated with 4-(N-methyl-N-nitrosamino)-1-(3-pyridyl)-1-butanone] results in increased expression of PTK2 proteinCTDPMID:30259641
Ptk2Rat1,2-dimethylhydrazine multiple interactionsISOPtk2 (Mus musculus)6480464Folic Acid inhibits the reaction [1 and 2-Dimethylhydrazine results in increased expression of PTK2 mRNA]CTDPMID:22206623
Ptk2Rat1,2-dimethylhydrazine increases expressionISOPtk2 (Mus musculus)64804641 and 2-Dimethylhydrazine results in increased expression of PTK2 mRNACTDPMID:22206623
Ptk2Rat1,4-dithiothreitol multiple interactionsISOPTK2 (Homo sapiens)6480464Dithiothreitol affects the reaction [4-cresol sulfate affects the localization of PTK2 protein]CTDPMID:31873818
Ptk2Rat1,8-cineole multiple interactionsISOPtk2 (Mus musculus)6480464Eucalyptol inhibits the reaction [Glucose results in decreased expression of PTK2 protein] and Eucalyptol inhibits the reaction [LEP gene mutant form results in decreased expression of PTK2 protein]CTDPMID:31483951
Ptk2Rat1-octadec-9-enoylglycero-3-phosphate increases phosphorylationISOPtk2 (Mus musculus)6480464lysophosphatidic acid results in increased phosphorylation of PTK2 proteinCTDPMID:11792571
Ptk2Rat1-octadec-9-enoylglycero-3-phosphate multiple interactionsISOPTK2 (Homo sapiens)6480464[wortmannin co-treated with lysophosphatidic acid] results in increased phosphorylation of PTK2 protein more ...CTDPMID:10537051
Ptk2Rat1-octadec-9-enoylglycero-3-phosphate multiple interactionsEXP 6480464[wortmannin co-treated with lysophosphatidic acid] results in increased phosphorylation of PTK2 protein and KNG1 protein inhibits the reaction [[wortmannin co-treated with lysophosphatidic acid] results in increased phosphorylation of PTK2 protein]CTDPMID:10537051
Ptk2Rat1-octadec-9-enoylglycero-3-phosphate increases phosphorylationISOPTK2 (Homo sapiens)6480464lysophosphatidic acid results in increased phosphorylation of PTK2 proteinCTDPMID:10537051
Ptk2Rat1-octadec-9-enoylglycero-3-phosphate increases phosphorylationEXP 6480464lysophosphatidic acid results in increased phosphorylation of PTK2 proteinCTDPMID:10537051
Ptk2Rat17alpha-ethynylestradiol affects expressionISOPtk2 (Mus musculus)6480464Ethinyl Estradiol affects the expression of PTK2 mRNACTDPMID:17555576
Ptk2Rat17alpha-ethynylestradiol multiple interactionsISOPtk2 (Mus musculus)6480464[Tetrachlorodibenzodioxin co-treated with Ethinyl Estradiol] results in increased expression of PTK2 mRNACTDPMID:17942748
Ptk2Rat17beta-estradiol increases phosphorylationISOPTK2 (Homo sapiens)6480464Estradiol results in increased phosphorylation of PTK2 proteinCTDPMID:12421874
Ptk2Rat17beta-estradiol increases expressionISOPtk2 (Mus musculus)6480464Estradiol results in increased expression of PTK2 mRNACTDPMID:39298647
Ptk2Rat17beta-estradiol increases degradationISOPTK2 (Homo sapiens)6480464Estradiol results in increased degradation of PTK2 proteinCTDPMID:24440569

