Usp37 (ubiquitin specific peptidase 37) - Rat Genome Database

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Gene: Usp37 (ubiquitin specific peptidase 37) Rattus norvegicus
Analyze
Symbol: Usp37
Name: ubiquitin specific peptidase 37
RGD ID: 2319715
Description: Predicted to enable cysteine-type deubiquitinase activity; cysteine-type endopeptidase activity; and protein kinase binding activity. Predicted to be involved in G1/S transition of mitotic cell cycle and regulation of DNA replication. Predicted to be active in cytosol and nucleus. Orthologous to human USP37 (ubiquitin specific peptidase 37); INTERACTS WITH genistein; gentamycin; paracetamol.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: LOC100361658; LOC316522; ubiquitin carboxyl-terminal hydrolase 37; ubiquitin specific peptidase 37-like; ubiquitin specific protease 37
RGD Orthologs
Human
Mouse
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8983,467,966 - 83,567,848 (-)NCBIGRCr8
mRatBN7.2976,018,863 - 76,118,732 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl976,018,991 - 76,084,044 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0981,717,626 - 81,818,421 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl981,716,876 - 81,772,851 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0981,482,175 - 81,574,117 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4973,779,925 - 73,880,023 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1973,927,184 - 73,978,150 (-)NCBI
Celera973,592,141 - 73,691,991 (-)NCBICelera
Cytogenetic Map9q33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (IBA)
nucleus  (IBA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, etal., Brief Bioinform. 2011 Sep;12(5):449-62. doi: 10.1093/bib/bbr042. Epub 2011 Aug 27.
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:14715245   PMID:21596315   PMID:27296872  


