Symbol:
Usp43
Name:
ubiquitin specific peptidase 43
RGD ID:
2303824
Description:
Predicted to enable cysteine-type deubiquitinase activity. Predicted to be involved in protein deubiquitination and proteolysis. Orthologous to human USP43 (ubiquitin specific peptidase 43); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acetamide.
Type:
protein-coding
RefSeq Status:
VALIDATED
Previously known as:
ubiquitin carboxyl-terminal hydrolase 43; ubiquitin specific protease 43
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
GRCr8 - GRCr8 Assembly
Position:
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 53,047,368 - 53,110,099 (-) NCBI GRCr8 mRatBN7.2 10 52,549,200 - 52,611,168 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 52,548,963 - 52,611,533 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 57,217,546 - 57,279,931 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 56,706,555 - 56,768,942 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 52,205,582 - 52,267,722 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 54,406,980 - 54,467,956 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 54,406,980 - 54,467,956 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 54,153,291 - 54,213,556 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 54,591,669 - 54,653,842 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 10 51,729,378 - 51,789,193 (-) NCBI Celera Cytogenetic Map 10 q24 NCBI
JBrowse:
View Region in Genome Browser (JBrowse)
Model
Only show annotations with direct experimental evidence (0 objects hidden)
Usp43 Rat 1,2-dimethylhydrazine increases expression ISO Usp43 (Mus musculus) 6480464 1 and 2-Dimethylhydrazine results in increased expression of USP43 mRNA CTD PMID:22206623 Usp43 Rat 2,2',4,4',5,5'-hexachlorobiphenyl multiple interactions ISO Usp43 (Mus musculus) 6480464 [2 more ... CTD PMID:25510870 Usp43 Rat 2,2',5,5'-tetrachlorobiphenyl multiple interactions ISO Usp43 (Mus musculus) 6480464 [2 more ... CTD PMID:25510870 Usp43 Rat 2,3,7,8-tetrachlorodibenzodioxine affects expression ISO Usp43 (Mus musculus) 6480464 Tetrachlorodibenzodioxin affects the expression of USP43 mRNA CTD PMID:26377647 Usp43 Rat 2,3,7,8-tetrachlorodibenzodioxine decreases expression EXP 6480464 Tetrachlorodibenzodioxin results in decreased expression of USP43 mRNA CTD PMID:32109520 and PMID:33387578 Usp43 Rat 6-propyl-2-thiouracil increases expression EXP 6480464 Propylthiouracil results in increased expression of USP43 mRNA CTD PMID:24780913 Usp43 Rat 6-propyl-2-thiouracil decreases expression EXP 6480464 Propylthiouracil results in decreased expression of USP43 mRNA CTD PMID:25825206 Usp43 Rat acetamide increases expression EXP 6480464 acetamide results in increased expression of USP43 mRNA CTD PMID:31881176 Usp43 Rat aflatoxin B1 affects expression ISO USP43 (Homo sapiens) 6480464 Aflatoxin B1 affects the expression of USP43 protein CTD PMID:20106945 Usp43 Rat aflatoxin B1 decreases expression ISO USP43 (Homo sapiens) 6480464 Aflatoxin B1 results in decreased expression of USP43 mRNA CTD PMID:22100608 Usp43 Rat aflatoxin B1 increases expression ISO Usp43 (Mus musculus) 6480464 Aflatoxin B1 results in increased expression of USP43 mRNA CTD PMID:19770486 Usp43 Rat aristolochic acid A increases expression ISO USP43 (Homo sapiens) 6480464 aristolochic acid I results in increased expression of USP43 mRNA CTD PMID:33212167 Usp43 Rat arsane affects methylation ISO USP43 (Homo sapiens) 6480464 Arsenic affects the methylation of USP43 gene CTD PMID:25304211 Usp43 Rat arsenic atom affects methylation ISO USP43 (Homo sapiens) 6480464 Arsenic affects the methylation of USP43 gene CTD PMID:25304211 Usp43 Rat benzo[a]pyrene increases methylation ISO Usp43 (Mus musculus) 6480464 Benzo(a)pyrene results in increased methylation of USP43 promoter CTD PMID:27901495 Usp43 Rat benzo[a]pyrene decreases expression ISO USP43 (Homo sapiens) 6480464 Benzo(a)pyrene results in decreased expression of USP43 mRNA CTD PMID:32234424 Usp43 Rat beta-lapachone