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Biological Process
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Original Reference(s)
Ptk2Ratangiogenesis acts_upstream_of_or_withinISOPtk2 (Mus musculus)1624291MGI:2137691 more ...RGDPMID:15967814
Ptk2Ratangiogenesis involved_inIEAUniProtKB-KW:KW-00371600115GO_REF:0000043UniProtGO_REF:0000043
Ptk2Rataxonogenesis acts_upstream_ofISOPtk2 (Mus musculus)1624291MGI:1857596 PMID:15378065RGDPMID:15378065
Ptk2Ratblood vessel development acts_upstream_of_or_withinISOPtk2 (Mus musculus)1624291MGI:1857596 more ...RGDPMID:12595342 and PMID:15967814
Ptk2Ratcell migration involved_inISOPTK2 (Homo sapiens)1624291 PMID:20305651 and PMID:26934001RGDPMID:20305651 and PMID:26934001
Ptk2Ratcellular response to morphine  IEP 401959306 RGD 
Ptk2Ratcellular response to transforming growth factor beta stimulus acts_upstream_of_or_withinISOPtk2 (Mus musculus)1624291 PMID:21829547RGDPMID:21829547
Ptk2Ratcentral nervous system neuron axonogenesis acts_upstream_of_or_withinISOPtk2 (Mus musculus)1624291MGI:1857596 PMID:15378065RGDPMID:15378065
Ptk2Ratendothelial cell migration acts_upstream_of_or_withinISOPtk2 (Mus musculus)1624291MGI:2137691 more ...RGDPMID:15967814
Ptk2Ratephrin receptor signaling pathway involved_inISSUniProtKB:Q053971600115GO_REF:0000024UniProtGO_REF:0000024
Ptk2Ratephrin receptor signaling pathway involved_inISOPTK2 (Homo sapiens)1624291 PMID:10655584RGDPMID:10655584
Ptk2Ratepidermal growth factor receptor signaling pathway involved_inIBAPANTHER:PTN001975314 and Ptk2b (Rattus norvegicus)1600115GO_REF:0000033GO_CentralGO_REF:0000033
Ptk2Ratextracellular matrix organization acts_upstream_of_or_withinISOPtk2 (Mus musculus)1624291MGI:2684666 PMID:14642275RGDPMID:14642275
Ptk2Ratfat cell differentiation  IEP 2292581 RGD 
Ptk2Ratgrowth hormone receptor signaling pathway involved_inISOPTK2 (Homo sapiens)1624291 PMID:10925297RGDPMID:10925297
Ptk2Ratintegrin-mediated signaling pathway involved_inISOPTK2 (Homo sapiens)1624291 PMID:11331870 and PMID:24036928RGDPMID:11331870 and PMID:24036928
Ptk2Ratintegrin-mediated signaling pathway involved_inISSUniProtKB:Q053971600115GO_REF:0000024UniProtGO_REF:0000024
Ptk2Ratintracellular chloride ion homeostasis  IMP 2292600 RGD 
Ptk2RatJNK cascade  IMP 2292618 RGD 
Ptk2RatMAPK cascade  IMP 2292620 RGD 
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Cellular Component
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Original Reference(s)
Ptk2Ratanchoring junction located_inIEAUniProtKB-KW:KW-09651600115GO_REF:0000043UniProtGO_REF:0000043
Ptk2Ratapical plasma membrane  IDA 1299194 RGD 
Ptk2Ratapical plasma membrane located_inISOPtk2 (Mus musculus)1624291 PMID:10742111RGDPMID:10742111
Ptk2Ratbasolateral plasma membrane  IDA 2292577 RGD 
Ptk2Ratcell cortex located_inIEAUniProtKB-SubCell:SL-01381600115GO_REF:0000044UniProtGO_REF:0000044
Ptk2Ratcell projection located_inIEAUniProtKB-KW:KW-09661600115GO_REF:0000043UniProtGO_REF:0000043
Ptk2Ratcentrosome located_inIEAUniProtKB-SubCell:SL-00481600115GO_REF:0000044UniProtGO_REF:0000044
Ptk2Ratciliary basal body located_inISSUniProtKB:Q053971600115GO_REF:0000024UniProtGO_REF:0000024
Ptk2Ratciliary basal body located_inISOPTK2 (Homo sapiens)1624291 PMID:31630787RGDPMID:31630787
Ptk2Ratcilium located_inISOPTK2 (Homo sapiens) more ...1624291 RGDGO_REF:0000052
Ptk2Ratcytoplasm located_inIEAUniProtKB-KW:KW-09631600115GO_REF:0000043UniProtGO_REF:0000043
Ptk2Ratcytoplasm located_inIEAUniProtKB-SubCell:SL-00861600115GO_REF:0000044UniProtGO_REF:0000044
Ptk2Ratcytoskeleton located_inIEAUniProtKB-KW:KW-02061600115GO_REF:0000043UniProtGO_REF:0000043
Ptk2Ratcytoskeleton located_inIEAUniProtKB-SubCell:SL-00901600115GO_REF:0000044UniProtGO_REF:0000044
Ptk2Ratcytoskeleton located_inIEAInterPro:IPR0002991600115GO_REF:0000002InterProGO_REF:0000002
Ptk2Ratcytosol located_inISOPTK2 (Homo sapiens)1624291 PMID:15855171RGDPMID:15855171
Ptk2Ratcytosol located_inISSUniProtKB:Q053971600115GO_REF:0000024UniProtGO_REF:0000024
Ptk2Ratcytosol located_inISOPTK2 (Homo sapiens) more ...1624291 RGDGO_REF:0000052
Ptk2Ratfocal adhesion  TAS 729733 RGD 
Ptk2Ratfocal adhesion located_inIEAInterPro:IPR005189 and InterPro:IPR0361371600115GO_REF:0000002InterProGO_REF:0000002
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Molecular Function
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Original Reference(s)
Ptk2Ratactin binding enablesISOPTK2 (Homo sapiens)1624291 PMID:16803572RGDPMID:16803572
Ptk2RatATP binding enablesIEAUniProtKB-KW:KW-00671600115GO_REF:0000043UniProtGO_REF:0000043
Ptk2RatATP binding enablesIEAInterPro:IPR000719 and InterPro:IPR0174411600115GO_REF:0000002InterProGO_REF:0000002
Ptk2RatATP binding enablesIEAUniRule:UR0015033411600115GO_REF:0000104UniProtGO_REF:0000104
Ptk2Ratidentical protein binding enablesIPIUniProtKB:O353468693377PMID:24480479IntAct 
Ptk2Ratintegrin binding  IPIItgb1 (Rattus norvegicus)2325674 RGD 
Ptk2Ratintegrin binding enablesISOPTK2 (Homo sapiens)1624291UniProtKB:P05556 and PMID:26763945RGDPMID:26763945
Ptk2Ratintegrin binding  IPIItgb1 (Rattus norvegicus)2325691 RGD 
Ptk2RatJUN kinase binding enablesISOPTK2 (Homo sapiens)1624291 PMID:10925297RGDPMID:10925297
Ptk2Ratkinase activity enablesIEAUniProtKB-KW:KW-04181600115GO_REF:0000043UniProtGO_REF:0000043
Ptk2Ratmolecular function activator activity enablesISOPTK2 (Homo sapiens)1624291 PMID:12467573RGDPMID:12467573
Ptk2Ratnon-membrane spanning protein tyrosine kinase activity enablesISOPtk2 (Mus musculus)1624291 PMID:18297732 and PMID:27994061RGDPMID:18297732 and PMID:27994061
Ptk2Ratnon-membrane spanning protein tyrosine kinase activity enablesIBAMGI:104908 more ...1600115GO_REF:0000033GO_CentralGO_REF:0000033
Ptk2Ratnon-membrane spanning protein tyrosine kinase activity enablesISOPTK2 (Homo sapiens)1624291 PMID:10655584 and PMID:11331870RGDPMID:10655584 and PMID:11331870
Ptk2Ratnon-membrane spanning protein tyrosine kinase activity enablesISSUniProtKB:Q053971600115GO_REF:0000024UniProtGO_REF:0000024
Ptk2Ratnon-membrane spanning protein tyrosine kinase activity enablesIEAEC:2.7.10.21600115GO_REF:0000003UniProtGO_REF:0000003
Ptk2Ratnucleotide binding enablesIEAUniProtKB-KW:KW-05471600115GO_REF:0000043UniProtGO_REF:0000043
Ptk2Ratnucleotide binding enablesIEAUniRule:UR0015033411600115GO_REF:0000104UniProtGO_REF:0000104
Ptk2Ratphosphatase binding  IDA 12801498PtenRGD 
Ptk2Ratphosphatidylinositol 3-kinase binding  IPIPik3r1 (Rattus norvegicus)4108485 RGD 
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RGD Manual Annotations