Genomics

Comparative Map Data
Usp37
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8983,467,966 - 83,567,848 (-)NCBIGRCr8
mRatBN7.2976,018,863 - 76,118,732 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl976,018,991 - 76,084,044 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0981,717,626 - 81,818,421 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl981,716,876 - 81,772,851 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0981,482,175 - 81,574,117 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4973,779,925 - 73,880,023 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1973,927,184 - 73,978,150 (-)NCBI
Celera973,592,141 - 73,691,991 (-)NCBICelera
Cytogenetic Map9q33NCBI
USP37
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382218,450,251 - 218,568,351 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2218,450,251 - 218,568,351 (-)EnsemblGRCh38hg38GRCh38
GRCh372219,314,974 - 219,433,074 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362219,023,218 - 219,141,293 (-)NCBINCBI36Build 36hg18NCBI36
Build 342219,140,478 - 219,258,554NCBI
Celera2213,081,582 - 213,200,867 (-)NCBICelera
Cytogenetic Map2q35NCBI
HuRef2211,167,863 - 211,286,173 (-)NCBIHuRef
CHM1_12219,321,587 - 219,440,080 (-)NCBICHM1_1
T2T-CHM13v2.02218,936,363 - 219,054,921 (-)NCBIT2T-CHM13v2.0
Usp37
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39174,474,669 - 74,583,447 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl174,474,670 - 74,583,443 (-)EnsemblGRCm39 Ensembl
GRCm38174,435,510 - 74,544,286 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl174,435,511 - 74,544,284 (-)EnsemblGRCm38mm10GRCm38
MGSCv37174,482,084 - 74,590,860 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36174,372,319 - 74,477,493 (-)NCBIMGSCv36mm8
Celera174,993,166 - 75,101,814 (-)NCBICelera
Cytogenetic Map1C3- C4NCBI
cM Map138.54NCBI
Usp37
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545314,846,044 - 14,931,336 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495545314,846,044 - 14,931,336 (+)NCBIChiLan1.0ChiLan1.0
USP37
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v213121,080,895 - 121,200,080 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B121,095,860 - 121,215,045 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B105,708,070 - 105,826,435 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B224,304,520 - 224,422,647 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B224,304,520 - 224,422,228 (-)Ensemblpanpan1.1panPan2
USP37
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13725,090,702 - 25,186,503 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3725,090,702 - 25,186,503 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3725,910,572 - 26,006,406 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03725,106,515 - 25,202,430 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3725,106,515 - 25,202,423 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13725,011,984 - 25,107,360 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03724,945,445 - 25,041,545 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03724,965,635 - 25,061,740 (-)NCBIUU_Cfam_GSD_1.0
Usp37
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303174,596,366 - 174,680,151 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936569943,760 - 1,022,956 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936569939,147 - 1,022,920 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
USP37
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15120,493,739 - 120,590,216 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115120,492,552 - 120,590,230 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215133,508,194 - 133,605,015 (-)NCBISscrofa10.2Sscrofa10.2susScr3
USP37
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.110104,348,220 - 104,473,046 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl10104,352,863 - 104,473,066 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604094,933,778 - 95,056,245 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Usp37
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248236,484,772 - 6,562,990 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248236,484,732 - 6,567,285 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Usp37
344 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:167
Count of miRNA genes:86
Interacting mature miRNAs:94
Transcripts:ENSRNOT00000032706, ENSRNOT00000032719
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
61352Bp34Blood pressure QTL 345arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94249534379271511Rat
61385Edpm9Estrogen-dependent pituitary mass QTL 93.430.05pituitary gland mass (VT:0010496)pituitary gland wet weight (CMO:0000853)963869687108869687Rat
70186Niddm26Non-insulin dependent diabetes mellitus QTL 263.87blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)92207116986369743Rat
70218Cm28Cardiac mass QTL 288.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)92526804479271759Rat
724515Uae16Urinary albumin excretion QTL 168urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)958163035100929646Rat
724544Uae9Urinary albumin excretion QTL 94.5urine albumin amount (VT:0002871)urine albumin level (CMO:0000130)925268044114175309Rat
731164Uae25Urinary albumin excretion QTL 253.50.0001urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)925661188100929786Rat
631656Bp108Blood pressure QTL 1085.970.0001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94859825193598251Rat
731171Glom6Glomerulus QTL 62.80.0003kidney glomerulus morphology trait (VT:0005325)count of superficial glomeruli not directly contacting the kidney surface (CMO:0001002)964573531109573531Rat
1300134Bp185Blood pressure QTL 1853.73arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)961381434104821652Rat
1354626Bvd1Brain ventricular dilatation QTL 13.730.001brain ventricle morphology trait (VT:0000822)hydrocephalus severity score (CMO:0001881)975712843111552878Rat
1581580Uae34Urinary albumin excretion QTL 34urine albumin amount (VT:0002871)urine albumin excretion rate (CMO:0000757)96207227596470995Rat
1598834Memor11Memory QTL 112.5exploratory behavior trait (VT:0010471)average horizontal distance between subject and target during voluntary locomotion in an experimental apparatus (CMO:0002674)93696235977814038Rat
1578757Pur6Proteinuria QTL 63.30.005urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)96207227596470995Rat
1578760Cm53Cardiac mass QTL 533.30.0001heart mass (VT:0007028)heart wet weight (CMO:0000069)956771635101771635Rat
2290450Scl57Serum cholesterol level QTL 574.15blood cholesterol amount (VT:0000180)plasma total cholesterol level (CMO:0000585)93696235995410867Rat
2303170Bp332Blood pressure QTL 3323.730.027arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95584784177026453Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)mean arterial blood pressure (CMO:0000009)95662771378595166Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)diastolic blood pressure (CMO:0000005)95662771378595166Rat
2303180Bp333Blood pressure QTL 3330.001arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)95662771378595166Rat
6903941Pur31Proteinuria QTL 310.036urine total protein amount (VT:0000032)urine protein excretion rate (CMO:0000759)94019418885194188Rat
7207814Bmd91Bone mineral density QTL 913.5femur size trait (VT:1000369)femoral neck cross-sectional area (CMO:0001697)92375414483851531Rat
7411656Foco26Food consumption QTL 269.80.001eating behavior trait (VT:0001431)feed conversion ratio (CMO:0001312)93253550577535505Rat
7411571Bw138Body weight QTL 13814.30.001body mass (VT:0001259)body weight gain (CMO:0000420)93253550577535505Rat
8662828Vetf6Vascular elastic tissue fragility QTL 63.9artery integrity trait (VT:0010639)patent ductus arteriosus score (CMO:0002566)93696235992058970Rat
11353957Bmd92Bone mineral density QTL 920.01tibia mineral mass (VT:1000283)volumetric bone mineral density (CMO:0001553)94611419991114199Rat
11353949Bp393Blood pressure QTL 393arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94019418885194188Rat
11353951Bp394Blood pressure QTL 394arterial blood pressure trait (VT:2000000)systolic blood pressure (CMO:0000004)94464992189649921Rat
10054125Srcrt7Stress Responsive Cort QTL 73.330.0011blood corticosterone amount (VT:0005345)plasma corticosterone level (CMO:0001173)9187073594Rat
10058949Gmadr5Adrenal mass QTL 520.014adrenal gland mass (VT:0010420)both adrenal glands wet weight to body weight ratio (CMO:0002411)94279151387976209Rat
12879506Pur33Proteinuria QTL 33urine total protein amount (VT:0000032)urine total protein excretion rate (CMO:0000756)94464992189649921Rat