decreases expression ISO USP43 (Homo sapiens) 6480464 beta-lapachone results in decreased expression of USP43 mRNA CTD PMID:38218311 Usp43 Rat bis(2-ethylhexyl) phthalate increases expression ISO USP43 (Homo sapiens) 6480464 Diethylhexyl Phthalate results in increased expression of USP43 mRNA CTD PMID:31163220 Usp43 Rat bisphenol A decreases expression EXP 6480464 bisphenol A results in decreased expression of USP43 mRNA CTD PMID:25181051 more ... Usp43 Rat bisphenol A decreases methylation ISO USP43 (Homo sapiens) 6480464 bisphenol A results in decreased methylation of USP43 gene CTD PMID:31601247 Usp43 Rat bisphenol A increases methylation EXP 6480464 bisphenol A results in increased methylation of USP43 gene CTD PMID:28505145 Usp43 Rat caffeine decreases phosphorylation ISO USP43 (Homo sapiens) 6480464 Caffeine results in decreased phosphorylation of USP43 protein CTD PMID:35688186 Usp43 Rat CGP 52608 multiple interactions ISO USP43 (Homo sapiens) 6480464 CGP 52608 promotes the reaction [RORA protein binds to USP43 gene] CTD PMID:28238834 Usp43 Rat chloroprene increases expression ISO Usp43 (Mus musculus) 6480464 Chloroprene results in increased expression of USP43 mRNA CTD PMID:23125180 Usp43 Rat choline multiple interactions ISO Usp43 (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of USP43 gene CTD PMID:20938992 Usp43 Rat cisplatin multiple interactions ISO USP43 (Homo sapiens) 6480464 [Cisplatin co-treated with jinfukang] results in decreased expression of USP43 mRNA CTD PMID:27392435 Usp43 Rat clothianidin decreases expression ISO USP43 (Homo sapiens) 6480464 clothianidin results in decreased expression of USP43 mRNA CTD PMID:31626844 Usp43 Rat cyclosporin A affects expression ISO USP43 (Homo sapiens) 6480464 Cyclosporine affects the expression of USP43 mRNA CTD PMID:20106945 Usp43 Rat decabromodiphenyl ether increases expression EXP 6480464 decabromobiphenyl ether results in increased expression of USP43 mRNA CTD PMID:23914054 Usp43 Rat dorsomorphin multiple interactions ISO USP43 (Homo sapiens) 6480464 [NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ... CTD PMID:27188386 Usp43 Rat endosulfan affects expression EXP 6480464 Endosulfan affects the expression of USP43 mRNA CTD PMID:29391264 Usp43 Rat entinostat increases expression ISO USP43 (Homo sapiens) 6480464 entinostat results in increased expression of USP43 mRNA CTD PMID:26272509 Usp43 Rat entinostat multiple interactions ISO USP43 (Homo sapiens) 6480464 [NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of USP43 mRNA CTD PMID:27188386 Usp43 Rat ethanol affects expression ISO Usp43 (Mus musculus) 6480464 Ethanol affects the expression of USP43 mRNA CTD PMID:30319688 Usp43 Rat folic acid multiple interactions ISO Usp43 (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of USP43 gene CTD PMID:20938992 Usp43 Rat gentamycin decreases expression EXP 6480464 Gentamicins results in decreased expression of USP43 mRNA CTD PMID:33387578 Usp43 Rat inulin multiple interactions ISO Usp43 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Inulin] results in decreased expression of USP43 mRNA CTD PMID:36331819 Usp43 Rat ketamine decreases expression EXP 6480464 Ketamine results in decreased expression of USP43 mRNA CTD PMID:20080153 Usp43 Rat L-methionine multiple interactions ISO Usp43 (Mus musculus) 6480464 [Methionine deficiency co-treated with Choline deficiency co-treated with Folic Acid deficiency] results in decreased methylation of USP43 gene CTD PMID:20938992 Usp43 Rat leflunomide increases expression ISO USP43 (Homo sapiens) 6480464 leflunomide results in increased expression of USP43 mRNA CTD PMID:28988120 Usp43 Rat manganese(II) chloride increases expression EXP 6480464 manganese chloride results in increased expression of USP43 mRNA CTD PMID:28801915 Usp43 Rat mercury dibromide multiple interactions ISO USP43 (Homo sapiens) 6480464 [NOG protein co-treated with mercuric bromide co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of USP43 mRNA CTD PMID:27188386 Usp43 