  
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Original Reference(s)
Ptk2Ratintegrin mediated signaling pathway   ISOPTK2 (Homo sapiens)2300402 RGD 
Ptk2Ratlong term potentiation  IMP 2292620 RGD 
Ptk2Ratvascular endothelial growth factor signaling pathway   ISOPTK2 (Homo sapiens)2298729 RGD 

Imported Annotations - KEGG (archival)

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Original Reference(s)
Ptk2Ratchemokine mediated signaling pathway  IEA 6907045 KEGGrno:04062
Ptk2RatEntamoebiasis pathway  IEA 6907045 KEGGrno:05146
Ptk2Ratepidermal growth factor/neuregulin signaling pathway   IEA 6907045 KEGGrno:04012
Ptk2Ratsmall cell lung carcinoma pathway  IEA 6907045 KEGGrno:05222
Ptk2Ratvascular endothelial growth factor signaling pathway   IEA 6907045 KEGGrno:04370

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Reference Title
Reference Citation
1. Extracellular signal-regulated kinase activation during renal ischemia/reperfusion mediates focal adhesion dissolution and renal injury. Alderliesten M, etal., Am J Pathol. 2007 Aug;171(2):452-62. Epub 2007 Jul 9.
2. A role for enhanced integrin and FAK expression in uremia-induced parathyroid hyperplasia. Arcidiacono MV, etal., J Nephrol. 2007 Mar-Apr;20(2):228-33.
3. Integrin dynamics produce a delayed stage of long-term potentiation and memory consolidation. Babayan AH, etal., J Neurosci. 2012 Sep 12;32(37):12854-61. doi: 10.1523/JNEUROSCI.2024-12.2012.
4. Focal adhesion kinase protein levels in gut epithelial motility. Basson MD, etal., Am J Physiol Gastrointest Liver Physiol. 2006 Sep;291(3):G491-9.
5. Focal adhesion kinase (FAK)-dependent regulation of S-phase kinase-associated protein-2 (Skp-2) stability. A novel mechanism regulating smooth muscle cell proliferation. Bond M, etal., J Biol Chem. 2004 Sep 3;279(36):37304-10. Epub 2004 Jun 18.
6. FAK dimerization controls its kinase-dependent functions at focal adhesions. Brami-Cherrier K, etal., EMBO J. 2014 Feb 18;33(4):356-70. doi: 10.1002/embj.201386399. Epub 2014 Jan 30.
7. Cloning of focal adhesion kinase, pp125FAK, from rat brain reveals multiple transcripts with different patterns of expression. Burgaya F and Girault JA, Brain Res Mol Brain Res 1996 Apr;37(1-2):63-73.
8. The effects of morphine treatment on the NCAM and its signaling in the MLDS of rats. Cao JP, etal., Drug Chem Toxicol. 2016 Oct;39(4):418-23. doi: 10.3109/01480545.2015.1137302. Epub 2016 Jan 28.
9. Integrin beta1 is involved in the signaling of glial cell line-derived neurotrophic factor. Cao JP, etal., J Comp Neurol. 2008 Jul 10;509(2):203-10.
10. Dystrophin Dp71f associates with the beta1-integrin adhesion complex to modulate PC12 cell adhesion. Cerna J, etal., J Mol Biol. 2006 Oct 6;362(5):954-65. Epub 2006 Aug 1.
11. Gonadotropin releasing hormone analogue therapy alters signal transduction pathways involving mitogen-activated protein and focal adhesion kinases in leiomyoma. Chegini N and Kornberg L, J Soc Gynecol Investig. 2003 Jan;10(1):21-6.
12. [Effects of prednisone on renal FAK and Pyk2 expressions in rats with adriamycin- induced nephritis]. Chen X, etal., Nan Fang Yi Ke Da Xue Xue Bao. 2014 Jul;34(8):1149-53.
13. Effects of dexmedetomidine on hippocampal focal adhesion kinase tyrosine phosphorylation in physiologic and ischemic conditions. Dahmani S, etal., Anesthesiology. 2005 Nov;103(5):969-77.
14. Thiopental and isoflurane attenuate the decrease in hippocampal phosphorylated Focal Adhesion Kinase (pp125FAK) content induced by oxygen-glucose deprivation. Dahmani S, etal., Br J Anaesth. 2004 Aug;93(2):270-4. Epub 2004 Jun 11.
15. Lidocaine increases phosphorylation of focal adhesion kinase in rat hippocampal slices. Dahmani S, etal., Eur J Pharmacol. 2004 Apr 5;489(1-2):55-8.
16. Focal adhesion kinase as a RhoA-activable signaling scaffold mediating Akt activation and cardiomyocyte protection. Del Re DP, etal., J Biol Chem. 2008 Dec 19;283(51):35622-9. Epub 2008 Oct 14.
17. Regulation of a neuronal form of focal adhesion kinase by anandamide. Derkinderen P, etal., Science 1996 Sep 20;273(5282):1719-22.
18. Focal adhesion kinase signaling promotes phagocytosis of integrin-bound photoreceptors. Finnemann SC EMBO J 2003 Aug 15;22(16):4143-54.
19. Fibre-type specific concentration of focal adhesion kinase at the sarcolemma: influence of fibre innervation and regeneration. Fluck M, etal., J Exp Biol. 2002 Aug;205(Pt 16):2337-48.
20. Weak expression of focal adhesion kinase (pp125FAK) in patients with cervical cancer is associated with poor disease outcome. Gabriel B, etal., Clin Cancer Res. 2006 Apr 15;12(8):2476-83.
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PMID:2132399   PMID:7529876   PMID:7673154   PMID:8889548   PMID:9038154   PMID:10655584   PMID:10699171   PMID:10742111   PMID:10925297   PMID:11331870   PMID:11513739   PMID:11784865  
PMID:12133485   PMID:12235133   PMID:12391143   PMID:12556538   PMID:12595342   PMID:12651850   PMID:12829427   PMID:12932810   PMID:12941275   PMID:12967635   PMID:14551814   PMID:14642275  
PMID:14676198   PMID:14715243   PMID:14963000   PMID:15077193   PMID:15096502   PMID:15166238   PMID:15172101   PMID:15174102   PMID:15206825   PMID:15287896   PMID:15378065   PMID:15494733  
PMID:15576648   PMID:15591141   PMID:15640164   PMID:15681841   PMID:15728191   PMID:15855171   PMID:15914540   PMID:15923313   PMID:15967814   PMID:16010975   PMID:16095866   PMID:16298995  