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system appendage
High
Medium 3 26 32 16 18 16 1 1 74 24 41 10 1
Low 17 25 25 1 25 7 10 11 1 7
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001427671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006226880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006226881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006226882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006226883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006226884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006245292 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006245293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006245294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006245295 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006245296 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008758059 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_008767307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266500 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266502 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266503 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266505 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063266507 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_237289 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JAXUCZ010000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSRNOT00000032719   ⟹   ENSRNOP00000033308
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl976,018,991 - 76,084,044 (-)Ensembl
Rnor_6.0 Ensembl981,716,876 - 81,772,851 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000107297   ⟹   ENSRNOP00000095391
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl976,018,991 - 76,084,044 (-)Ensembl
RefSeq Acc Id: ENSRNOT00000108626   ⟹   ENSRNOP00000089348
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
mRatBN7.2 Ensembl976,019,387 - 76,084,044 (-)Ensembl
RefSeq Acc Id: NM_001427671   ⟹   NP_001414600
RefSeq Status: VALIDATED
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,533,172 (-)NCBI
RefSeq Acc Id: XM_006245292   ⟹   XP_006245354
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,533,222 (-)NCBI
mRatBN7.2976,018,863 - 76,084,115 (-)NCBI
Rnor_6.0981,717,626 - 81,783,196 (-)NCBI
Rnor_5.0981,482,175 - 81,574,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006245293   ⟹   XP_006245355
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,567,777 (-)NCBI
mRatBN7.2976,018,863 - 76,109,403 (-)NCBI
Rnor_6.0981,717,626 - 81,810,209 (-)NCBI
Rnor_5.0981,482,175 - 81,574,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006245294   ⟹   XP_006245356
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,532,979 (-)NCBI
mRatBN7.2976,018,863 - 76,083,873 (-)NCBI
Rnor_6.0981,717,626 - 81,777,953 (-)NCBI
Rnor_5.0981,482,175 - 81,574,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006245295   ⟹   XP_006245357
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,533,224 (-)NCBI
mRatBN7.2976,018,863 - 76,084,117 (-)NCBI
Rnor_6.0981,717,626 - 81,783,196 (-)NCBI
Rnor_5.0981,482,175 - 81,574,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006245296   ⟹   XP_006245358
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,533,223 (-)NCBI
mRatBN7.2976,018,863 - 76,084,116 (-)NCBI
Rnor_6.0981,717,626 - 81,783,196 (-)NCBI
Rnor_5.0981,482,175 - 81,574,117 (-)NCBI
Sequence:
RefSeq Acc Id: XM_008767307   ⟹   XP_008765529
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,567,848 (-)NCBI
mRatBN7.2976,018,863 - 76,118,732 (-)NCBI
Rnor_6.0981,717,626 - 81,818,421 (-)NCBI
Sequence:
RefSeq Acc Id: XM_063266500   ⟹   XP_063122570
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,533,481 (-)NCBI
RefSeq Acc Id: XM_063266501   ⟹   XP_063122571
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,567,848 (-)NCBI
RefSeq Acc Id: XM_063266502   ⟹   XP_063122572
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,533,225 (-)NCBI
RefSeq Acc Id: XM_063266503   ⟹   XP_063122573
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,567,848 (-)NCBI
RefSeq Acc Id: XM_063266504   ⟹   XP_063122574
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,532,979 (-)NCBI
RefSeq Acc Id: XM_063266505   ⟹   XP_063122575
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,533,227 (-)NCBI
RefSeq Acc Id: XM_063266506   ⟹   XP_063122576
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,533,228 (-)NCBI
RefSeq Acc Id: XM_063266507   ⟹   XP_063122577
Type: CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8983,467,966 - 83,567,848 (-)NCBI
RefSeq Acc Id: XP_006245355   ⟸   XM_006245293
- Peptide Label: isoform X1
- UniProtKB: D4ABE5 (UniProtKB/TrEMBL),   A0A8I6GH62 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006245358   ⟸   XM_006245296
- Peptide Label: isoform X4
- UniProtKB: A0A8I6B2I8 (UniProtKB/TrEMBL),   A0A8I6GH62 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006245357   ⟸   XM_006245295
- Peptide Label: isoform X2
- UniProtKB: A0A8I6GH62 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006245354   ⟸   XM_006245292
- Peptide Label: isoform X1
- UniProtKB: D4ABE5 (UniProtKB/TrEMBL),   A0A8I6GH62 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006245356   ⟸   XM_006245294
- Peptide Label: isoform X1
- UniProtKB: D4ABE5 (UniProtKB/TrEMBL),   A0A8I6GH62 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008765529   ⟸   XM_008767307
- Peptide Label: isoform X1
- UniProtKB: D4ABE5 (UniProtKB/TrEMBL),   A0A8I6GH62 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSRNOP00000033308   ⟸   ENSRNOT00000032719
RefSeq Acc Id: ENSRNOP00000089348   ⟸   ENSRNOT00000108626
RefSeq Acc Id: ENSRNOP00000095391   ⟸   ENSRNOT00000107297
RefSeq Acc Id: XP_063122577   ⟸   XM_063266507
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063122573   ⟸   XM_063266503
- Peptide Label: isoform X4
RefSeq Acc Id: XP_063122571   ⟸   XM_063266501
- Peptide Label: isoform X2
RefSeq Acc Id: XP_063122570   ⟸   XM_063266500
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063122576   ⟸   XM_063266506
- Peptide Label: isoform X6
RefSeq Acc Id: XP_063122575   ⟸   XM_063266505
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063122572   ⟸   XM_063266502
- Peptide Label: isoform X3
RefSeq Acc Id: NP_001414600   ⟸   NM_001427671
RefSeq Acc Id: XP_063122574   ⟸   XM_063266504
- Peptide Label: isoform X4
Protein Domains
USP