Rat N,N-diethyl-m-toluamide multiple interactions EXP 6480464 [Permethrin co-treated with DEET] results in increased methylation of USP43 gene CTD PMID:33148267 Usp43 Rat ozone multiple interactions ISO Usp43 (Mus musculus) 6480464 [Air Pollutants results in increased abundance of [Ozone co-treated with Soot]] which results in increased expression of USP43 mRNA CTD PMID:34911549 Usp43 Rat p-chloromercuribenzoic acid increases expression ISO USP43 (Homo sapiens) 6480464 p-Chloromercuribenzoic Acid results in increased expression of USP43 mRNA CTD PMID:26272509 Usp43 Rat p-chloromercuribenzoic acid multiple interactions ISO USP43 (Homo sapiens) 6480464 [NOG protein co-treated with p-Chloromercuribenzoic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of USP43 mRNA CTD PMID:27188386 Usp43 Rat panobinostat multiple interactions ISO USP43 (Homo sapiens) 6480464 [NOG protein co-treated with Panobinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of USP43 mRNA CTD PMID:27188386 Usp43 Rat paracetamol decreases expression ISO USP43 (Homo sapiens) 6480464 Acetaminophen results in decreased expression of USP43 mRNA CTD PMID:29067470 Usp43 Rat paracetamol decreases expression EXP 6480464 Acetaminophen results in decreased expression of USP43 mRNA CTD PMID:33387578 Usp43 Rat PCB138 multiple interactions ISO Usp43 (Mus musculus) 6480464 [2 more ... CTD PMID:25510870 Usp43 Rat perfluorooctane-1-sulfonic acid multiple interactions ISO Usp43 (Mus musculus) 6480464 [perfluorooctane sulfonic acid co-treated with Inulin] results in decreased expression of USP43 mRNA CTD PMID:36331819 Usp43 Rat permethrin multiple interactions EXP 6480464 [Permethrin co-treated with DEET] results in increased methylation of USP43 gene CTD PMID:33148267 Usp43 Rat phenylmercury acetate increases expression ISO USP43 (Homo sapiens) 6480464 Phenylmercuric Acetate results in increased expression of USP43 mRNA CTD PMID:26272509 Usp43 Rat phenylmercury acetate multiple interactions ISO USP43 (Homo sapiens) 6480464 [NOG protein co-treated with Phenylmercuric Acetate co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of USP43 mRNA CTD PMID:27188386 Usp43 Rat pirinixic acid multiple interactions ISO Usp43 (Mus musculus) 6480464 [pirinixic acid binds to and results in increased activity of PPARA protein] which results in decreased expression of USP43 mRNA CTD PMID:19710929 Usp43 Rat quercetin decreases expression ISO USP43 (Homo sapiens) 6480464 Quercetin results in decreased expression of USP43 mRNA CTD PMID:21632981 Usp43 Rat quinolin-8-ol decreases expression ISO USP43 (Homo sapiens) 6480464 Oxyquinoline results in decreased expression of USP43 mRNA CTD PMID:21632981 Usp43 Rat SB 431542 multiple interactions ISO USP43 (Homo sapiens) 6480464 [NOG protein co-treated with entinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 more ... CTD PMID:27188386 Usp43 Rat sodium arsenite decreases expression ISO Usp43 (Mus musculus) 6480464 sodium arsenite results in decreased expression of USP43 mRNA CTD PMID:37682722 Usp43 Rat sodium dodecyl sulfate increases expression ISO USP43 (Homo sapiens) 6480464 Sodium Dodecyl Sulfate results in increased expression of USP43 mRNA CTD PMID:31734321 Usp43 Rat sulforaphane decreases expression ISO USP43 (Homo sapiens) 6480464 sulforaphane results in decreased expression of USP43 mRNA CTD PMID:31838189 Usp43 Rat tetrachloromethane increases expression EXP 6480464 Carbon Tetrachloride results in increased expression of USP43 mRNA CTD PMID:31150632 Usp43 Rat thioacetamide increases expression EXP 6480464 Thioacetamide results in increased expression of USP43 mRNA CTD PMID:23411599 Usp43 Rat titanium dioxide increases expression ISO Usp43 (Mus musculus) 6480464 titanium dioxide results in increased expression of USP43 mRNA CTD PMID:29264374 Usp43 Rat titanium dioxide decreases methylation ISO Usp43 (Mus musculus) 6480464 titanium dioxide results in decreased methylation of USP43 gene and titanium dioxide results in decreased methylation of USP43 promoter