PMID:16374517   PMID:16405917   PMID:16803572   PMID:16927379   PMID:17012369   PMID:17088251   PMID:17136425   PMID:17179255   PMID:17240116   PMID:17417603   PMID:17549512   PMID:17583725  
PMID:17868879   PMID:17877062   PMID:17986008   PMID:17999938   PMID:18206965   PMID:18297732   PMID:18539755   PMID:18662671   PMID:18757826   PMID:18773890   PMID:19016591   PMID:19116150  
PMID:19118217   PMID:19141060   PMID:19172391   PMID:19213829   PMID:19224536   PMID:19340459   PMID:19361463   PMID:19372463   PMID:19470773   PMID:19470782   PMID:19484266   PMID:19553453  
PMID:19793767   PMID:19880666   PMID:19912685   PMID:19913511   PMID:20142421   PMID:20705914   PMID:21180139   PMID:21246051   PMID:21412826   PMID:21562308   PMID:21569089   PMID:21660950  
PMID:21703394   PMID:21829547   PMID:21852560   PMID:21921830   PMID:21937583   PMID:22120166   PMID:22227249   PMID:22293597   PMID:22402981   PMID:22778269   PMID:22797892   PMID:22914642  
PMID:23073828   PMID:23168795   PMID:23301073   PMID:23463649   PMID:23574715   PMID:23755149   PMID:23880313   PMID:23904105   PMID:24036928   PMID:24056044   PMID:24169556   PMID:24703506  
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Ptk2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr87107,015,730 - 107,220,865 (-)NCBIGRCr8
mRatBN7.27105,126,725 - 105,331,848 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl7105,126,728 - 105,331,783 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx7106,875,344 - 107,035,378 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.07109,096,927 - 109,256,959 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.07109,044,956 - 109,204,985 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.07114,436,419 - 114,611,317 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl7114,437,361 - 114,590,119 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.07114,371,979 - 114,525,553 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.47110,933,298 - 111,084,554 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.17110,967,527 - 111,118,784 (-)NCBI
Celera7101,534,957 - 101,690,471 (-)NCBICelera
RH 3.4 Map7725.6RGD
Cytogenetic Map7q34NCBI
PTK2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh388140,657,900 - 141,002,079 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl8140,657,900 - 141,002,216 (-)EnsemblGRCh38hg38GRCh38
GRCh378141,667,999 - 142,012,178 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 368141,737,683 - 142,080,514 (-)NCBINCBI36Build 36hg18NCBI36
Build 348141,737,682 - 142,080,514NCBI
Celera8137,836,859 - 138,179,410 (-)NCBICelera
Cytogenetic Map8q24.3NCBI
HuRef8136,979,065 - 137,322,195 (-)NCBIHuRef
CHM1_18141,708,729 - 142,051,666 (-)NCBICHM1_1
T2T-CHM13v2.08141,777,902 - 142,122,150 (-)NCBIT2T-CHM13v2.0
Ptk2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391573,076,951 - 73,297,192 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1573,076,951 - 73,295,129 (-)EnsemblGRCm39 Ensembl
GRCm381573,205,102 - 73,423,820 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1573,205,102 - 73,423,280 (-)EnsemblGRCm38mm10GRCm38
MGSCv371573,035,535 - 73,253,621 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361573,032,362 - 73,221,980 (-)NCBIMGSCv36mm8
Celera1574,705,367 - 74,923,905 (-)NCBICelera
Cytogenetic Map15D3NCBI
cM Map1533.94NCBI
Ptk2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495546114,337,914 - 14,556,931 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495546114,337,914 - 14,622,779 (-)NCBIChiLan1.0ChiLan1.0
PTK2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v27158,052,611 - 158,397,828 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan18133,583,257 - 133,928,558 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v08137,330,777 - 137,677,306 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.18140,412,773 - 140,743,129 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl8140,412,773 - 140,684,898 (-)Ensemblpanpan1.1panPan2
PTK2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11335,302,439 - 35,541,336 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1335,303,380 - 35,541,294 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1335,161,620 - 35,427,478 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01335,687,298 - 35,953,785 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1335,687,298 - 35,953,782 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11335,407,367 - 35,673,847 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01335,497,341 - 35,763,586 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01335,917,116 - 36,183,296 (-)NCBIUU_Cfam_GSD_1.0
Ptk2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244053032,953,767 - 3,152,431 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647010,379,872 - 10,578,543 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647010,379,855 - 10,578,531 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PTK2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl42,656,614 - 2,896,054 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.142,656,606 - 2,896,060 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PTK2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.18134,897,511 - 135,246,300 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660394,888,238 - 5,242,010 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ptk2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473515,461,178 - 15,714,071 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473515,356,911 - 15,713,219 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.