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-D4ABE5-F1-model_v2 AlphaFold D4ABE5 1-979 view protein structure

Transcriptome

eQTL   View at Phenogen
WGCNA   View at Phenogen
Tissue/Strain Expression   View at Phenogen


Additional Information

Database Acc Id Source(s)
AGR Gene RGD:2319715 AgrOrtholog
BioCyc Gene G2FUF-27131 BioCyc
Ensembl Genes ENSRNOG00000022720 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSRNOT00000032719.4 UniProtKB/TrEMBL
  ENSRNOT00000107297.1 UniProtKB/TrEMBL
  ENSRNOT00000108626.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.180 UniProtKB/TrEMBL
  Cysteine proteinases UniProtKB/TrEMBL
InterPro Papain_like_cys_pep_sf UniProtKB/TrEMBL
  Pept_C19ubi-hydrolase_C_CS UniProtKB/TrEMBL
  Peptidase_C19 UniProtKB/TrEMBL
  Ubiquitin-int_motif UniProtKB/TrEMBL
  UCH/PAN2 UniProtKB/TrEMBL
  UCH_N UniProtKB/TrEMBL
  USP37-like_PH_sf UniProtKB/TrEMBL
KEGG Report rno:100361658 UniProtKB/TrEMBL
NCBI Gene 100361658 ENTREZGENE
PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE UniProtKB/TrEMBL
Pfam UCH UniProtKB/TrEMBL
  UCH_N UniProtKB/TrEMBL
  UIM UniProtKB/TrEMBL
PhenoGen Usp37 PhenoGen
PROSITE UCH_2_1 UniProtKB/TrEMBL
  UCH_2_2 UniProtKB/TrEMBL
  UCH_2_3 UniProtKB/TrEMBL
  UIM UniProtKB/TrEMBL
RatGTEx ENSRNOG00000022720 RatGTEx
SMART UIM UniProtKB/TrEMBL
Superfamily-SCOP SSF54001 UniProtKB/TrEMBL
UniProt A0A8I6B2I8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I6GH62 ENTREZGENE, UniProtKB/TrEMBL
  D4ABE5 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-08-22 LOC100361658  ubiquitin specific peptidase 37-like  Usp37  ubiquitin specific protease 37  Data merged from RGD:1306972 737654 APPROVED
2012-08-22 Usp37  ubiquitin specific peptidase 37  LOC100361658  ubiquitin specific peptidase 37-like  Nomenclature updated to reflect human and mouse nomenclature 1299863 APPROVED
2010-05-05 LOC100361658  ubiquitin specific peptidase 37-like      Symbol and Name status set to provisional 70820 PROVISIONAL
2008-04-30 Usp37  ubiquitin specific protease 37   Usp37_predicted  ubiquitin specific protease 37 (predicted)  'predicted' is removed 2292626 APPROVED
2005-01-12 Usp37_predicted  ubiquitin specific protease 37 (predicted)      Symbol and Name status set to approved 70820 APPROVED