CTD PMID:35295148 Usp43 Rat tributylstannane increases expression ISO Usp43 (Mus musculus) 6480464 tributyltin results in increased expression of USP43 mRNA CTD PMID:31939706 Usp43 Rat trichloroethene decreases expression EXP 6480464 Trichloroethylene results in decreased expression of USP43 mRNA CTD PMID:33387578 Usp43 Rat triptonide decreases expression ISO Usp43 (Mus musculus) 6480464 triptonide results in decreased expression of USP43 mRNA CTD PMID:33045310 Usp43 Rat valproic acid increases expression ISO USP43 (Homo sapiens) 6480464 Valproic Acid results in increased expression of USP43 mRNA CTD PMID:23179753 more ... Usp43 Rat valproic acid multiple interactions ISO USP43 (Homo sapiens) 6480464 [NOG protein co-treated with Valproic Acid co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of USP43 mRNA CTD PMID:27188386 Usp43 Rat vinclozolin increases methylation EXP 6480464 vinclozolin results in increased methylation of USP43 gene CTD PMID:31079544 Usp43 Rat vorinostat increases expression ISO USP43 (Homo sapiens) 6480464 vorinostat results in increased expression of USP43 mRNA CTD PMID:26272509 Usp43 Rat vorinostat multiple interactions ISO USP43 (Homo sapiens) 6480464 [NOG protein co-treated with Vorinostat co-treated with dorsomorphin co-treated with 4-(5-benzo(1 and 3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide] results in increased expression of USP43 mRNA CTD PMID:27188386
1,2-dimethylhydrazine (ISO) 2,2',4,4',5,5'-hexachlorobiphenyl (ISO) 2,2',5,5'-tetrachlorobiphenyl (ISO) 2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO) 6-propyl-2-thiouracil (EXP) acetamide (EXP) aflatoxin B1 (ISO) aristolochic acid A (ISO) arsane (ISO) arsenic atom (ISO) benzo[a]pyrene (ISO) beta-lapachone (ISO) bis(2-ethylhexyl) phthalate (ISO) bisphenol A (EXP,ISO) caffeine (ISO) CGP 52608 (ISO) chloroprene (ISO) choline (ISO) cisplatin (ISO) clothianidin (ISO) cyclosporin A (ISO) decabromodiphenyl ether (EXP) dorsomorphin (ISO) endosulfan (EXP) entinostat (ISO) ethanol (ISO) folic acid (ISO) gentamycin (EXP) inulin (ISO) ketamine (EXP) L-methionine (ISO) leflunomide (ISO) manganese(II) chloride (EXP) mercury dibromide (ISO) N,N-diethyl-m-toluamide (EXP) ozone (ISO) p-chloromercuribenzoic acid (ISO) panobinostat (ISO) paracetamol (EXP,ISO) PCB138 (ISO) perfluorooctane-1-sulfonic acid (ISO) permethrin (EXP) phenylmercury acetate (ISO) pirinixic acid (ISO) quercetin (ISO) quinolin-8-ol (ISO) SB 431542 (ISO) sodium arsenite (ISO) sodium dodecyl sulfate (ISO) sulforaphane (ISO) tetrachloromethane (EXP) thioacetamide (EXP) titanium dioxide (ISO) tributylstannane (ISO) trichloroethene (EXP) triptonide (ISO) valproic acid (ISO) vinclozolin (EXP) vorinostat (ISO)
Usp43 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 10 53,047,368 - 53,110,099 (-) NCBI GRCr8 mRatBN7.2 10 52,549,200 - 52,611,168 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 10 52,548,963 - 52,611,533 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 10 57,217,546 - 57,279,931 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 10 56,706,555 - 56,768,942 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 10 52,205,582 - 52,267,722 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 10 54,406,980 - 54,467,956 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 10 54,406,980 - 54,467,956 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 10 54,153,291 - 54,213,556 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 10 54,591,669 - 54,653,842 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 10 51,729,378 - 51,789,193 (-) NCBI Celera Cytogenetic Map 10 q24 NCBI
USP43 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 17 9,645,260 - 9,729,687 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 17 9,644,698 - 9,729,687 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 17 9,548,834 - 9,633,004 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 17 9,489,675 - 9,573,729 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Celera 17 9,581,209 - 9,665,448 (+) NCBI Celera Cytogenetic Map 17 p13.1 NCBI HuRef 17 9,449,765 - 9,533,827 (+) NCBI HuRef CHM1_1 17 9,559,106 - 9,643,235 (+) NCBI CHM1_1 T2T-CHM13v2.0 17 9,552,990 - 9,637,424 (+) NCBI T2T-CHM13v2.0