.
Variants in Ptk2
855 total Variants

Predicted Target Of
Summary Value
Count of predictions:293
Count of miRNA genes:179
Interacting mature miRNAs:199
Transcripts:ENSRNOT00000011219
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


1 to 10 of 36 rows
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD ID
Symbol
Name
LOD
P Value
Trait
Sub Trait
Chr
Start
Stop
Species
1300179Kidm5Kidney mass QTL 53.51kidney mass (VT:0002707)left kidney wet weight (CMO:0000083)743747012135012528Rat
1331728Bp214Blood pressure QTL 2142.825arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)780221299124373579Rat
1331731Bp216Blood pressure QTL 2162.851arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)7102297359133492884Rat
2298475Eau6Experimental allergic uveoretinitis QTL 60.0029uvea integrity trait (VT:0010551)experimental autoimmune uveitis score (CMO:0001504)784257275129257275Rat
71114Niddm14Non-insulin dependent diabetes mellitus QTL 144.5blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)784257275129257275Rat
1357336Gluco6Glucose level QTL 63.4blood glucose amount (VT:0000188)serum glucose level (CMO:0000543)794811326116294265Rat
1358361Sradr5Stress Responsive Adrenal Weight QTL 55.55adrenal gland mass (VT:0010420)both adrenal glands wet weight (CMO:0000164)743747012108555253Rat
1357338Stl17Serum triglyceride level QTL 173.23blood triglyceride amount (VT:0002644)serum triglyceride level (CMO:0000360)769736356112729554Rat
631687Hcas1Hepatocarcinoma susceptibility QTL 13.90.001liver integrity trait (VT:0010547)liver tumorous lesion volume to total liver volume ratio (CMO:0001082)791412594129807172Rat
70159Bp61Blood pressure QTL 610.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)7103146217116738842Rat