Usp43 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 11 67,745,349 - 67,812,979 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 11 67,745,349 - 67,812,979 (-) Ensembl GRCm39 Ensembl GRCm38 11 67,854,523 - 67,922,153 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 11 67,854,523 - 67,922,153 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 11 67,668,025 - 67,735,655 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 11 67,670,721 - 67,738,185 (-) NCBI MGSCv36 mm8 Celera 11 74,798,281 - 74,860,275 (-) NCBI Celera Cytogenetic Map 11 B3 NCBI cM Map 11 41.13 NCBI
Usp43 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955467 7,393,133 - 7,458,849 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955467 7,392,393 - 7,458,852 (-) NCBI ChiLan1.0 ChiLan1.0
USP43 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 19 64,021,442 - 64,107,448 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 17 68,831,222 - 68,915,662 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 17 41,927,406 - 42,012,712 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 17 46,670,551 - 46,755,722 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 17 46,671,245 - 46,753,915 (-) Ensembl panpan1.1 panPan2
USP43 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 34,136,066 - 34,186,593 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 34,135,252 - 34,186,591 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 34,272,304 - 34,322,645 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 34,240,207 - 34,290,610 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 34,240,207 - 34,290,606 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 34,206,149 - 34,256,452 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 34,163,904 - 34,214,530 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 34,344,421 - 34,395,013 (+) NCBI UU_Cfam_GSD_1.0
Usp43 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405602 49,156,660 - 49,230,910 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936595 2,631,714 - 2,704,356 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936595 2,631,589 - 2,704,903 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
USP43 Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 12 54,584,343 - 54,641,116 (+) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 12 54,584,386 - 54,643,921 (+) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 12 57,342,309 - 57,399,795 (+) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
USP43 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 16 9,002,297 - 9,084,408 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 16 9,002,594 - 9,083,711 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666059 12,257,633 - 12,340,788 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Usp43
.
Predicted Target Of
Count of predictions: 197 Count of miRNA genes: 146 Interacting mature miRNAs: 159 Transcripts: ENSRNOT00000065383 Prediction methods: Microtar, Miranda, Rnahybrid, Targetscan Result types: miRGate_prediction
61441 Btemp1 Thermal response to stress QTL 1 4 body temperature trait (VT:0005535) core body temperature (CMO:0001036) 10 35392457 63642539 Rat 1549846 Scl47 Serum cholesterol level QTL 47 3.6 blood cholesterol amount (VT:0000180) serum total cholesterol level (CMO:0000363) 10 50574707 95574707 Rat 9589136 Insul27 Insulin level QTL 27 10.46 0.001 blood insulin amount (VT:0001560) plasma insulin level (CMO:0000342) 10 11474010 56474010 Rat 152025229 Scl83 Serum cholesterol level QTL 83 4.33 blood cholesterol amount (VT:0000180) 10 35710580 68663659 Rat 1578779 Tcas10 Tongue tumor susceptibility QTL 10 3.12 tongue integrity trait (VT:0010553) number of squamous cell tumors of the tongue with diameter greater than 3 mm (CMO:0001950) 10 31297439 76297439 Rat 152025227 