1 to 10 of 36 rows
RH139110  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27105,165,886 - 105,166,016 (+)MAPPERmRatBN7.2
Rnor_6.07114,479,057 - 114,479,186NCBIRnor6.0
Rnor_5.07114,414,617 - 114,414,746UniSTSRnor5.0
RGSC_v3.47110,972,806 - 110,972,935UniSTSRGSC3.4
Celera7101,574,059 - 101,574,188UniSTS
RH 3.4 Map7722.7UniSTS
Cytogenetic Map7q34UniSTS
Ptk2  
Rat AssemblyChrPosition (strand)SourceJBrowse
RGSC_v3.47110,933,361 - 110,933,513UniSTSRGSC3.4
RGSC_v3.47110,933,379 - 110,933,531UniSTSRGSC3.4
Celera7101,535,033 - 101,535,185UniSTS
Celera7101,535,051 - 101,535,203UniSTS
RH128225  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27105,126,949 - 105,127,162 (+)MAPPERmRatBN7.2
Rnor_6.07114,436,644 - 114,436,856NCBIRnor6.0
Rnor_5.07114,372,204 - 114,372,416UniSTSRnor5.0
RGSC_v3.47110,933,510 - 110,933,722UniSTSRGSC3.4
Celera7101,535,182 - 101,535,394UniSTS
RH 3.4 Map7721.9UniSTS
Cytogenetic Map7q34UniSTS
RH130965  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27105,127,140 - 105,127,327 (+)MAPPERmRatBN7.2
Rnor_6.07114,436,835 - 114,437,021NCBIRnor6.0
Rnor_5.07114,372,395 - 114,372,581UniSTSRnor5.0
RGSC_v3.47110,933,701 - 110,933,887UniSTSRGSC3.4
Celera7101,535,373 - 101,535,559UniSTS
RH 3.4 Map7722.6UniSTS
Cytogenetic Map7q34UniSTS
RH94436  
Rat AssemblyChrPosition (strand)SourceJBrowse
RH 3.4 Map7725.6UniSTS
Cytogenetic Map7q34UniSTS
RH138184  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27105,230,462 - 105,230,635 (+)MAPPERmRatBN7.2
Rnor_6.07114,543,607 - 114,543,779NCBIRnor6.0
Rnor_5.07114,478,952 - 114,479,124UniSTSRnor5.0
RGSC_v3.47111,037,952 - 111,038,124UniSTSRGSC3.4
Celera7101,638,612 - 101,638,784UniSTS
RH 3.4 Map7722.8UniSTS
Cytogenetic Map7q34UniSTS
UniSTS:143067  
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.27105,126,912 - 105,127,571 (+)MAPPERmRatBN7.2
Rnor_6.07114,436,607 - 114,437,265NCBIRnor6.0
Rnor_5.07114,372,167 - 114,372,825UniSTSRnor5.0
RGSC_v3.47110,933,473 - 110,934,131UniSTSRGSC3.4
Celera7101,535,145 - 101,535,803UniSTS
Cytogenetic Map7q34UniSTS
PMC84535P1  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr87107,050,309 - 107,051,293 (+)Marker Load Pipeline
mRatBN7.27105,161,304 - 105,162,290 (+)MAPPERmRatBN7.2
Rnor_6.07114,474,476 - 114,475,460NCBIRnor6.0
Rnor_5.07114,410,036 - 114,411,020UniSTSRnor5.0
RGSC_v3.47110,968,225 - 110,969,209UniSTSRGSC3.4
Celera7101,569,478 - 101,570,462UniSTS
Cytogenetic Map7q34UniSTS
PMC84535P3  
Rat AssemblyChrPosition (strand)SourceJBrowse
GRCr87107,050,347 - 107,051,123 (+)Marker Load Pipeline
mRatBN7.27105,161,342 - 105,162,120 (+)MAPPERmRatBN7.2
Rnor_6.07114,474,514 - 114,475,290NCBIRnor6.0
Rnor_5.07114,410,074 - 114,410,850UniSTSRnor5.0
RGSC_v3.47110,968,263 - 110,969,039UniSTSRGSC3.4
Celera7101,569,516 - 101,570,292UniSTS
Cytogenetic Map7q34UniSTS
Ptk2  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.07114,372,073 - 114,372,225UniSTSRnor5.0
RGSC_v3.47110,933,379 - 110,933,531UniSTSRGSC3.4
Celera7101,535,051 - 101,535,203UniSTS
Cytogenetic Map7q34UniSTS
Ptk2  
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_5.07114,372,055 - 114,372,207UniSTSRnor5.0
RGSC_v3.47110,933,361 - 110,933,513UniSTSRGSC3.4
Celera7101,535,033 - 101,535,185UniSTS
Cytogenetic Map7q34UniSTS




alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
renal system
reproductive system
respiratory system
9 11 49 113 91 90 59 25 59 6 218 97 93 45 60 31


1 to 30 of 35 rows
RefSeq Transcripts NM_013081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017594678 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078475 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078477 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_039078480 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263055 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263056 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063263059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005486550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010052943 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF020777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF020779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI717382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA508631 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA511845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB713440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH473950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 30 of 35 rows

Ensembl Acc Id: ENSRNOT00000011219   ⟹   ENSRNOP00000011219
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7105,126,956 - 105,331,763 (-)Ensembl
Rnor_6.0 Ensembl7114,437,361 - 114,573,900 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000079599   ⟹   ENSRNOP00000075518
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7105,126,728 - 105,283,089 (-)Ensembl
Rnor_6.0 Ensembl7114,440,949 - 114,590,119 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000095017   ⟹   ENSRNOP00000085395
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7105,126,728 - 105,283,089 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000101944   ⟹   ENSRNOP00000089674
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7105,126,956 - 105,331,763 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000109226   ⟹   ENSRNOP00000080431
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7105,126,956 - 105,331,763 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000110466   ⟹   ENSRNOP00000093819
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7105,243,450 - 105,331,783 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000112145   ⟹   ENSRNOP00000095122
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7105,126,728 - 105,283,089 (-)Ensembl
Ensembl Acc Id: ENSRNOT00000113790   ⟹   ENSRNOP00000092163
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl7105,126,956 - 105,331,763 (-)Ensembl
RefSeq Acc Id: NM_013081   ⟹   NP_037213
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,730 - 107,172,091 (-)NCBI
mRatBN7.27105,126,725 - 105,283,089 (-)NCBI
Rnor_6.07114,436,419 - 114,590,208 (-)NCBI
Rnor_5.07114,371,979 - 114,525,553 (-)NCBI
RGSC_v3.47110,933,298 - 111,084,554 (-)RGD
Celera7101,534,957 - 101,690,471 (-)NCBI
Sequence:
RefSeq Acc Id: XM_039078475   ⟹   XP_038934403
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,172,005 (-)NCBI
mRatBN7.27105,126,725 - 105,283,003 (-)NCBI
RefSeq Acc Id: XM_039078477   ⟹   XP_038934405
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,172,005 (-)NCBI
mRatBN7.27105,126,725 - 105,283,003 (-)NCBI
RefSeq Acc Id: XM_039078480   ⟹   XP_038934408
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,172,005 (-)NCBI
mRatBN7.27105,126,725 - 105,283,003 (-)NCBI
RefSeq Acc Id: XM_063263043   ⟹   XP_063119113
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,220,862 (-)NCBI
RefSeq Acc Id: XM_063263044   ⟹   XP_063119114
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,220,586 (-)NCBI
RefSeq Acc Id: XM_063263045   ⟹   XP_063119115
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,220,862 (-)NCBI
RefSeq Acc Id: XM_063263046   ⟹   XP_063119116
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,220,586 (-)NCBI
RefSeq Acc Id: XM_063263047   ⟹   XP_063119117
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,220,862 (-)NCBI
RefSeq Acc Id: XM_063263048   ⟹   XP_063119118
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,220,862 (-)NCBI
RefSeq Acc Id: XM_063263049   ⟹   XP_063119119
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,220,857 (-)NCBI
RefSeq Acc Id: XM_063263050   ⟹   XP_063119120
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,220,862 (-)NCBI
RefSeq Acc Id: XM_063263051   ⟹   XP_063119121
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,220,862 (-)NCBI
RefSeq Acc Id: XM_063263052   ⟹   XP_063119122
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,220,856 (-)NCBI
RefSeq Acc Id: XM_063263054   ⟹   XP_063119124
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,220,855 (-)NCBI
RefSeq Acc Id: XM_063263055   ⟹   XP_063119125
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,033,181 - 107,220,862 (-)NCBI
RefSeq Acc Id: XM_063263056   ⟹   XP_063119126
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,044,587 - 107,172,005 (-)NCBI
RefSeq Acc Id: XM_063263057   ⟹   XP_063119127
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,089,135 (-)NCBI
RefSeq Acc Id: XM_063263058   ⟹   XP_063119128
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,063,664 (-)NCBI
RefSeq Acc Id: XM_063263059   ⟹   XP_063119129
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,015,959 - 107,050,982 (-)NCBI
RefSeq Acc Id: XR_005486550
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,050,015 - 107,220,865 (-)NCBI
mRatBN7.27105,161,026 - 105,331,809 (-)NCBI
RefSeq Acc Id: XR_010052943
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr87107,044,517 - 107,220,865 (-)NCBI
1 to 30 of 32 rows
Protein RefSeqs NP_037213 (Get FASTA)   NCBI Sequence Viewer  
  XP_038934403 (Get FASTA)   NCBI Sequence Viewer  
  XP_038934405 (Get FASTA)   NCBI Sequence Viewer  
  XP_038934408 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119113 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119114 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119115 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119116 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119117 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119118 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119119 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119120 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119121 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119122 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119124 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119125 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119126 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119127 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119128 (Get FASTA)   NCBI Sequence Viewer  
  XP_063119129 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA86278 (Get FASTA)   NCBI Sequence Viewer  
  AAA86279 (Get FASTA)   NCBI Sequence Viewer  
  AAA86280 (Get FASTA)   NCBI Sequence Viewer  
  AAB72203 (Get FASTA)   NCBI Sequence Viewer  
  EDM16117 (Get FASTA)   NCBI Sequence Viewer  
  EDM16118 (Get FASTA)   NCBI Sequence Viewer  
  EDM16119 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSRNOP00000075518
  ENSRNOP00000089674
  ENSRNOP00000092163
1 to 30 of 32 rows
1 to 5 of 28 rows
1 to 5 of 28 rows
RefSeq Acc Id: NP_037213   ⟸   NM_013081
- UniProtKB: Q62900 (UniProtKB/Swiss-Prot),   O35346 (UniProtKB/Swiss-Prot),   A0A8L2Q4U8 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSRNOP00000075518   ⟸   ENSRNOT00000079599
Ensembl Acc Id: ENSRNOP00000011219   ⟸   ENSRNOT00000011219
RefSeq Acc Id: XP_038934408   ⟸   XM_039078480
- Peptide Label: isoform X4
- UniProtKB: A0A8I6A3T3 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038934405   ⟸   XM_039078477
- Peptide Label: isoform X3
- UniProtKB: A0A8I6A3T3 (UniProtKB/TrEMBL)
FERM   Protein kinase