Bw195 Body weight QTL 195 5.73 body mass (VT:0001259) 10 46989699 68663659 Rat 631564 Apr3 Acute phase response QTL 3 3.9 blood interleukin-6 amount (VT:0008595) plasma interleukin-6 level (CMO:0001927) 10 15275955 60275955 Rat 1298069 Bp168 Blood pressure QTL 168 5.5 blood pressure trait (VT:0000183) systolic blood pressure (CMO:0000004) 10 26521957 98003205 Rat 2293669 Bmd33 Bone mineral density QTL 33 4.5 0.0001 femur strength trait (VT:0010010) femoral neck polar moment of inertia (CMO:0001670) 10 49444551 81709989 Rat 152025224 Bw193 Body weight QTL 193 6.47 body mass (VT:0001259) 10 51663405 75085664 Rat 631552 Vetf2 Vascular elastic tissue fragility QTL 2 4.5 0.0002 aorta elastic tissue integrity trait (VT:0010556) artery internal elastic lamina non-tumorous lesion count (CMO:0001913) 10 41142633 86142633 Rat 631554 Bp133 Blood pressure QTL 133 0.005 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 743364 63851208 Rat 631557 Bp136 Blood pressure QTL 136 0.003 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 30632053 75632053 Rat 61325 Aia5 Adjuvant induced arthritis QTL 5 0.01 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 23444813 104060283 Rat 1298078 Stresp5 Stress response QTL 5 2.99 0.00025 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 10 42045676 104670812 Rat 2293679 Bmd30 Bone mineral density QTL 30 3.5 0.0001 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 10 49444551 81709989 Rat 1578762 Toxo1 Toxoplasma gondii resistance QTL 1 brain integrity trait (VT:0010579) percentage of study population displaying Toxoplasma gondii brain cysts at a point in time (CMO:0002028) 10 52200030 59378278 Rat 2298544 Neuinf9 Neuroinflammation QTL 9 4.6 nervous system integrity trait (VT:0010566) spinal cord complement component 1, q subcomponent, B chain mRNA level (CMO:0002126) 10 5801990 62146030 Rat 61463 Bp12 Blood pressure QTL 12 6.3 0.0001 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 41333258 86333258 Rat 8694173 Bw149 Body weight QTL 149 4.38 0.001 body mass (VT:0001259) body weight gain (CMO:0000420) 10 44441699 89441699 Rat 2300218 Hpcl2 Hepatic cholesterol level QTL 2 liver cholesterol amount (VT:0010498) liver cholesterol level (CMO:0001597) 10 45029650 95600334 Rat 1554317 Bmd4 Bone mineral density QTL 4 9.4 0.0001 lumbar vertebra mineral mass (VT:0010511) volumetric bone mineral density (CMO:0001553) 10 19816042 99406971 Rat 1598852 Anxrr19 Anxiety related response QTL 19 5.07 body movement coordination trait (VT:0005424) number of rearing movements in an experimental apparatus (CMO:0001752) 10 18167841 63167841 Rat 1581497 Esta1 Estrogen-induced thymic atrophy QTL 1 thymus mass (VT:0004954) thymus wet weight (CMO:0000855) 10 21329805 61345413 Rat 724527 Bp148 Blood pressure QTL 148 0.0001 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 28453136 73453136 Rat 1358897 Stresp6 Stress response QTL 6 4.17 0.022 blood norepinephrine amount (VT:0005663) plasma norepinephrine level (CMO:0001010) 10 35392267 64155584 Rat 1331762 Rf40 Renal function QTL 40 3.873 kidney blood vessel physiology trait (VT:0100012) absolute change in renal vascular resistance (CMO:0001900) 10 29299504 64155584 Rat 2300171 Bmd58 Bone mineral density QTL 58 4.9 0.0001 lumbar vertebra mineral mass (VT:0010511) volumetric bone mineral density (CMO:0001553) 10 26944628 71944628 Rat 61354 Pia10 Pristane induced arthritis QTL 10 0.01 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 23444813 104060283 Rat 2301967 Cm73 Cardiac mass QTL 73 4.55 heart left ventricle mass (VT:0007031) heart left ventricle weight to body weight ratio (CMO:0000530) 10 14487011 89062041 Rat 2303118 Mamtr7 Mammary tumor resistance QTL 7 0.003 mammary gland integrity trait (VT:0010552) mammary tumor growth rate (CMO:0000344) 10 9658275 104670812 Rat 70188 BpQTLcluster1 Blood pressure QTL cluster 1 4.864 arterial blood pressure trait (VT:2000000) pulse pressure (CMO:0000292) 1 42323132 87323132 Rat 9590310 Scort19 Serum corticosterone level QTL 19 6.3 