Name Modeler Protein Id AA Range Protein Structure
AF-O35346-F1-model_v2 AlphaFold O35346 1-1055 view protein structure


eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen



1 to 40 of 69 rows
Database
Acc Id
Source(s)
BioCyc Gene G2FUF-33063 BioCyc
Ensembl Genes ENSRNOG00000007916 Ensembl, ENTREZGENE
Ensembl Transcript ENSRNOT00000079599 ENTREZGENE
  ENSRNOT00000101944 ENTREZGENE
  ENSRNOT00000112145 ENTREZGENE
  ENSRNOT00000113790 ENTREZGENE
Gene3D-CATH 1.20.80.10 UniProtKB/Swiss-Prot
  2.30.29.30 UniProtKB/Swiss-Prot
  Nucleotidyltransferases domain 2 UniProtKB/Swiss-Prot
  Phosphatidylinositol 3-kinase Catalytic Subunit, Chain A, domain 1 UniProtKB/Swiss-Prot
  Phosphorylase Kinase, domain 1 UniProtKB/Swiss-Prot
  Single helix bin UniProtKB/Swiss-Prot
  Transferase(Phosphotransferase) domain 1 UniProtKB/Swiss-Prot
InterPro Band_41_domain UniProtKB/Swiss-Prot
  FADK_N UniProtKB/Swiss-Prot
  FAK1-like_FERM_C UniProtKB/Swiss-Prot
  FAK1/PYK2_FERM_C UniProtKB/Swiss-Prot
  FERM/acyl-CoA-bd_prot_sf UniProtKB/Swiss-Prot
  FERM_2 UniProtKB/Swiss-Prot
  FERM_central UniProtKB/Swiss-Prot
  FERM_domain UniProtKB/Swiss-Prot
  Focal_adhe_kin_target_dom_sf UniProtKB/Swiss-Prot
  Focal_adhesion_kin_target_dom UniProtKB/Swiss-Prot
  Kinase-like_dom_sf UniProtKB/Swiss-Prot
  PH-like_dom_sf UniProtKB/Swiss-Prot
  Prot_kinase_dom UniProtKB/Swiss-Prot
  Protein_kinase_ATP_BS UniProtKB/Swiss-Prot
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/Swiss-Prot
  Tyr_kinase_AS UniProtKB/Swiss-Prot
  Tyr_kinase_cat_dom UniProtKB/Swiss-Prot
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot
KEGG Report rno:25614 UniProtKB/Swiss-Prot
NCBI Gene 25614 ENTREZGENE
PANTHER FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER UniProtKB/Swiss-Prot
  NON-SPECIFIC PROTEIN-TYROSINE KINASE UniProtKB/Swiss-Prot
Pfam FERM_C_FAK1 UniProtKB/Swiss-Prot
  FERM_M UniProtKB/Swiss-Prot
  FERM_N_2 UniProtKB/Swiss-Prot
  Focal_AT UniProtKB/Swiss-Prot
  Pkinase_Tyr UniProtKB/Swiss-Prot
1 to 40 of 69 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-02-28 Ptk2  protein tyrosine kinase 2  Ptk2  PTK2 protein tyrosine kinase 2  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2004-09-10 Ptk2  PTK2 protein tyrosine kinase 2    protein tyrosine kinase 2  Name updated 1299863 APPROVED
2002-06-10 Ptk2  Protein tyrosine kinase      Symbol and Name status set to approved 70586 APPROVED