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 10 11474010 56474010 Rat 9589030 Epfw9 Epididymal fat weight QTL 9 19.24 0.001 epididymal fat pad mass (VT:0010421) epididymal fat pad weight to body weight ratio (CMO:0000658) 10 44441699 89441699 Rat 10402859 Bp381 Blood pressure QTL 381 0.002 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 27606468 72606468 Rat 2316949 Gluco60 Glucose level QTL 60 3.7 blood glucose amount (VT:0000188) blood glucose level (CMO:0000046) 10 14487011 107057807 Rat 2293652 Bmd22 Bone mineral density QTL 22 4.9 0.0001 femur mineral mass (VT:0010011) total volumetric bone mineral density (CMO:0001728) 10 49444551 81709989 Rat 70198 BpQTLcluster9 Blood pressure QTL cluster 9 2.94 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 42323132 87323132 Rat 1359017 Hrtrt21 Heart rate QTL 21 2.4 heart pumping trait (VT:2000009) heart rate (CMO:0000002) 10 51772940 96772940 Rat 6893352 Bw100 Body weight QTL 100 0.33 0.6 body mass (VT:0001259) body weight (CMO:0000012) 1 15906665 60906665 Rat 724556 Pur2 Proteinuria QTL 2 5.5 urine protein amount (VT:0005160) urine protein level (CMO:0000591) 10 22427500 90627625 Rat 8662860 Vetf10 Vascular elastic tissue fragility QTL 10 artery integrity trait (VT:0010639) number of ruptures of the internal elastic lamina of the abdominal aorta and iliac arteries (CMO:0002562) 10 6154182 73453136 Rat 61387 Bp1 Blood pressure QTL 1 5.1 arterial blood pressure trait (VT:2000000) diastolic blood pressure (CMO:0000005) 10 51770177 107211142 Rat 70223 Bp57 Blood pressure QTL 57 5 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 1 80676123 Rat 1354587 Kidm21 Kidney mass QTL 21 3.3 kidney mass (VT:0002707) right kidney wet weight (CMO:0000082) 10 15028513 60430477 Rat 6893350 Bw99 Body weight QTL 99 0.87 0.16 body mass (VT:0001259) body weight (CMO:0000012) 1 15906665 60906665 Rat 2317043 Aia7 Adjuvant induced arthritis QTL 7 3.82 joint integrity trait (VT:0010548) left rear ankle joint diameter (CMO:0002149) 10 37565079 82565079 Rat 70224 Eae3 Experimental allergic encephalomyelitis QTL 3 4.1 nervous system integrity trait (VT:0010566) experimental autoimmune encephalomyelitis incidence/prevalence measurement (CMO:0001046) 10 26521957 61345413 Rat 2317042 Aia20 Adjuvant induced arthritis QTL 20 3.38 joint integrity trait (VT:0010548) right rear ankle joint diameter (CMO:0002150) 10 37565079 82565079 Rat 1331791 Cm31 Cardiac mass QTL 31 3.84606 heart mass (VT:0007028) heart wet weight (CMO:0000069) 10 29299504 107211142 Rat 2313087 Bmd80 Bone mineral density QTL 80 3.2 0.0001 tibia mineral mass (VT:1000283) total volumetric bone mineral density (CMO:0001728) 10 19606483 64606483 Rat 70364 Bp72 Blood pressure QTL 72 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 51121100 96121100 Rat 631530 Tls3 T-lymphoma susceptibility QTL 3 0 0.0001 thymus integrity trait (VT:0010555) percentage of study population developing T-cell lymphomas during a period of time (CMO:0001911) 10 51774612 95600334 Rat 631535 Cm51 Cardiac mass QTL 51 3 heart mass (VT:0007028) calculated heart weight (CMO:0000073) 10 51786282 91669536 Rat 1576319 Cia29 Collagen induced arthritis QTL 29 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 33973921 78973921 Rat 8552805 Bw145 Body weight QTL 145 2.2 body mass (VT:0001259) change in body weight to body weight ratio (CMO:0002216) 10 41944526 78307017 Rat 631267 Cia20 Collagen induced arthritis QTL 20 3.2 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 23444813 104060283 Rat 2293705 Bmd25 Bone mineral density QTL 25 7.1 0.0001 femur mineral mass (VT:0010011) compact volumetric bone mineral density (CMO:0001730) 10 49444551 81709989 Rat 1576308 Schws1 Schwannoma susceptibility QTL 1 0.0041 nervous system integrity trait (VT:0010566) percentage of study population developing trigeminal nerve neurilemmomas during a period of time (CMO:0002017) 10 40035094 102359817 Rat 631269 Cia22 Collagen induced arthritis QTL 22 8.9 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 40035094 104060283 Rat 631268 Cia21 Collagen induced arthritis QTL 21 3.1 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 14487011 104060283 Rat 9590268 Scort13 Serum corticosterone level QTL 13 3.26 0.001 blood corticosterone amount (VT:0005345) plasma corticosterone level (CMO:0001173) 10 11474010 56474010 Rat 7207811 Bmd90 Bone mineral density QTL 90 5.2 femur size trait (VT:1000369) femoral neck cross-sectional area (CMO:0001697) 10 49444551 81709989 Rat 1576311 Pia26 Pristane induced arthritis QTL 26 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 31224026 75632053 Rat 631270 Cia23 Collagen induced arthritis QTL 23 3.9 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 40035094 104060283 Rat 7411614 Foco18 Food consumption QTL 18 0.001 eating behavior trait (VT:0001431) feed conversion ratio (CMO:0001312) 10 44441699 89441699 Rat 631547 Bp87 Blood pressure QTL 87 4.5 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 47369470 92369470 Rat 61427 Cia16 Collagen induced arthritis QTL 16 3.2 joint integrity trait (VT:0010548) joint inflammation composite score (CMO:0000919) 10 6357896 96121100 Rat 6893342 Cm78 Cardiac mass QTL 78 0.1 0.88 heart mass (VT:0007028) heart weight to body weight ratio (CMO:0000074) 10 42876766 79813922 Rat 2292441 Bp308 Blood pressure QTL 308 arterial blood pressure trait (VT:2000000) mean arterial blood pressure (CMO:0000009) 10 27606468 72606468 Rat 2313055 Bw96 Body weight QTL 96 3.6 0.0001 body mass (VT:0001259) body weight (CMO:0000012) 10 19606483 64606483 Rat 631542 Bp82 Blood pressure QTL 82 6.8 arterial blood pressure trait (VT:2000000) systolic blood pressure (CMO:0000004) 10 26521957 98952741 Rat
D10Mgh24
Rat Assembly Chr Position (strand) Source JBrowse GRCr8 10 53,094,676 - 53,094,798 (+) Marker Load Pipeline mRatBN7.2 10 52,595,744 - 52,595,866 (+) MAPPER mRatBN7.2 Rnor_6.0 10 54,452,824 - 54,452,945 NCBI Rnor6.0 Rnor_5.0 10 54,198,992 - 54,199,113 UniSTS Rnor5.0 RGSC_v3.4 10 54,638,646 - 54,638,768 RGD RGSC3.4 RGSC_v3.4 10 54,638,647 - 54,638,768 UniSTS RGSC3.4 RGSC_v3.1 10 54,652,270 - 54,652,391 RGD Celera 10 51,774,051 - 51,774,172 UniSTS RH 3.4 Map 10 583.9 UniSTS RH 3.4 Map 10 583.9 RGD Cytogenetic Map 10 q24 UniSTS
RH130401
Rat Assembly Chr Position (strand) Source JBrowse mRatBN7.2 10 52,612,551 - 52,612,736 (+) MAPPER mRatBN7.2 Rnor_6.0 10 54,469,625 - 54,469,809 NCBI Rnor6.0 Rnor_5.0 10 54,215,225 - 54,215,409 UniSTS Rnor5.0 RGSC_v3.4 10 54,656,244 - 54,656,428 UniSTS RGSC3.4 Celera 10 51,790,861 - 51,791,045 UniSTS RH 3.4 Map 10 581.2 UniSTS Cytogenetic Map 10 q24 UniSTS
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
9
11
49
113
90
89
58
25
58
6
217
97
93
45
60
31
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSRNOT00000065383 ⟹ ENSRNOP00000062751
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source mRatBN7.2 Ensembl 10 52,548,963 - 52,611,533 (-) Ensembl Rnor_6.0 Ensembl 10 54,406,980 - 54,467,956 (-) Ensembl
RefSeq Acc Id:
NM_001396024 ⟹ NP_001382953
RefSeq Status:
VALIDATED
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 10 53,048,158 - 53,110,099 (-) NCBI mRatBN7.2 10 52,549,218 - 52,611,168 (-) NCBI
RefSeq Acc Id:
XM_039084979 ⟹ XP_038940907
Type:
CODING
Position:
Rat Assembly Chr Position (strand) Source GRCr8 10 53,047,368 - 53,109,981 (-) NCBI mRatBN7.2 10 52,549,200 - 52,611,084 (-) NCBI
Ensembl Acc Id:
ENSRNOP00000062751 ⟸ ENSRNOT00000065383
RefSeq Acc Id:
XP_038940907 ⟸ XM_039084979
- Peptide Label:
isoform X1
- UniProtKB:
D3ZED6 (UniProtKB/TrEMBL), A6HFJ3 (UniProtKB/TrEMBL)
RefSeq Acc Id:
NP_001382953 ⟸ NM_001396024
- UniProtKB:
A6HFJ3 (UniProtKB/TrEMBL)
Date
Current Symbol
Current Name
Previous Symbol
Previous Name
Description
Reference
Status
2012-10-02
Usp43
ubiquitin specific peptidase 43
Usp43_predicted
ubiquitin specific protease 43
Nomenclature updated to reflect human and mouse nomenclature
1299863 APPROVED
2009-02-27
Usp43_predicted
ubiquitin specific protease 43
Symbol and Name status set to provisional
70820 PROVISIONAL
